Naga_100046g17, gene3440 (gene) Nannochloropsis gaditana

Overview
NameNaga_100046g17
Unique Namegene3440
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:727314..729783 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100046g17
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:727314..729783 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL133ngnoL133Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02930NO07G02930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3571rna3571-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3571rna3571Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3571

>rna3571-protein ID=rna3571-protein|Name=rna3571|organism=Nannochloropsis gaditana|type=polypeptide|length=638bp
MGTENMNFPLSSDNRSCPPWSIPVPDARRRRPAPGSYLPNQLTWHIRSFK
VGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECL
ALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGT
ARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGER
KRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMA
TIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAY
NPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGS
HRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYG
MVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPL
DWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPS
LAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFS
GFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVN
VDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTAMRA
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Synonyms
Publications