EWM27079.1, cds3596 (CDS) Nannochloropsis gaditana

Overview
NameEWM27079.1
Unique Namecds3596
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:795170..796624 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27079.1
ProductProtein of unknown function DUF4336
Orig transcript idgnl|cribi|Naga_100194g12.7131.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:795170..796624 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR001279Beta-lactamas-like
IPR025638DUF4336
Homology
BLAST of EWM27079.1 vs. NCBI_GenBank
Match: gi|585109254|gb|EWM27079.1| (Protein of unknown function DUF4336 [Nannochloropsis gaditana])

HSP 1 Score: 982.63 bits (2539), Expect = 0.000e+0
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0
Query:    1 MHKPPRYCPHVRAAFSAFVLLLFLSPLISAYKPSTGTKATIDPATRAPSRNRATPTTPVRNSKPNPLATLFEVYTRGSGDNAGVASDSPEEIRLRKERQYTLITGLPLKPYFERRTVRRQIAKDIWTFEQPQGFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAVPPGAPLPPDTPANRRKGWARMALQILFLGPTRFSTFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTWDFTTVLPAHFNAPAPGSPTALQDAFAFAYRLTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTEEYPEDDTAVLRFVNGFILKAGIANK 484
            MHKPPRYCPHVRAAFSAFVLLLFLSPLISAYKPSTGTKATIDPATRAPSRNRATPTTPVRNSKPNPLATLFEVYTRGSGDNAGVASDSPEEIRLRKERQYTLITGLPLKPYFERRTVRRQIAKDIWTFEQPQGFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAVPPGAPLPPDTPANRRKGWARMALQILFLGPTRFSTFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTWDFTTVLPAHFNAPAPGSPTALQDAFAFAYRLTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTEEYPEDDTAVLRFVNGFILKAGIANK
Sbjct:    1 MHKPPRYCPHVRAAFSAFVLLLFLSPLISAYKPSTGTKATIDPATRAPSRNRATPTTPVRNSKPNPLATLFEVYTRGSGDNAGVASDSPEEIRLRKERQYTLITGLPLKPYFERRTVRRQIAKDIWTFEQPQGFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAVPPGAPLPPDTPANRRKGWARMALQILFLGPTRFSTFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTWDFTTVLPAHFNAPAPGSPTALQDAFAFAYRLTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTEEYPEDDTAVLRFVNGFILKAGIANK 484          
BLAST of EWM27079.1 vs. NCBI_GenBank
Match: gi|553190216|ref|XP_005855149.1| (hypothetical protein NGA_2095500, partial [Nannochloropsis gaditana CCMP526] >gi|422293910|gb|EKU21210.1| hypothetical protein NGA_2095500, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query:    1 MHKPPRYCPHVRAAFSAFVLLLFLSPLISAYKPSTGTKATIDPATRAPSRNRATPTTPVRNSKPNPLATLFEVYTRGSGDNAGVASDSPEEIRLRKERQYTLITGLPLKPYFERRTVRRQIAKDIWTFEQPQGFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWD 310
            MHKPPRYCPHVRAAFSAFVLLLFLSPLISAYKPSTGTKATIDPATRAPSRNRATPTTPVRNSKPNPLATLFEVYTRGSGDNAGVASDSPEEIRLRKERQYTLITGLPLKPYFERRTVRRQIAKDIWTFEQPQGFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWD
Sbjct:    4 MHKPPRYCPHVRAAFSAFVLLLFLSPLISAYKPSTGTKATIDPATRAPSRNRATPTTPVRNSKPNPLATLFEVYTRGSGDNAGVASDSPEEIRLRKERQYTLITGLPLKPYFERRTVRRQIAKDIWTFEQPQGFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWD 313          
BLAST of EWM27079.1 vs. NCBI_GenBank
Match: gi|1072967509|ref|XP_018433826.1| (PREDICTED: uncharacterized protein LOC108806255 [Raphanus sativus])

