EWM27115.1, cds3557 (CDS) Nannochloropsis gaditana

Overview
NameEWM27115.1
Unique Namecds3557
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:716536..716570 +
Alignment locationCM002461.1:716674..717946 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27115.1
Productactin-related protein 10
Orig transcript idgnl|cribi|Naga_100046g9.5154.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:716536..716570 +
CM002461.1supercontigCM002461.1:716674..717946 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR027127Arp10
IPR004000Actin
Homology
BLAST of EWM27115.1 vs. NCBI_GenBank
Match: gi|585109292|gb|EWM27115.1| (actin-related protein 10 [Nannochloropsis gaditana])

HSP 1 Score: 866.3 bits (2237), Expect = 0.000e+0
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0
Query:    1 MVKDTVVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQAASRGWGSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRARELLESAATAKKEGGCLSGQRGDRLPLELLQDIVMRACFVVGKEDFQVDAEPIAYEEKGFKLTLTPELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVRYQELCPLLLGHQGTSRAHEALAPSAHAPSIPPPPTSSRASPPSPSALCLVAGAALLAPRNVLAWVGGSIYAVLAETLPADASPFLFRGSYMTAVSTRGRSSQDSGEGQGGRVPVLQEGLSTAGGRDVLSDGSRDV 435
            MVKDTVVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQAASRGWGSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRARELLESAATAKKEGGCLSGQRGDRLPLELLQDIVMRACFVVGKEDFQVDAEPIAYEEKGFKLTLTPELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVRYQELCPLLLGHQGTSRAHEALAPSAHAPSIPPPPTSSRASPPSPSALCLVAGAALLAPRNVLAWVGGSIYAVLAETLPADASPFLFRGSYMTAVSTRGRSSQDSGEGQGGRVPVLQEGLSTAGGRDVLSDGSRDV
Sbjct:    1 MVKDTVVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQAASRGWGSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRARELLESAATAKKEGGCLSGQRGDRLPLELLQDIVMRACFVVGKEDFQVDAEPIAYEEKGFKLTLTPELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVRYQELCPLLLGHQGTSRAHEALAPSAHAPSIPPPPTSSRASPPSPSALCLVAGAALLAPRNVLAWVGGSIYAVLAETLPADASPFLFRGSYMTAVSTRGRSSQDSGEGQGGRVPVLQEGLSTAGGRDVLSDGSRDV 435          
BLAST of EWM27115.1 vs. NCBI_GenBank
Match: gi|961140492|ref|XP_014789270.1| (PREDICTED: actin-related protein 10-like [Octopus bimaculoides] >gi|918281360|gb|KOF64345.1| hypothetical protein OCBIM_22017473mg [Octopus bimaculoides])

HSP 1 Score: 161.384 bits (407), Expect = 1.264e-41
Identity = 107/321 (33.33%), Postives = 169/321 (52.65%), Query Frame = 0
Query:    6 VVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQAASRG-W---GSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRARELLESAATAKKEGGCLSGQRG--DRLPLELLQDIVMRACFVV-------------GKED-FQVDAEP--IAYEEKGFK-LTLTPELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVRYQE 303
            V+ D+G+A  KCGFAGE  PR+++PS + +  RQ  ++  W    S+E  ++L   L  L    + ++  + +V++CE L   T FRE LA VLFQ+  VP++   PS   PLYT G   GLV+DVG++E+ V+ +    P+L    ++ +    +    R LLE++     +    + +R   D L  E+L+DI +R CFV              GKED  ++   P  + Y   G   L ++  +R    E LF E  ++  SL   +L+ L +CP D RR LA +++++GG   LPGF  RL +E+  +   + RY E
Sbjct:   12 VIFDIGTAYTKCGFAGEMGPRYIIPSQVKN--RQGETQNVWDYKNSKELYENLKEFLKHLYFRHITMKSQDRRVVVCESLLCPTVFRETLAKVLFQYFEVPSVYFVPSHLTPLYTLGIGCGLVMDVGYKEASVIPIYEWTPVLKGLQILPLAGKAIHQNLRVLLENSNNEAGDDKAAAVKRPPVDDLTEEVLEDIKVRCCFVTNINRAKQILAVYCGKEDSSKLPPSPPDVEYPFNGDSFLRISGRVREEACEILF-EQDNEEMSLSTMILDSLIKCPIDTRRELAENLIITGGTCQLPGFYSRLQKELYDQLS-KPRYSE 328          
BLAST of EWM27115.1 vs. NCBI_GenBank
Match: gi|674266665|emb|CDI97718.1| (actin protein 10 [Echinococcus multilocularis])

