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Properties
| Property Name | Value |
|---|
| Product | actin-related protein 10 |
| Orig transcript id | gnl|cribi|Naga_100046g9.5154.mrna |
| Orig protein id | gnl|cribi|Naga_100046g9.5154 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:716457..718068 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3566 ID=rna3566|Name=rna3566|organism=Nannochloropsis gaditana|type=mRNA|length=867bp
ATGCGAATGAGAAAACCACTGTTGACGATTCTTCCGGACTCACGTTGTAA
TTTTCCGTTGACGATCATAACACTACACTCCTTAACACCATACCTTACTC
CGACGGCCTACCTGACTTTGTATGAAGAAGCCTTCGGTCCGGCGTCTGAT
GTATCCAATCTTACCGACAAGCGCTTTCAGTCGCACCTGTATTTGCCTTT
TGTCGTAGCCATCATGTCCACAGAGGCCATCCTGAAGCAAGTGCGGGCCG
TCCTGGGGCCTGACCTCCTTGTTTGGTTTACTGAGTGGCATGTCAAGCGA
CCGGCGTCTTCGAGTAAATATACCCCGCATCAAGACAGCACGTACGCCGG
TCTAGTACCGGCAGAAGACGTTGTCACGGTCTGGGTGGCCCTGACTGAGG
CGACCAGGACGAACGGGTGTCTTGAATTTGTGCCCATGACCGAGTATCAC
GGGGAGCAACTTCCCCACGTGGAGGAACCCGGCGACTCCACCAATCTGCT
GCTTCGAGGCCAGCGCATTGCCTCCGAACATCTTGACTTTACCGCCAAGG
CCGTGCCCGTAGAGCTTTGTCCGGGAGAGGCGACCATTCACGCCTTTCGT
TGTGTTCATGCGTCGGGTCCCAACCGCTCGGACGCGTCGCCGCGGGTGGG
CCTCGCGATCCGCTACATGAAGCCCAGTGTCAGACAGATGCAGGGAGGAC
GGCGGGAGGGGGCTATGCTGGTGAGCGGGCAAGACGACTTCGGGCATTTT
GACCTCCAGCCACTGCCCTCCGAGGCCTGGGACAGGGGAGGATTGGCCTT
GCATGCCCGGGAGATGGAAGCCATGCGTGTGAATTACATGGAGAGTCGGC
GAAAAGAAACAGGATGA back to topprotein sequence of rna3566 >rna3566-protein ID=rna3566-protein|Name=rna3566|organism=Nannochloropsis gaditana|type=polypeptide|length=435bp
MVKDTVVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQAASRGWGSEEW
TQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLR
VPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVV
GMGALTLLDRARELLESAATAKKEGGCLSGQRGDRLPLELLQDIVMRACF
VVGKEDFQVDAEPIAYEEKGFKLTLTPELRTTVAEGLFAESVDDGESLPI
AVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVR
YQELCPLLLGHQGTSRAHEALAPSAHAPSIPPPPTSSRASPPSPSALCLV
AGAALLAPRNVLAWVGGSIYAVLAETLPADASPFLFRGSYMTAVSTRGRS
SQDSGEGQGGRVPVLQEGLSTAGGRDVLSDGSRDV back to topmRNA from alignment at CM002461.1:716457..718068+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3566 ID=rna3566|Name=rna3566|organism=Nannochloropsis gaditana|type=mRNA|length=1612bp|location=Sequence derived from alignment at CM002461.1:716457..718068+ (Nannochloropsis gaditana)
TTCCTTTGTCAACAGGCTTGCCGCATACCTTTTGGTAGCATTGCCTATAA