HSP 1 Score: 285.419 bits (729), Expect = 6.708e-88
Identity = 170/406 (41.87%), Postives = 228/406 (56.16%), Query Frame = 0
Query:   95 RKERQYTLITGLP--LKPYFERRTVRRQIAK-DIWTFEQPQ--GFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAV---PPGAPLPP----DTPANRRKGWARMALQILFLGPTRF----STFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTWDFTTVLPAHFNAPAPGSPTALQDAFAFAYRLTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTEEYPEDDTAVLRFVNGFILKAGIANK 484
            R +R Y   TG P  L P+  RRT+R +  K  IW FEQ Q  GF +V+T IRMTVI+L  G LWVHAP+A T EC +L++ELG  V YIVLPT A+EHK+FVG F+R +P A+V+  P QWSWP+NLP  F         RA +  +     G   TPWA+EIE  V   P +GIGP  EV F HK SRTLLVTD V+++    PS +    + L AS  +  AV     G  +P     DTP  R+KGW RM LQILFLGP+      ++F  + ++L+VSP+++T V+SK+P+ + D++D IA+ W F  ++PAHF AP     +    AF F   L G R                 P L+    V+  +  GK    +P DD   L  ++ F++  G   K
Sbjct:   65 RSKRFYINFTGFPFPLGPFLNRRTIRTEAVKGSIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLIEELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEF-----FGIFRAKTIKD-----GDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPRKPPSSISS--ESLLASAKNGLAVKILSKGKQVPDDPVVDTPNTRQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDEIASEWRFKRIIPAHFEAPVNAGRSEFLAAFGFLDDLLGERYV------------NRPPSLS----VLFTSMMGKAASYFPPDDMRTLSSLDQFLVSVGAVKK 442          
BLAST of EWM27079.1 vs. NCBI_GenBank
Match: gi|695061297|ref|XP_009419076.1| (PREDICTED: uncharacterized protein LOC103999142 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 284.263 bits (726), Expect = 2.439e-87
Identity = 170/403 (42.18%), Postives = 229/403 (56.82%), Query Frame = 0
Query:   98 RQYTLITGLP--LKPYFERRTVRRQIAKD-IWTFEQPQ--GFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAV---PPGAPLPP----DTPANRRKGWARMALQILFLGPTRF----STFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTWDFTTVLPAHFNAPAPGSPTALQDAFAFAYRLTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTEEYPEDDTAVLRFVNGFILKAGIANK 484
            R Y   TG P  L P+  RRT+R +  KD IW FEQ Q  GF +V+T IRMTVI+L  G LWVHAP+A T EC  L+ EL   V YI+LPT A+EHK+FVG F+R +P A+V+  P QWSWPINLP  F     +   RA  D +       + TPWA+EIE  +   P +GIGP  EV F H+ SRTLLVTD V+Y+    P+ + +  D L AS  +  AV     G  +P     D   NR+KGW RM LQILFLGP+      ++F  + ++L+VSP+++T V+SK+P+ + D+VDRIA  W F  ++PAHF AP   S +    AF F   L G R +             + P L+L    +  +  GK    +P DD   L  ++ F++  G+  K
Sbjct:   69 RFYLNFTGFPFPLGPFLNRRTIRTEAVKDCIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIELLKELNAPVEYIILPTFAYEHKIFVGPFSRKFPRAQVWVAPRQWSWPINLPLEF---FGIFRARALRDED-------SSTPWADEIEQKILSSPEVGIGPYVEVAFYHRRSRTLLVTDAVIYVPRQPPACISK--DSLLASAKNGLAVKILSKGKEVPDEPVVDNKLNRQKGWERMVLQILFLGPSNLLEPTASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWVDRIAKDWPFRRIIPAHFAAPINASRSDFLAAFGFLDELLGDRFT-------------TRPSLSL----LFASVMGKAASYFPPDDMKTLSSLDQFLVSVGVVKK 442          
BLAST of EWM27079.1 vs. NCBI_GenBank
Match: gi|666671457|gb|AIG20409.1| (hypothetical protein BoB064L23.6 [Brassica oleracea var. alboglabra] >gi|772694855|gb|AJW87641.1| VG1a [Brassica oleracea var. alboglabra])

