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Properties
| Property Name | Value |
|---|
| Product | abc subfamily abcg |
| Orig transcript id | gnl|cribi|Naga_100046g17.5128.mrna |
| Orig protein id | gnl|cribi|Naga_100046g17.5128 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:727314..729783 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3571 ID=rna3571|Name=rna3571|organism=Nannochloropsis gaditana|type=mRNA|length=1257bp
CTCCTTCTGCTTTCTATTATGTGGTACTTTACACGACTCCCTATTGTATT
CATGTATTCAGTTTAAAGCTTTTTCACTTTTTTTCCGTGCGCAAAGCGGT
CTTTACCTGTGTCATTGACTCTTCTTTATCCTTCCGTTTACCTTCTTGCA
GCCATGAGTTTAACTTCTGACGAAGCCTGGGAGAATCATTTCGATTCTTT
GTCTCCTGCCAGGAAGCGATACCACTACACGGTTCTTTCCGCACTTCTAT
TCGATCCAGAGGTAGAGCTGTGCGAGCTTGAAATGATTAAAGCTGACGCA
ATGAAAGCTGTAGCACGTCAAGCTCGCCGAGACCGCCTTCTTTTAAATGA
TGCACTCAAGAAGGAACACGAGCAGGAACTGACAGAAGAGATTGCAGTGA
TTGAAAAACGAGTGGAGGAAATGCAGGTTTGGGTCCAAAATGAAATTGCA
AGCTTGAAACCGGTAGCATTGCAGAAAGTTGTTAGCGAGTATGAGCACGC
GATGGAGCACTTTTATCTGCATGGAGACACAAATACAAAGGGAAGAAAGC
ACAGTTTCTTGCTTTTTGATAATGAAGCAGAAGAATTCGAGGAGATTGGG
AGTGAAAAGATGGATACGTATGATAGTGAGGAAAACGAATTAGATGGCCG
GGACTCTGCGTTGGCCGGAGTCGACGTGTCCGAACGGGAGACTGATATGA
CCGACTACACACTCTCCTCCCTTAATCCCCTTTCCACGAAGAGACTCGCT
AGCCCAATGACCACTTCAGAGTCTAATGGCGACTTCCTCCCTCCATTGAG
AAAGAAAAATACACGATCATCGACACTTGGTAATCTCAAGCAACGTGTTG
TAGAAGATCTAGTAGATGTGATGGTCGGTGCACCGGACAGAGGGGGGAGG
AGAAGCAGACTAGGATTAGAGCCAGAGGGGCTCGTGCAGGAGGTAATAGG
GTCCTTAAATCAAGCAATGCTGCAGAAACAGCTTTCAACGGCCTTGGCAG
CAGCGAAGCAAGAGTGTGAGCAAGAAAGACACCGCGCCTTGAATGATGAG
ATGGAAAAGAGGCTTAAAACGGCCCTTGAACAGATGCAATGCGAGATGTC
GGCCGAATTTGAAAATCATTTACAAGAGGAGAAGGAGAAAGTGAGGGTGC
TGACAGAGGTTGCGATGGACGAACAAAGAAGGGAGTTGGAGGAGAGACTT
AAAGAAGAGCATGCGAGAGAGATGGCGGAAGTGTTGCAAAAAGTAGGCTT
AGCTTGA back to topprotein sequence of rna3571 >rna3571-protein ID=rna3571-protein|Name=rna3571|organism=Nannochloropsis gaditana|type=polypeptide|length=638bp
MGTENMNFPLSSDNRSCPPWSIPVPDARRRRPAPGSYLPNQLTWHIRSFK
VGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECL
ALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGT
ARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGER
KRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMA
TIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAY
NPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGS
HRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYG
MVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPL
DWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPS
LAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFS
GFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVN
VDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTAMRA back to topmRNA from alignment at CM002461.1:727314..729783+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3571 ID=rna3571|Name=rna3571|organism=Nannochloropsis gaditana|type=mRNA|length=2470bp|location=Sequence derived from alignment at CM002461.1:727314..729783+ (Nannochloropsis gaditana)
AATGCGAGGGTACAGGACTTGCGGGGGTTCTAACGGCGCAGACGCAAGAT
GCGGGCAATAGCAAAGCTACAGGGTACAAGGATGAGTGCTATATTAGTTT
TACATGTTTGCTATCACACATAGGCCGGTCGTTCAAAACAGGATGCATTG
TGTGGTTATTTGCGGGCATCCAATCGCCAGGACCTGACCGTCAGACCTCA
AGAAAAAGAATCAAGCAAGATTACACAAGAGATTGGACCATCGTGCCCGT
TGGATGCGCTGCCCTGGCCCTTCCTTCAGACAAGCAGCGAAAGTGCAAGA
AAATAAACCATGGGAACAGAAAATATGAATTTCCCGCTGTCCTCGGACAA
TAGGTCGTGCCCGCCGTGGTCGATTCCAGTCCCAGacgcccgccgccgac
gccctGCTCCCGGTAGCTATCTTCCCAATCAACTCACATGGCATATACGC
TCTTTCAAAGTGGGAAGCCAGCGGTGTTGGCCGTGGACCAAAAGGAGTAT
TCAAAGGAAAAGTATTCTGACGGACGTGGCAGGCCAAAGCGTTGGGGGGG
AGATAACAGCTATTATGGGGGCCTCGGGCGCGGGGAAAACTACGTTGCTC
GAATGTCTGGCTTTGCGTTCCCGACAATTCAAGGGAAGGGTGACTTGGAA
TGGAGAGGCTGTCCGGGGAGACTACTTTACAGCCTCGGCGTTGGTTCACC
AGCGGGAGGTTCTCTGTGGGTTCCTGACAGTGGAGGAGCATCTCTTGTTC
CACGGGACGGCTCGAATGTCGGATAGGTTTAGCCCGAAAGAAATCGAGGC
AAGAGTTCGAAATGTTATAGAGGACGTGGGTTTAAGTAAGTGTCGGAAGA
CGCTGGTGGGAGGCCCGGGAGCGCCGCAGAACAAGAAGGGGCTGTCtggg
ggggagcggaaaCGCCTGACGATCGCTACGGAGCTCTTGCTTTGCCCGCA
AGCGATCTTTCTTGACGAGCCAACGACCTCGCTTGACTCTGTGATGGCGG
GGCACGTGGTGGCCCTTCTCCGTCAGCTGGCGCTCTCCCGGCGGATCCTG
GTAATGGCGACGAtccacgccccctcctcccagatcTTCAGCCTCTTCTC
GCACGTCTTGCTCCTGACCAACGACGGCCGCCTCGCTTTCCATGGGACGA
TCTCAAATGCTCTGCTTTATGCCAGCAGCTGTCTGAAGCGGCCCTTGCCC
GACGCCTACAATCCTGCCGACCATCTGGTGCGGCTGGTCGTCTCGaagcc
ggggggaggggcctcggcgagggaggagcggaggaaagagaacgaCTGGC
TCGTCCAGTCGTTCGCGGCATCGGCTTACGGGGACCCTGAGCTGCCAGAG
CGCGGGAGTCATCGAGACAAAGCCTGTGAGGAGAACAGCCATCGGAGTTT
GCGGGGGGTCCAGGGACAGCACGCCTCGGCGTGGAccctcttccgcctca
aCCTCCGGCGCGGCCTCCTGCAGACGTCCAGGAACAGCCTGAGCTTCTGG
CTGTACGGGATGGTCATGGGCGTGATAGGGCTTTGTTTCGGCACCCTCTA
CTTCCAGcaggccgcctccagctGGCGCAACCTGGTCGGCCTCCTCTACG
CCCTGGTCGTTGCCTTGCTCTACATGTGCCCCCTCACCGTCATCCTCCGC
GCGCCTCTGGACTGGCCCCTTCTGCTCCGGGAATACTTCGCGGGCGCCAA
CGCCGCAGGCCCATACCTGCTGGCCAAGATCCTCTACGAGCTCCCCTTCG
CGTACGgaccgctcctcctcgtcgccttcCTCTACTGGATGACGGgcctc
acgccctccctcgcggccTTCCTCCAATTCGCAGGCGTGGTGGCCCTGAC
GACCCAGGCCTCCTGCGCCATGGCCCTCATGGTCGGCTCCCTCTCGGCGA
ATCCGATGCTCACACTCggcatcctccccgccttcatcACCCCCATGGTG
CTCTTCTCCGGCTTCCTCTACGACACCGCcactctcccttcctacctggC
TTGGCTTCCGAAGATCTCCATCGTCAATTACGGATTTGCGGCCCTGATAA
CGCTGCAGCAATCCCTGCTTCCCGCGGAGTTGCGAGGAGTGGCGTTGAAG
TTCGTGAATGTGGACCCCGAGGCCTTGGGAGCTAACTTGTTAATGCTTAC
GGGGATGACGGTGATATTTTACGCCCTCACTTACATGTTCTTGACGCTGC
