EWM27090.1, cds3576 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27090.1 vs. NCBI_GenBank
Match: gi|585109267|gb|EWM27090.1| (transmembrane protein 167 precursor [Nannochloropsis gaditana]) HSP 1 Score: 324.709 bits (831), Expect = 1.486e-112 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 1 MILFVRTFDVKTAPKRIFEGELGVSFCNRLVRCMCGQTLRKATCLIVRPRTKWRQPSAEKNTHRRGQLVRLVWDIMSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFFKKN 158
MILFVRTFDVKTAPKRIFEGELGVSFCNRLVRCMCGQTLRKATCLIVRPRTKWRQPSAEKNTHRRGQLVRLVWDIMSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFFKKN
Sbjct: 1 MILFVRTFDVKTAPKRIFEGELGVSFCNRLVRCMCGQTLRKATCLIVRPRTKWRQPSAEKNTHRRGQLVRLVWDIMSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFFKKN 158
BLAST of EWM27090.1 vs. NCBI_GenBank
Match: gi|676383087|ref|XP_009034822.1| (hypothetical protein AURANDRAFT_23438 [Aureococcus anophagefferens] >gi|323454102|gb|EGB09972.1| hypothetical protein AURANDRAFT_23438 [Aureococcus anophagefferens]) HSP 1 Score: 91.6633 bits (226), Expect = 1.771e-21 Identity = 46/86 (53.49%), Postives = 56/86 (65.12%), Query Frame = 0
Query: 76 MSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRH------EGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFF 155
MSAIFDFSSL+TV+LL I TCTY+R R ++FD SAD + H G+ G CWKASRIGER S +V + MA H+L F
Sbjct: 1 MSAIFDFSSLVTVLLLIICTCTYVRAMRPSVFDGGLSADDLASPHLSYKRRSGIRGACWKASRIGERLSPYVSVVVAAMAFHILLF 86
BLAST of EWM27090.1 vs. NCBI_GenBank
Match: gi|635363886|emb|CCI47621.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 88.1965 bits (217), Expect = 4.053e-20 Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = 0
Query: 76 MSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFF 155
MSA+F LITV+LLFI TC+Y+R T+FD + +HEGL G CWKASRIGERKS +V A + MA+H LFF
Sbjct: 1 MSALFSLPGLITVILLFICTCSYIRAKFPTVFDR----NQQPGKHEGLSGLCWKASRIGERKSPYVAGALIVMAMHTLFF 76
BLAST of EWM27090.1 vs. NCBI_GenBank
Match: gi|301092809|ref|XP_002997256.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|301095583|ref|XP_002896891.1| conserved hypothetical protein [Phytophthora infestans T30-4] >gi|23394416|gb|AAN31496.1| unknown [Phytophthora infestans] >gi|262108538|gb|EEY66590.1| conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262111437|gb|EEY69489.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 87.8113 bits (216), Expect = 4.667e-20 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0
Query: 76 MSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFF 155
MSA+F L+TV+LLFI TCTY++ T+FD +HEGL G CWKASRIGERKS++V A V MAVH LFF
Sbjct: 1 MSALFSLQGLLTVILLFICTCTYIKMKFPTLFDRGQLP----GKHEGLGGLCWKASRIGERKSQYVASALVVMAVHTLFF 76
BLAST of EWM27090.1 vs. NCBI_GenBank
Match: gi|325187130|emb|CCA21670.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 87.8113 bits (216), Expect = 4.927e-20 Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = 0
Query: 76 MSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFF 155
MSA+F LITV+LLFI TC+Y+R T+FD + +HEGL G CWKASRIGERKS +V A + MA+H LFF
Sbjct: 1 MSALFSLPGLITVILLFICTCSYIRAKFPTVFDR----NQQPGKHEGLSGLCWKASRIGERKSPYVAGALILMALHTLFF 76
BLAST of EWM27090.1 vs. NCBI_GenBank