HSP 1 Score: 283.493 bits (724), Expect = 4.096e-87
Identity = 170/406 (41.87%), Postives = 228/406 (56.16%), Query Frame = 0
Query:   95 RKERQYTLITGLP--LKPYFERRTVRRQIAK-DIWTFEQPQ--GFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAV---PPGAPLPP----DTPANRRKGWARMALQILFLGPTRF----STFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTWDFTTVLPAHFNAPAPGSPTALQDAFAFAYRLTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTEEYPEDDTAVLRFVNGFILKAGIANK 484
            R ++ Y   TG P  L P+  RRT+R +  K  IW FEQ Q  GF +V+T IRMTVIRL  G LWVHAP+A T EC +L++ELG  V YIVLPT A+EHK+FVG F+R +P A+V+  P QWSWP+NLP  F         RA +  +     G   TPWA+EIE  V   P +GIGP  EV F HK SRTLLVTD V+++    PS +    + L AS  +  AV     G  +P     DTP  R+KGW RM LQILFLGP+      ++F  + ++L+VSP+++T V+SK+P+ + D++D IA+ W F  ++PAHF AP     +    AF F   L G R                 P L+    V+  +  GK    +P DD   L  ++ F++  G   K
Sbjct:   63 RSKQFYINFTGFPFPLGPFLNRRTIRTEAVKGSIWMFEQEQALGFSSVSTNIRMTVIRLKSGGLWVHAPIAPTKECIQLIEELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEF-----FGIFRAKTIKD-----GDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPRKPPSSISS--ESLLASAKNGLAVKILSKGKQVPDDPVVDTPNTRQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDEIASDWRFKRIIPAHFEAPVNAGRSEFLAAFGFLDDLLGERYV------------NRPPSLS----VLFTSLMGKAASYFPPDDMRTLSSLDQFLVSVGAVKK 440          
BLAST of EWM27079.1 vs. NCBI_GenBank
Match: gi|772694790|gb|AJW87636.1| (VG1a [Brassica oleracea var. italica])

HSP 1 Score: 283.493 bits (724), Expect = 4.916e-87
Identity = 169/406 (41.63%), Postives = 228/406 (56.16%), Query Frame = 0
Query:   95 RKERQYTLITGLP--LKPYFERRTVRRQIAK-DIWTFEQPQ--GFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAV---PPGAPLPP----DTPANRRKGWARMALQILFLGPTRF----STFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTWDFTTVLPAHFNAPAPGSPTALQDAFAFAYRLTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTEEYPEDDTAVLRFVNGFILKAGIANK 484
            R ++ Y   TG P  L P+  RRT+R +  K  IW FEQ Q  GF +V+T IRMTVI+L  G LWVHAP+A T EC +L++ELG  V YIVLPT A+EHK+FVG F+R +P A+V+  P QWSWP+NLP  F         RA +  +     G   TPWA+EIE  V   P +GIGP  EV F HK SRTLLVTD V+++    PS +    + L AS  +  AV     G  +P     DTP  R+KGW RM LQILFLGP+      ++F  + ++L+VSP+++T V+SK+P+ + D++D IA+ W F  ++PAHF AP     +    AF F   L G R                 P L+    V+  +  GK    +P DD   L  ++ F++  G   K
Sbjct:   63 RSKQFYINFTGFPFPLGPFLNRRTIRTEAVKGSIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLIEELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEF-----FGIFRAKTIKD-----GDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPKKPPSSISS--ESLLASAKNGLAVKILSKGKQVPNDPVVDTPNTRQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDEIASDWRFKRIIPAHFEAPINAGRSEFLAAFGFLDDLLGERYV------------NRPPSLS----VLFTSLMGKAASYFPPDDMRTLSSLDQFLVSVGAVKK 440          
BLAST of EWM27079.1 vs. NCBI_GenBank
Match: gi|1111023697|ref|XP_019262899.1| (PREDICTED: uncharacterized protein LOC109240687 [Nicotiana attenuata] >gi|1102291295|gb|OIT37491.1| hypothetical protein A4A49_15471 [Nicotiana attenuata])