AGAAGGTGCCCAGGAGCAGATAGGGCGCCATGGTCAAGGACACCGTGGTT
CTCGACCTGGGCAGGTACGCCAGGAAATGTTCGCATCGCTGTTGCACTTA
TCCGCGATCGGTCAGTCCACACTAGGTCTTTGCCTCCGCACTCACCACGT
TGTACGCCACCCGACAGTGCTATCATAAAATGTGGATTCGCAGGAGAAAG
CTCACCCCGACACCTGCTGCCATCCCCCTTGGATGATTGGAGCAGGCAAG
CTGCCTCCCGGGGATGGGGAAGTGAGGAATGGACGCAGTCCTTGGGCCCT
TTGCTGGTGAGACTGCTGGTGCATTGTTTGCATGTTCGCCCCTCCGAAAA
TAAAGTGCTCATTTGCGAGCCACTTGCGGGATCGACAACGTTTCGAGAAG
CTTTGGCTTACGTCTTATTCCAGTGGCTCCGGGTGCCGGCGATCGTGATG
GCTCCCTCGTTGGAAATGCCGTTGTACACTGCCGGTGCGGAGACAGGCTT
GGTGGTGGACGTAGGCTTTCGCGAATCCCACGTCTTGGCGGTTGTCTTCG
GGcggcccctccttcacacGTACGCAGTGGTAGGTATGGGGGCACTGACA
CTCTTGGATCGAGCGCGGGAGCTTCTTGAGTCGGCTGccacggcgaagaa
ggaagggggatgccTCTCCGGCCAAAGAGGCGACCGTCTCCCTCTAGAAC
TCCTGCAAGACATCGTAATGCGAGCATGCTTCGTTGTGGGTAAGGAGGAT
TTTCAAGTGGATGCCGAGCCCATCGCgtacgaagagaaggggTTTAAGCT
GACCCTTACCCCCGAGCTACGAACTACGGTGGCCGAAGGTCTCTTCGCGG
AATCCGTCGATGACGGGGAATCCCTCCCTATCGCGGTGCTGGAGTGTCTA
CGGAGATGCCCCAGAGACGTGCGACGCCTGCTGGCCAGTCATGTGCTGGT
GTCGGGGGGCGTGGCGATGCTGCCCGGCTTCTGTCCTCGTCTGGCGGAAG
AGGTGCAGCAAAGGGCCAGGGTGCGCGTCCGCTATCAAGAGCTTTGTCCG
CTCTTGCTTGGACACCAGGGCACCTCTCGAGCCCACGAagccctcgcgcc
ctccgcGCATGCGCCGTCcattcccccacccccaacGTCTTCTCGGgcat
ctcctcccagtcccagTGCCCTCTGCCTCGTCGCCGGAGCCGCTCTCTTG
GCTCCGCGCAACGTCTTGGCATGGGTCGGGGGCTCTATTTACGCGGTCCT
TGCAGAGACCCTTCCGGCAGACGCCTCCCCATTCCTGTTCCGCGGCTCCT
ACATGACCGCTGTCTCGACGCGAGGCAGGTCCTCGCAAGACtcaggggag
gggcagggaggccgtgTCCCTGTGCTCCAAGAGGGGCTGTCCacggcagg
gggaagagatgtcCTGAGCGACGGATCTCGGGACGTGTAATGGGCGATCG
GACTTGTAAATGAAAAAGCACGAGATGGAATGCCGGCGTAGGAGGCCCCA
TTGGACTCGCACCTGGCGGGACGCCGCGAGACGTTTATGCTCTGTGctat
ttcttctttttc back to topCoding sequence (CDS) from alignment at CM002461.1:716457..718068+ >rna3566 ID=rna3566|Name=rna3566|organism=Nannochloropsis gaditana|type=CDS|length=2616bp|location=Sequence derived from alignment at CM002461.1:716457..718068+ (Nannochloropsis gaditana)
ATGGTCAAGGACACCGTGGTTCTCGACCTGGGCAGTGCTATCATAAAATG
TGGATTCGCAGGAGAAAGCTCACCCCGACACCTGCTGCCATCCCCCTTGG
ATGATTGGAGCAGGCAAGCTGCCTCCCGGGGATGGGGAAGTGAGGAATGG
ACGCAGTCCTTGGGCCCTTTGCTGGTGAGACTGCTGGTGCATTGTTTGCA
TGTTCGCCCCTCCGAAAATAAAGTGCTCATTTGCGAGCCACTTGCGGGAT
CGACAACGTTTCGAGAAGCTTTGGCTTACGTCTTATTCCAGTGGCTCCGG
GTGCCGGCGATCGTGATGGCTCCCTCGTTGGAAATGCCGTTGTACACTGC
CGGTGCGGAGACAGGCTTGGTGGTGGACGTAGGCTTTCGCGAATCCCACG