HSP 1 Score: 156.377 bits (394), Expect = 1.301e-39
Identity = 134/427 (31.38%), Postives = 187/427 (43.79%), Query Frame = 0
Query:    3 KDTVVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQAASRGWGSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRARELLESAATAKKEGGCLSGQR--------GDRLPLELLQDIVMRACFVV--------------GKEDFQ----VDAEPIAYEE---------KGFKLTLTP-ELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVRYQELCPLLLGHQGTSRAHEAL--APSAHAPSIPPPPTSSRASPPSPSALCLVAGAALLAPRNVLAWVGGSIYAVLAETLPADASPFLFRGSYM 391
            K  ++ DLG+A +KCGFAGE+SPR +LPSP            + +    +SL  L  RL    L V P E +V+I E +   T FR+ +A VLF+   VP+I+ AP+  + L+T G  TGLV+D G+ E+ VL V  G  LL T+    +G+  +  R    +   A  + +G     Q+        GD     +L+DI+MRACFV               G++  +    V   P A E          +G +L   P  LR +  E LF     DG ++    L+CL  CP D R  L  +V+  GG  MLPGF  RL EE+Q                   +G      AL  A   H     PP                       A  N  AW+GG+I+  L E LP  +   L RG+Y+
Sbjct:   11 KTPIIFDLGAAYLKCGFAGEASPRFILPSPF-------IKMDFSNTNLFESLKGLFYRLCYRYLLVNPKERRVVIVESIMTPTHFRQTIADVLFRHFEVPSILFAPAHLVALFTLGISTGLVLDCGYSEALVLPVCEGFTLLSTWHSAHLGSRHIHKRLESQIREHAFVEDDGA--ERQKLSEVLDIGGDT--HAMLEDILMRACFVSPADRAALWQKWIEEGEKSEEGCPSVQPPPYATESFTCPLAGCGEGTRLVHIPSRLRESATEILFTPDNADGVTITTLFLDCLLMCPIDCRMSLVQNVVCIGGTTMLPGFVERLNEELQ-------------------KGLDLPQYALLAALKKHLKFHKPP-----------------------AKANYTAWLGGAIFGAL-ECLPGRS---LLRGAYL 380          
BLAST of EWM27115.1 vs. NCBI_GenBank
Match: gi|395504013|ref|XP_003756355.1| (PREDICTED: actin-related protein 10 [Sarcophilus harrisii])