HSP 1 Score: 283.108 bits (723), Expect = 6.324e-87
Identity = 172/418 (41.15%), Postives = 234/418 (55.98%), Query Frame = 0
Query:   83 GVASDSPEEIRLRKERQYTLITGLP--LKPYFERRTVRRQIAKD-IWTFEQPQ--GFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAV---PPGAPLPP----DTPANRRKGWARMALQILFLGPTRF----STFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTWDFTTVLPAHFNAPAPGSPTALQDAFAFAYRLTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTEEYPEDDTAVLRFVNGFILKAGIANK 484
            G    S E   +   R Y   TG P  L P+  RRT+R ++AKD IW FEQ Q  GF +V+T IRMTVI+L  G LWVHAP+A T EC +LV ELG  V YIVLPT A+EHK+FVG F+R +P A+V+  P QWSWP+NLP  F         R+ +  N+        TPWA++IE  V   P +GIGP  EV F HK SRTLLVTD V+++    P  + +  + L AS ++  AV     G  +      D   NR+KGW RM LQILFLGP+      ++F  + ++L+VSP+++T V+SK+P+ + D++D I   W FT ++PAHF AP   S + L  AFAF   L G R               + P ++L    +  +  GK    +P DD   L  ++ F++  G   K
Sbjct:   61 GSGKISEENNDVSGGRFYLNFTGFPFPLGPFLNRRTIRTEVAKDSIWLFEQEQALGFSSVSTNIRMTVIKLKSGELWVHAPIAPTKECIQLVKELGYPVKYIVLPTFAYEHKIFVGPFSRKFPKAEVWVAPRQWSWPLNLPLEF-----FGIFRSKTLKNED-----MSTPWADDIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPKTPPECISK--ESLLASAENGLAVKLLSKGKEVSDEPVVDNKINRQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDSIVRDWRFTRIIPAHFAAPINASRSDLLAAFAFLDDLLGER-------------YVTRPSISL----LFTSLLGKAASYFPPDDMRTLSSLDQFLVSVGAVKK 449          
BLAST of EWM27079.1 vs. NCBI_GenBank
Match: gi|922406062|ref|XP_013594421.1| (PREDICTED: uncharacterized protein LOC106302447 [Brassica oleracea var. oleracea])

HSP 1 Score: 281.952 bits (720), Expect = 1.743e-86
Identity = 168/406 (41.38%), Postives = 228/406 (56.16%), Query Frame = 0
Query:   95 RKERQYTLITGLP--LKPYFERRTVRRQIAK-DIWTFEQPQ--GFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAV---PPGAPLPP----DTPANRRKGWARMALQILFLGPTRF----STFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTWDFTTVLPAHFNAPAPGSPTALQDAFAFAYRLTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTEEYPEDDTAVLRFVNGFILKAGIANK 484
            R ++ Y   TG P  L P+  RRT+R +  K  IW FEQ Q  GF +V+T IRMTVI+L  G LWVHAP+A T EC +L++ELG  V YIVLPT A+EHK+FVG F+R +P A+V+  P QWSWP+NLP  F         RA +  +     G   TPWA+EIE  V   P +GIGP  EV F HK SRTLLVTD V+++    PS +    + L AS  +  AV     G  +P     DTP  R+KGW RM LQILFLGP+      ++F  + ++L+VSP+++T V+SK+P+ + D++D IA+ W F  ++PAHF AP     +    AF F   L G R                 P L+    ++  +  GK    +P DD   L  ++ F++  G   K
Sbjct:   63 RSKQFYINFTGFPFPLGPFLNRRTIRTEAVKGSIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLIEELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEF-----FGIFRAKTIKD-----GDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPRKPPSSISS--ESLLASAKNGLAVKILSKGKQVPNDPVVDTPNTRQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDEIASDWRFKRIIPAHFEAPVNAGRSEFLAAFGFLDDLLGERYV------------NRPPSLS----ILFTSLMGKAASYFPPDDMRTLSSLDQFLVSVGAVKK 440          
BLAST of EWM27079.1 vs. NCBI_GenBank
Match: gi|923926007|ref|XP_013731982.1| (PREDICTED: uncharacterized protein LOC106435621 [Brassica napus] >gi|674876553|emb|CDY55797.1| BnaCnng29080D [Brassica napus])