TCTTGGCGGTTGTCTTCGGGcggcccctccttcacacGTACGCAGTGGTA
GGTATGGGGGCACTGACACTCTTGGATCGAGCGCGGGAGCTTCTTGAGTC
GGCTGccacggcgaagaaggaagggggatgccTCTCCGGCCAAAGAGGCG
ACCGTCTCCCTCTAGAACTCCTGCAAGACATCGTAATGCGAGCATGCTTC
GTTGTGGGTAAGGAGGATTTTCAAGTGGATGCCGAGCCCATCGCgtacga
agagaaggggTTTAAGCTGACCCTTACCCCCGAGCTACGAACTACGGTGG
CCGAAGGTCTCTTCGCGGAATCCGTCGATGACGGGGAATCCCTCCCTATC
GCGGTGCTGGAGTGTCTACGGAGATGCCCCAGAGACGTGCGACGCCTGCT
GGCCAGTCATGTGCTGGTGTCGGGGGGCGTGGCGATGCTGCCCGGCTTCT
GTCCTCGTCTGGCGGAAGAGGTGCAGCAAAGGGCCAGGGTGCGCGTCCGC
TATCAAGAGCTTTGTCCGCTCTTGCTTGGACACCAGGGCACCTCTCGAGC
CCACGAagccctcgcgccctccgcGCATGCGCCGTCcattcccccacccc
caacGTCTTCTCGGgcatctcctcccagtcccagTGCCCTCTGCCTCGTC
GCCGGAGCCGCTCTCTTGGCTCCGCGCAACGTCTTGGCATGGGTCGGGGG
CTCTATTTACGCGGTCCTTGCAGAGACCCTTCCGGCAGACGCCTCCCCAT
TCCTGTTCCGCGGCTCCTACATGACCGCTGTCTCGACGCGAGGCAGGTCC
TCGCAAGACtcaggggaggggcagggaggccgtgTCCCTGTGCTCCAAGA
GGGGCTGTCCacggcagggggaagagatgtcCTGAGCGACGGATCTCGGG
ACGTGTAAATGGTCAAGGACACCGTGGTTCTCGACCTGGGCAGTGCTATC
ATAAAATGTGGATTCGCAGGAGAAAGCTCACCCCGACACCTGCTGCCATC
CCCCTTGGATGATTGGAGCAGGCAAGCTGCCTCCCGGGGATGGGGAAGTG
AGGAATGGACGCAGTCCTTGGGCCCTTTGCTGGTGAGACTGCTGGTGCAT
TGTTTGCATGTTCGCCCCTCCGAAAATAAAGTGCTCATTTGCGAGCCACT
TGCGGGATCGACAACGTTTCGAGAAGCTTTGGCTTACGTCTTATTCCAGT
GGCTCCGGGTGCCGGCGATCGTGATGGCTCCCTCGTTGGAAATGCCGTTG
TACACTGCCGGTGCGGAGACAGGCTTGGTGGTGGACGTAGGCTTTCGCGA
ATCCCACGTCTTGGCGGTTGTCTTCGGGcggcccctccttcacacGTACG
CAGTGGTAGGTATGGGGGCACTGACACTCTTGGATCGAGCGCGGGAGCTT
CTTGAGTCGGCTGccacggcgaagaaggaagggggatgccTCTCCGGCCA
AAGAGGCGACCGTCTCCCTCTAGAACTCCTGCAAGACATCGTAATGCGAG
CATGCTTCGTTGTGGGTAAGGAGGATTTTCAAGTGGATGCCGAGCCCATC
GCgtacgaagagaaggggTTTAAGCTGACCCTTACCCCCGAGCTACGAAC
TACGGTGGCCGAAGGTCTCTTCGCGGAATCCGTCGATGACGGGGAATCCC
TCCCTATCGCGGTGCTGGAGTGTCTACGGAGATGCCCCAGAGACGTGCGA
CGCCTGCTGGCCAGTCATGTGCTGGTGTCGGGGGGCGTGGCGATGCTGCC
CGGCTTCTGTCCTCGTCTGGCGGAAGAGGTGCAGCAAAGGGCCAGGGTGC
GCGTCCGCTATCAAGAGCTTTGTCCGCTCTTGCTTGGACACCAGGGCACC
TCTCGAGCCCACGAagccctcgcgccctccgcGCATGCGCCGTCcattcc
cccacccccaacGTCTTCTCGGgcatctcctcccagtcccagTGCCCTCT
GCCTCGTCGCCGGAGCCGCTCTCTTGGCTCCGCGCAACGTCTTGGCATGG
GTCGGGGGCTCTATTTACGCGGTCCTTGCAGAGACCCTTCCGGCAGACGC
CTCCCCATTCCTGTTCCGCGGCTCCTACATGACCGCTGTCTCGACGCGAG
GCAGGTCCTCGCAAGACtcaggggaggggcagggaggccgtgTCCCTGTG
CTCCAAGAGGGGCTGTCCacggcagggggaagagatgtcCTGAGCGACGG
ATCTCGGGACGTGTAA back to top
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