HSP 1 Score: 155.992 bits (393), Expect = 2.034e-39
Identity = 123/401 (30.67%), Postives = 187/401 (46.63%), Query Frame = 0
Query:    3 KDTVVLDLGSAIIKCGFAGESSPRHLLPSPLDD----WSRQAASRGWGSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRAR-ELLESAATAKKEGGCLSGQR----GDRLPLELLQDIVMRACFV--------VGKEDFQVDAE--------PIAYEEKGFK-LTLTPELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVRYQELCPLLLGHQGTSRAHEALAPSAHAPSIPPPPTSSRASPPSPSALCLVAGAALLAPRNVLAWVGGSIYAVLAETL 377
            K  VV+DLG A  KCGFAGE+ PR ++PS +       S +       +EE    L   +  L    L V P + +V+I E +   + FRE L  VLF++  VP++++APS  M L T G  + +V+D G+RES VL +  G P+L+ +  + +G   +      +LLE       + G   GQ        +P  +L+DI +R CFV        +    F +D           + Y   G K L +   +R +V E LF E  ++ +S+   +L+ L +CP D R+ LA +++V GG AMLPGF  RL  E++     + +YQ+     LG + T R H           IPP                        A  N +AW+GG+I+  L + L
Sbjct:   13 KTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKKAGVSKSIKVVQYNINTEELYAYLKEFIHTLYFRHLLVNPRDRRVVIIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMSLLTLGINSAMVLDCGYRESMVLPIYEGIPILNCWGALPLGGKAIHKELETQLLEQCTV---DIGATKGQSLPSVMSSIPEVILEDIKVRTCFVSDLHRGLKIQAAKFNIDGNAERPSPPPEVDYPLDGEKILHVIGSIRDSVVEVLF-EQDNEEKSIATLILDSLMQCPIDTRKQLAENLVVIGGTAMLPGFLHRLMAEIRYLVE-KPKYQK----ALGTK-TFRIH-----------IPP------------------------AKPNCVAWLGGAIFGALQDIL 368          
BLAST of EWM27115.1 vs. NCBI_GenBank
Match: gi|597737058|ref|XP_007230773.1| (PREDICTED: actin-related protein 10 [Astyanax mexicanus])

HSP 1 Score: 154.451 bits (389), Expect = 6.836e-39
Identity = 121/403 (30.02%), Postives = 184/403 (45.66%), Query Frame = 0
Query:    3 KDTVVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQ----AASRGWGSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRARELLESAATAKKEGGCLSGQRGDRLPL-------ELLQDIVMRACFV--------VGKEDFQVD------AEP--IAYEEKGFK-LTLTPELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVRYQELCPLLLGHQGTSRAHEALAPSAHAPSIPPPPTSSRASPPSPSALCLVAGAALLAPRNVLAWVGGSIYAVLAETL 377
            K  VV+DLG+A  KCGFAGE+ PR ++PS +     Q           +EE   +L   +  L    L V P + +V+I E +   + FRE L+ V F+   VP+++ APS  M + T G  + LV+D G+ E+ VL V  G P+L  +  + MG   +      LL    T   + G      G  LP        E+++DI +R CFV        + +  F +D      A P  + Y   G K L +   +R ++AE LF E  ++ +S+   +L+ L +CP D R++L+ ++LV GG +MLPGF  RL  E+    R+ V   + C             +ALA  +     PP                        A  N  AW+GG+I+  L + L
Sbjct:   13 KTAVVIDLGAAYTKCGFAGETGPRFIIPSEIQRPGVQQPIKVVQYNINTEELYTNLKEFIHMLYFRHLLVNPRDRRVVIIESILCPSHFRETLSKVFFKHFEVPSVLFAPSHLMSIMTLGINSALVMDCGYTETLVLPVYEGIPILSAWEALPMGGKAIHKELDSLLTEQCTVDTDSGT-----GHSLPTVIGTVSEEVVEDIKVRTCFVSDLQRGLKIQEAKFNMDGTAERPAPPPDVDYPLDGEKILHIKGSIRDSIAEMLF-EQDNEEKSIATLILDTLVKCPIDTRKVLSENLLVIGGTSMLPGFLHRLLAEI----RLLVEKPKYC-------------DALATKSFRLHSPP------------------------AKPNCTAWLGGAIFGALQDIL 368          
BLAST of EWM27115.1 vs. NCBI_GenBank
Match: gi|1049214275|ref|XP_017538677.1| (PREDICTED: actin-related protein 10 [Pygocentrus nattereri])