GGCTACGAACGGCTATGCGCGCCTGAGCTTAGAGGGTAGGCTGGTGCCGG
TGGGATGCTGTGCAGACAATGGCATGGAAATCCTCGGGAAGCCGTCGTGG
TAGGCTGGGGGCGAAGGATGTACATGAGGCGGCTCATTGATGAGGGAAGC
GACGGCGGCTTAcagggtggagggatgggacAAGAATAGAAATAAGGGAA
AGTAATTGCATAACCCGGTCTCCGACTCATTAACTGGAATGCAGCGGGGG
CTGTTACCATCCACCGCCGA back to topCoding sequence (CDS) from alignment at CM002461.1:727314..729783+ >rna3571 ID=rna3571|Name=rna3571|organism=Nannochloropsis gaditana|type=CDS|length=1917bp|location=Sequence derived from alignment at CM002461.1:727314..729783+ (Nannochloropsis gaditana)
ATGGGAACAGAAAATATGAATTTCCCGCTGTCCTCGGACAATAGGTCGTG
CCCGCCGTGGTCGATTCCAGTCCCAGacgcccgccgccgacgccctGCTC
CCGGTAGCTATCTTCCCAATCAACTCACATGGCATATACGCTCTTTCAAA
GTGGGAAGCCAGCGGTGTTGGCCGTGGACCAAAAGGAGTATTCAAAGGAA
AAGTATTCTGACGGACGTGGCAGGCCAAAGCGTTGGGGGGGAGATAACAG
CTATTATGGGGGCCTCGGGCGCGGGGAAAACTACGTTGCTCGAATGTCTG
GCTTTGCGTTCCCGACAATTCAAGGGAAGGGTGACTTGGAATGGAGAGGC
TGTCCGGGGAGACTACTTTACAGCCTCGGCGTTGGTTCACCAGCGGGAGG
TTCTCTGTGGGTTCCTGACAGTGGAGGAGCATCTCTTGTTCCACGGGACG
GCTCGAATGTCGGATAGGTTTAGCCCGAAAGAAATCGAGGCAAGAGTTCG
AAATGTTATAGAGGACGTGGGTTTAAGTAAGTGTCGGAAGACGCTGGTGG
GAGGCCCGGGAGCGCCGCAGAACAAGAAGGGGCTGTCtgggggggagcgg
aaaCGCCTGACGATCGCTACGGAGCTCTTGCTTTGCCCGCAAGCGATCTT
TCTTGACGAGCCAACGACCTCGCTTGACTCTGTGATGGCGGGGCACGTGG
TGGCCCTTCTCCGTCAGCTGGCGCTCTCCCGGCGGATCCTGGTAATGGCG
ACGAtccacgccccctcctcccagatcTTCAGCCTCTTCTCGCACGTCTT
GCTCCTGACCAACGACGGCCGCCTCGCTTTCCATGGGACGATCTCAAATG
CTCTGCTTTATGCCAGCAGCTGTCTGAAGCGGCCCTTGCCCGACGCCTAC
AATCCTGCCGACCATCTGGTGCGGCTGGTCGTCTCGaagccggggggagg
ggcctcggcgagggaggagcggaggaaagagaacgaCTGGCTCGTCCAGT
CGTTCGCGGCATCGGCTTACGGGGACCCTGAGCTGCCAGAGCGCGGGAGT
CATCGAGACAAAGCCTGTGAGGAGAACAGCCATCGGAGTTTGCGGGGGGT
CCAGGGACAGCACGCCTCGGCGTGGAccctcttccgcctcaaCCTCCGGC
GCGGCCTCCTGCAGACGTCCAGGAACAGCCTGAGCTTCTGGCTGTACGGG
ATGGTCATGGGCGTGATAGGGCTTTGTTTCGGCACCCTCTACTTCCAGca
ggccgcctccagctGGCGCAACCTGGTCGGCCTCCTCTACGCCCTGGTCG
TTGCCTTGCTCTACATGTGCCCCCTCACCGTCATCCTCCGCGCGCCTCTG
GACTGGCCCCTTCTGCTCCGGGAATACTTCGCGGGCGCCAACGCCGCAGG
CCCATACCTGCTGGCCAAGATCCTCTACGAGCTCCCCTTCGCGTACGgac
cgctcctcctcgtcgccttcCTCTACTGGATGACGGgcctcacgccctcc
ctcgcggccTTCCTCCAATTCGCAGGCGTGGTGGCCCTGACGACCCAGGC
CTCCTGCGCCATGGCCCTCATGGTCGGCTCCCTCTCGGCGAATCCGATGC
TCACACTCggcatcctccccgccttcatcACCCCCATGGTGCTCTTCTCC
GGCTTCCTCTACGACACCGCcactctcccttcctacctggCTTGGCTTCC
GAAGATCTCCATCGTCAATTACGGATTTGCGGCCCTGATAACGCTGCAGC
AATCCCTGCTTCCCGCGGAGTTGCGAGGAGTGGCGTTGAAGTTCGTGAAT
GTGGACCCCGAGGCCTTGGGAGCTAACTTGTTAATGCTTACGGGGATGAC
GGTGATATTTTACGCCCTCACTTACATGTTCTTGACGCTGCGGCTACGAA
CGGCTATGCGCGCCTGA back to top
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