HSP 1 Score: 281.952 bits (720), Expect = 1.743e-86
Identity = 168/406 (41.38%), Postives = 228/406 (56.16%), Query Frame = 0
Query:   95 RKERQYTLITGLP--LKPYFERRTVRRQIAK-DIWTFEQPQ--GFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAV---PPGAPLPP----DTPANRRKGWARMALQILFLGPTRF----STFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTWDFTTVLPAHFNAPAPGSPTALQDAFAFAYRLTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTEEYPEDDTAVLRFVNGFILKAGIANK 484
            R ++ Y   TG P  L P+  RRT+R +  K  IW FEQ Q  GF +V+T IRMTVI+L  G LWVHAP+A T EC +L++ELG  V YIVLPT A+EHK+FVG F+R +P A+V+  P QWSWP+NLP  F         RA +  +     G   TPWA+EIE  V   P +GIGP  EV F HK SRTLLVTD V+++    PS +    + L AS  +  AV     G  +P     DTP  R+KGW RM LQILFLGP+      ++F  + ++L+VSP+++T V+SK+P+ + D++D IA+ W F  ++PAHF AP     +    AF F   L G R                 P L+    ++  +  GK    +P DD   L  ++ F++  G   K
Sbjct:   63 RSKQFYINFTGFPFPLGPFLNRRTIRTEAVKGSIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLIEELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEF-----FGIFRAKTIKD-----GDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPRKPPSSISS--ESLLASAKNGLAVKILSKGKQVPNDPVVDTPNTRQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDEIASDWRFKRIIPAHFEAPVNAGRSEFLAAFGFLDDLLGERYV------------NRPPSLS----ILFTSLMGKAASYFPPDDMRTLSSLDQFLVSVGAVKK 440          
BLAST of EWM27079.1 vs. NCBI_GenBank
Match: gi|923532266|ref|XP_013700315.1| (PREDICTED: uncharacterized protein LOC106404110 [Brassica napus])

HSP 1 Score: 281.952 bits (720), Expect = 2.241e-86
Identity = 168/406 (41.38%), Postives = 228/406 (56.16%), Query Frame = 0
Query:   95 RKERQYTLITGLP--LKPYFERRTVRRQIAK-DIWTFEQPQ--GFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAV---PPGAPLPP----DTPANRRKGWARMALQILFLGPTRF----STFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTWDFTTVLPAHFNAPAPGSPTALQDAFAFAYRLTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTEEYPEDDTAVLRFVNGFILKAGIANK 484
            R ++ Y   TG P  L P+  RRT+R +  K  IW FEQ Q  GF +V+T IRMTVI+L  G LWVHAP+A T EC +L++ELG  V YIVLPT A+EHK+FVG F+R +P A+V+  P QWSWP+NLP  F         RA +  +     G   TPWA+EIE  V   P +GIGP  EV F HK SRTLLVTD V+++    PS +    + L AS  +  AV     G  +P     DTP  R+KGW RM LQILFLGP+      ++F  + ++L+VSP+++T V+SK+P+ + D++D IA+ W F  ++PAHF AP     +    AF F   L G R                 P L+    ++  +  GK    +P DD   L  ++ F++  G   K
Sbjct:   68 RSKQFYINFTGFPFPLGPFLNRRTIRTEAVKGSIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLIEELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEF-----FGIFRAKTIKD-----GDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPRKPPSSISS--ESLLASAKNGLAVKILSKGKQVPNDPVVDTPNTRQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDEIASDWRFKRIIPAHFEAPINAGRSEFLAAFGFLDDLLGERYV------------NRPPSLS----ILFTSLMGKAASYFPPDDMRTLSSLDQFLVSVGAVKK 445          
The following BLAST results are available for this feature:
BLAST of EWM27079.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109254|gb|EWM27079.1|0.000e+0100.00Protein of unknown function DUF4336 [Nannochlorops... [more]
gi|553190216|ref|XP_005855149.1|0.000e+0100.00hypothetical protein NGA_2095500, partial [Nannoch... [more]
gi|1072967509|ref|XP_018433826.1|6.708e-8841.87PREDICTED: uncharacterized protein LOC108806255 [R... [more]
gi|695061297|ref|XP_009419076.1|2.439e-8742.18PREDICTED: uncharacterized protein LOC103999142 [M... [more]
gi|666671457|gb|AIG20409.1|4.096e-8741.87hypothetical protein BoB064L23.6 [Brassica olerace... [more]
gi|772694790|gb|AJW87636.1|4.916e-8741.63VG1a [Brassica oleracea var. italica][more]
gi|1111023697|ref|XP_019262899.1|6.324e-8741.15PREDICTED: uncharacterized protein LOC109240687 [N... [more]
gi|922406062|ref|XP_013594421.1|1.743e-8641.38PREDICTED: uncharacterized protein LOC106302447 [B... [more]
gi|923926007|ref|XP_013731982.1|1.743e-8641.38PREDICTED: uncharacterized protein LOC106435621 [B... [more]
gi|923532266|ref|XP_013700315.1|2.241e-8641.38PREDICTED: uncharacterized protein LOC106404110 [B... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3605rna3605Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications