EWM27089.1, cds3562 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27089.1 vs. NCBI_GenBank
Match: gi|585109266|gb|EWM27089.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 1300.8 bits (3365), Expect = 0.000e+0 Identity = 638/638 (100.00%), Postives = 638/638 (100.00%), Query Frame = 0
Query: 1 MGTENMNFPLSSDNRSCPPWSIPVPDARRRRPAPGSYLPNQLTWHIRSFKVGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTAMRA 638
MGTENMNFPLSSDNRSCPPWSIPVPDARRRRPAPGSYLPNQLTWHIRSFKVGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTAMRA
Sbjct: 1 MGTENMNFPLSSDNRSCPPWSIPVPDARRRRPAPGSYLPNQLTWHIRSFKVGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTAMRA 638
BLAST of EWM27089.1 vs. NCBI_GenBank
Match: gi|553193487|ref|XP_005855786.1| (abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526] >gi|422293272|gb|EKU20572.1| abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 802.357 bits (2071), Expect = 0.000e+0 Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0
Query: 1 MGTENMNFPLSSDNRSCPPWSIPVPDARRRRPAPGSYLPNQLTWHIRSFKVGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLL 387
MGTENMNFPLSSDNRSCPPWSIPVPDARRRRPAPGSYLPNQLTWHIRSFKVGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLL
Sbjct: 1 MGTENMNFPLSSDNRSCPPWSIPVPDARRRRPAPGSYLPNQLTWHIRSFKVGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLL 387
BLAST of EWM27089.1 vs. NCBI_GenBank
Match: gi|585106190|gb|EWM24668.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 499.59 bits (1285), Expect = 6.140e-168 Identity = 258/550 (46.91%), Postives = 368/550 (66.91%), Query Frame = 0
Query: 86 MGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTA 635
MG SGAGKTTLLEC++LR+R+F+G V ++ G++FT S LVHQ+E+L GF+T EHLLFH ARMS + ++I ARV V+++V L KC T+VGG +KGLSGGERKRL+IA ELLL PQ IFLDEP++ LDSVM+ + L+ L S RI+V A++H PSS++ F+HVLLLT DGRLA+HG A+ Y SS L P+ YNP+D ++L+ + PG A +E+ + N LV ++ AS + + +H+ + V G HAS+WTLF++NL R +Q R+ ++F L+G+V ++G FG LY+QQA S+WRNL+GLL+++VVA L+ L V++R PLDW +++REYF+G+NA GPYL+A+ + + P YGP LL+ LYWMTG+ + F+ FA AS +M V S SANP + L ILPAF+ PM++FSG LY+ +++P++L+WL +SIVNY F+AL+ Q +LP L + ++FV ++P+ +G ++ ML M F LTY+ L+LRLR A
Sbjct: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVV-ASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSS-LSYQCPENYNPSDFYLKLISATPG--ADPAQEKARMNQ-LVAAYNASDM---------VRKTPLAPDETHKQFQMVFG-HASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFA 535
BLAST of EWM27089.1 vs. NCBI_GenBank
Match: gi|585108726|gb|EWM26638.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 479.559 bits (1233), Expect = 2.792e-159 Identity = 263/596 (44.13%), Postives = 372/596 (62.42%), Query Frame = 0
Query: 40 NQLTWHIRSFKVGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTA 635
+ L WH+ ++ V P K+ + ++IL +AG++ G++TAIMG SG GKTTLLEC++LR+R+F G V ++G A GD FT S LVHQ+E+L GF+T E+L FHG ARM + +I+ R++ V+ D+ L KC TLVGG KKGLSGGERKRL IA E+LL P IFLDEP++ LDSVM+ + L+ LA RI V+A++H PSS+ LFSH++LLT DGR+A+HG + Y S+ LK P+ YNPAD ++L+ PG A +R D L +F S D L + +N HR L GV G AS +T +LN R L+ R+ L+G++ ++GL G +Y QQA +SWRNL+GLL++LVVA ++M L VI+R P +W +++RE ++G NA GPYL A LP AYGP LLV +YWMTG+ P+ A+L+FAG+ A + V SLS NPM+ + ILPAF+ PM++FSG LY +T+P +L+W+ +S++NY F+AL+ Q +LP + F++++ + G N+L L M+ LTY LT+RLR A
Sbjct: 24 HTLEWHVEAYMV------PAGKKG-EFRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRI-VLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSA-LKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRM---DLLNDAFQKS---DMRLMK------PLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLRNA 598
BLAST of EWM27089.1 vs. NCBI_GenBank
Match: gi|585110259|gb|EWM27919.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 474.552 bits (1220), Expect = 1.169e-156 Identity = 262/631 (41.52%), Postives = 381/631 (60.38%), Query Frame = 0
Query: 38 LPNQLTWHIRSFKVGSQRCWPWTK-----RSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMS--------------------------DRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAAS--AYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTA 635
+ ++L WH+ SFKV +R K + K+IL VAG +V GE+TAI+G SGAGKTTLLEC++LR+R F G V ++G+A G +FT SA VHQ ++L GFLT EHL FH ARMS ++ S + + RV VI V L KC TL+GG N KG+SGGERKRLTIATELL + IFLDEP++ LDSVM+ + L+ L RI V+AT+H PSS+ + LFS+++LLT DGRLA+ G + AL Y + L P YNPAD ++ LV ++PG +EE R+ D L ++A S +P LP ++ H++L V+GQ AS W F+LNL RG LQ +R+ ++ L+ V +IG FG LY+Q AAS+WRNL+GL+++ VV ++ L V++R P++W L++RE+ +GANA GPY++A+ LP +YGP+L+ + +YW TG+ P +L F + + ++ + S SANP++ + I+P F+TPM++FSG L + +++P +LAW+ +S+VNY F L+ Q +LP V +F+ +P +G N+ ML +T F LTY+ L +RLR +
Sbjct: 25 IQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRI-VIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPG--VPLQEELRRM-DALSLAYAQSFMKIQNP-LPA----------DDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRAS 640
BLAST of EWM27089.1 vs. NCBI_GenBank
Match: gi|553189117|ref|XP_005854935.1| (atp-binding cassette [Nannochloropsis gaditana CCMP526] >gi|422294123|gb|EKU21423.1| atp-binding cassette [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 474.167 bits (1219), Expect = 1.331e-156 Identity = 262/631 (41.52%), Postives = 381/631 (60.38%), Query Frame = 0
Query: 38 LPNQLTWHIRSFKVGSQRCWPWTK-----RSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMS--------------------------DRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAAS--AYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTA 635
+ ++L WH+ SFKV +R K + K+IL VAG +V GE+TAI+G SGAGKTTLLEC++LR+R F G V ++G+A G +FT SA VHQ ++L GFLT EHL FH ARMS ++ S + + RV VI V L KC TL+GG N KG+SGGERKRLTIATELL + IFLDEP++ LDSVM+ + L+ L RI V+AT+H PSS+ + LFS+++LLT DGRLA+ G + AL Y + L P YNPAD ++ LV ++PG +EE R+ D L ++A S +P LP ++ H++L V+GQ AS W F+LNL RG LQ +R+ ++ L+ V +IG FG LY+Q AAS+WRNL+GL+++ VV ++ L V++R P++W L++RE+ +GANA GPY++A+ LP +YGP+L+ + +YW TG+ P +L F + + ++ + S SANP++ + I+P F+TPM++FSG L + +++P +LAW+ +S+VNY F L+ Q +LP V +F+ +P +G N+ ML +T F LTY+ L +RLR +
Sbjct: 25 IQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRI-VIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPG--VPLQEELRRM-DALSLAYAQSFMKIQNP-LPA----------DDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRAS 640
BLAST of EWM27089.1 vs. NCBI_GenBank
Match: gi|553193491|ref|XP_005855787.1| (atp-binding cassette subfamily member group wbc protein 2, partial [Nannochloropsis gaditana CCMP526] >gi|422293273|gb|EKU20573.1| atp-binding cassette subfamily member group wbc protein 2, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 421.779 bits (1083), Expect = 2.407e-142 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
Query: 423 RNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTAMRA 638
RNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTAMRA
Sbjct: 1 RNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTAMRA 216
BLAST of EWM27089.1 vs. NCBI_GenBank
Match: gi|585109183|gb|EWM27013.1| (white [Nannochloropsis gaditana]) HSP 1 Score: 436.032 bits (1120), Expect = 6.196e-142 Identity = 241/578 (41.70%), Postives = 354/578 (61.25%), Query Frame = 0
Query: 67 KSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSR----RILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQ---GQHASAWTLFRLNLRRGLLQTSRNSLSFW-LYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQ-QSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTA 635
K IL D+AG++V GE TA+MG SGAGKTTL++C+ALR R F+G + +G + + DYFT + VHQ+E+ LT EHL+FH R+ +++ + RV VI +V L++C T++GG G KGLSGGERKRL+I TELL P+ IFLDEPT+ LDSVM V LL LA + R ++M IH PSS+++S FSHVLLL G +A+HGT Y S L +P YNPAD + +V +KPG E + K W+V++FA +R ++ E +H + GV G A ++N+ R + Q+SR+ + + L GM++ ++G+ FG L+ QA SSWRNL+G+++ALVVA+L +C + V L+ P++W + +REY+ GANA GPY + + + ++PF LLLV YWM+GLT S A+F+++ + L S + + S SA+P+L L I P TPM+LFSG LY+ +++P YL W+ IS+VNYGFAAL+ + SL +R + L F+ +D GA + L G+ + + +++ L LR+R A
Sbjct: 65 KQILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGG-GEFALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKS-LGYDVPPNYNPADFALEVVSAKPGA-----EVQGKTAVWIVENFA----------KRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLL-ILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYA 624
BLAST of EWM27089.1 vs. NCBI_GenBank
Match: gi|585106124|gb|EWM24607.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 350.903 bits (899), Expect = 2.229e-108 Identity = 222/607 (36.57%), Postives = 332/607 (54.70%), Query Frame = 0
Query: 42 LTWHIRSFKVGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSR-RILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSK--------PGG--GASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKA--CEENSHRSLRGVQGQHASAWTL-FRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQA-ASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLR 633
L W+I +++ ++ ++S+ ++L +AG++ G A+MG SG GKT+LL+CLALR+R F+G +T NG+A+ G YF + VHQ+E+ LTV EHL+FH +S S +E ARV V+E+V L+K +GG G G+SGGERKRL IATELL P+ + LDEPT+ LDSVM V LL+ +A+ R LV+A IH PSS++F+L SHV LLT+ G LA+ G LL+ R P +NPAD ++ L +K PGG G LV+S ++ + RD A N H+ + GVQG AS W + FR NL R L R + + ++ +GL FG LYFQQ + RN G L++L+V LL + V + P D+ +L+REY+AG N+ Y L + L P + +++ Y+M GL PS AF + + + A+ ++ + S SANP++ L ILP FITPM+LFSG LY+ ++P L W+ IS++NY FA ++ Q + R + F+ + L+ L +++++ L +R++
Sbjct: 75 LEWNISKYEIKLKK-----RKSL---TVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGG-GDLYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYR-CPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKL--VAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIKDSDFPGFLIALVSLSILYRVAAMGVLWVRVK 669
BLAST of EWM27089.1 vs. NCBI_GenBank
Match: gi|585102173|gb|EWM21831.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 304.679 bits (779), Expect = 2.407e-90 Identity = 194/584 (33.22%), Postives = 306/584 (52.40%), Query Frame = 0
Query: 67 KSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGD----PELP-ERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAAS--SWRNLVGLLYALVVALLYMCPLTVILRA-PLDWPLLLREYFAGANAAGPYLLAKILYELPFA-YGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQ---------SLLPAELRGVA-LKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLR 631
K IL++VAG G++ A+MG+SGAGK+T L+C++LR++QF G V NG+ Y+ + V+Q ++ +TV EHL FH RM+ ++ RV +V+ +V +S C +T++GGPG +G+SGGE+KRL TELL P +F DEPT+ LDS M V +R+LA +I +M IH PSSQ F LF+H+LLL GR+ ++G ++ Y SS L P +NPAD + + P ++ R ++ W + A G+ E+P E + + KA ++ HAS WT F ++R + R + M V+G+ GT+YF Q + S +N++GL + L++ M + +L+A P + + +RE +GAN Y LA+ L ELP P + A +Y M L P+ F + + L + ++ M+ S++++ + + P F+ PM LF+G L D T+P +L WL SI+ YG+ LI Q SL G A + +V P+ +G + +L + +IF L + FLT +
Sbjct: 146 KEILSNVAGSVKSGQMMAVMGSSGAGKSTFLDCVSLRNQQFSGNVYINGKPADEKYYFMTGFVYQEDLFIPTMTVREHLTFHAMVRMNSDIPVEKRLERVEDVLMEVAMSHCPETIIGGPGT--GYRGISGGEKKRLAFGTELLNNPSIVFADEPTSGLDSFMTRGVCMTMRELADDGKI-IMCVIHQPSSQTFDLFTHLLLLAK-GRIVYNGPMATLQSYFSS-LGVICPHFHNPADFFINQISIVPTEQEASMA--RLQSLWDAYENSNLAAGNMAWKAEMPAEILNLKHKAVS---------MKHFHASTWTQFYYTMKRNIQNEFRRATDVKAKFMNSLVMGMILGTIYFGQTDTQESAKNIMGLFF-LIIMFQTMVSMFGVLQAFPSECKVFIRENLSGANRVSSYFLARTLSELPSTIIYPSIFAAIVYGMADLQPTAGRFYFYIFTIILVANCATSVGYMISSMTSHEAVAYALAPLFLMPMALFAGLLLDLNTIPVWLRWLDFFSIIKYGYQLLIINQYTDRELSCVGSLFCRWKTGTAVMNYVGTSPQKVGETMGILVALIIIFRLLAFFFLTRK 712 The following BLAST results are available for this feature:
BLAST of EWM27089.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|