Match: gi|675213683|ref|XP_008915726.1| (hypothetical protein PPTG_19126 [Phytophthora parasitica INRA-310] >gi|566032350|gb|ETI55261.1| hypothetical protein F443_02055 [Phytophthora parasitica P1569] >gi|567968011|gb|ETK93165.1| hypothetical protein L915_03609 [Phytophthora parasitica] >gi|567996472|gb|ETL46582.1| hypothetical protein L916_03554 [Phytophthora parasitica] >gi|568025716|gb|ETL99720.1| hypothetical protein L917_03473 [Phytophthora parasitica] >gi|568058119|gb|ETM54764.1| hypothetical protein L914_01952 [Phytophthora parasitica] >gi|568084040|gb|ETM98985.1| hypothetical protein PPTG_19126 [Phytophthora parasitica INRA-310] >gi|570336047|gb|ETO83995.1| hypothetical protein F444_02066 [Phytophthora parasitica P1976] >gi|570960086|gb|ETP25065.1| hypothetical protein F441_02021 [Phytophthora parasitica CJ01A1] >gi|570996469|gb|ETP53068.1| hypothetical protein F442_02008 [Phytophthora parasitica P10297]) HSP 1 Score: 87.4261 bits (215), Expect = 6.677e-20 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0
Query: 76 MSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFF 155
MSA+F L+TV+LLFI TCTY++ T+FD +HEGL G CWKASRIGERKS++V A V MAVH LFF
Sbjct: 1 MSALFSLQGLLTVILLFICTCTYIKMKFPTLFDRGQLP----GKHEGLGGLCWKASRIGERKSQYVAGALVVMAVHTLFF 76
BLAST of EWM27090.1 vs. NCBI_GenBank
Match: gi|970649035|gb|KUF88410.1| (kish-A protein [Phytophthora nicotianae]) HSP 1 Score: 87.0409 bits (214), Expect = 1.076e-19 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0
Query: 76 MSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFF 155
MSA+F L+TV+LLFI TCTY++ T+FD +HEGL G CWKASRIGERKS++V A V MAVH LFF
Sbjct: 1 MSALFSLHGLLTVILLFICTCTYIKMKFPTLFDRGQLP----GKHEGLGGLCWKASRIGERKSQYVAGALVVMAVHTLFF 76
BLAST of EWM27090.1 vs. NCBI_GenBank
Match: gi|953493065|emb|CEG45011.1| (Uncharacterized conserved protein [Plasmopara halstedii]) HSP 1 Score: 87.4261 bits (215), Expect = 1.098e-19 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0
Query: 76 MSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFF 155
MSA+F+ L+TV+LLFI TCTY++ T+FD +HEGL G CWKASRIGERKS +V A V MAVH LFF
Sbjct: 20 MSALFNLQGLLTVILLFICTCTYIKMKFPTLFDRGQMP----GKHEGLGGLCWKASRIGERKSPYVAGALVLMAVHTLFF 95
BLAST of EWM27090.1 vs. NCBI_GenBank
Match: gi|673036598|ref|XP_008872260.1| (hypothetical protein H310_08335 [Aphanomyces invadans] >gi|574471826|gb|ETV98832.1| hypothetical protein H310_08335 [Aphanomyces invadans]) HSP 1 Score: 86.6557 bits (213), Expect = 1.498e-19 Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 0
Query: 76 MSAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFF 155
M+A+F+F+ ++T+VLL I TCTY+R TIFD +HEG G CWKASRIGERKSE+V + MAVH LFF
Sbjct: 1 MTALFNFTGMLTMVLLIICTCTYIRLKMPTIFDRGQLP----GKHEGFTGLCWKASRIGERKSEYVAALLLAMAVHRLFF 76
BLAST of EWM27090.1 vs. NCBI_GenBank
Match: gi|695466993|ref|XP_009539527.1| (hypothetical protein PHYSODRAFT_534932, partial [Phytophthora sojae] >gi|348665185|gb|EGZ05018.1| hypothetical protein PHYSODRAFT_534932, partial [Phytophthora sojae]) HSP 1 Score: 85.1149 bits (209), Expect = 5.106e-19 Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 0
Query: 77 SAIFDFSSLITVVLLFIVTCTYLRGFRSTIFDNAPSADGAINRHEGLLGFCWKASRIGERKSEWVGLACVGMAVHVLFF 155
SA+F L+TV+LLFI TCTY++ T+FD +HEGL G CWKASRIGERKS++V A V MAVH LFF
Sbjct: 1 SALFSLQGLLTVILLFICTCTYIKMKFPTLFDRGQLP----GKHEGLGGLCWKASRIGERKSQYVAGALVVMAVHTLFF 75 The following BLAST results are available for this feature:
BLAST of EWM27090.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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