HSP 1 Score: 154.451 bits (389), Expect = 7.732e-39
Identity = 121/400 (30.25%), Postives = 187/400 (46.75%), Query Frame = 0
Query:    3 KDTVVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQAASR----GWGSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRARELLESAATAKKEGGCLSGQRGDR----LPLELLQDIVMRACFV--------VGKEDFQVD------AEP--IAYEEKGFK-LTLTPELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVRYQELCPLLLGHQGTSRAHEALAPSAHAPSIPPPPTSSRASPPSPSALCLVAGAALLAPRNVLAWVGGSIYAVLAETL 377
            K  VV+DLG+A  KCGFAGE+ PR ++PS +     Q   +       +EE   +L   +  L    L V P + +V+I E +   + FRE L+ V F+   VP+++ APS  M + T G  + LV+D G+ E+ VL V  G P+L  +  + MG   +      LL    T   + G  +GQ        +P E+++DI +R CFV        + +  F +D      A P  + Y   G K L +   +R ++AE LF E  ++ +S+   VL+ L +CP D R++L+ +++V GG +MLPGF  RL  E+    R+ V   + C             +ALA  +     PP                        A  N  AW+GG+I+  L + L
Sbjct:   13 KTAVVIDLGAAYTKCGFAGETGPRFIIPSEIQRPGIQQPVKVVQFNINTEELYTNLKDFIHMLYFRHLLVNPRDRRVVIIESILCPSHFRETLSKVFFKHFEVPSVLFAPSHLMSVMTLGINSALVMDCGYTETLVLPVYEGIPVLSAWEALPMGGKAIHKELESLLTEQCTVDTDSG--TGQSLPTVLGPVPEEVVEDIKVRTCFVSDLQRGLKIQEAKFNMDGTAERPAPPPDVDYPLDGEKILHIKGSIRDSIAEMLF-EQDNEEKSIATLVLDTLVKCPIDTRKVLSENLVVIGGTSMLPGFLHRLLAEI----RLLVEKPKYC-------------DALATKSFRIHSPP------------------------AKPNCTAWLGGAIFGALQDIL 368          
BLAST of EWM27115.1 vs. NCBI_GenBank
Match: gi|674561277|emb|CDS24368.1| (actin protein 10 [Echinococcus granulosus])

HSP 1 Score: 154.066 bits (388), Expect = 8.374e-39
Identity = 110/325 (33.85%), Postives = 159/325 (48.92%), Query Frame = 0
Query:    3 KDTVVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQAASRGWGSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRARELLESAATAKKEGGCLSGQRGDRL------PLELLQDIVMRACFVV--------------GKEDFQ----VDAEPIAYEE---------KGFKLTLTP-ELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQ 293
            K  V+ DLG+A +KCGFAGE+SPR +LPSP            + +    +SL  L  RL    L V P E +V++ E +   T FR+ +A VLF+   VP+I+ AP+  + L+T G  TGLV+D G+ E+ VL V  G  LL T+    +G+  +  R    +   A  + +G     Q+  ++         +L+DI+MRACFV               G++  +    V   P A E          +G +L   P  LR +  E LF     DG ++    L+CL  CP D R  L  +V+  GG  MLPGF  RL EE+Q+
Sbjct:   11 KTPVIFDLGAAYLKCGFAGEASPRFILPSPF-------IKMDFFNTNLYESLKGLFYRLCYRYLLVNPKERRVVMVESIMTPTHFRQTIADVLFRHFEVPSILFAPAHLVALFTLGISTGLVLDCGYSEAIVLPVCEGFTLLSTWHSAHLGSRHIHKRLESQIREHAFVEDDGA--ERQKLSKVLDIGGDTHAMLEDILMRACFVSPADRAALWQKWIEEGEKSEEGCPSVQPPPYATESFTCPLAGCGEGTRLVHIPSRLRESATEILFTPDDADGVTITTLFLDCLVMCPIDCRMSLVQNVVCIGGTTMLPGFVERLNEELQK 326          
BLAST of EWM27115.1 vs. NCBI_GenBank
Match: gi|908411807|ref|XP_013067019.1| (PREDICTED: actin-related protein 10-like [Biomphalaria glabrata] >gi|908411809|ref|XP_013067020.1| PREDICTED: actin-related protein 10-like [Biomphalaria glabrata])

HSP 1 Score: 153.295 bits (386), Expect = 1.271e-38
Identity = 106/329 (32.22%), Postives = 166/329 (50.46%), Query Frame = 0
Query:    6 VVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQAASRGW---GSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRAR-ELLESAATAKKEGGCLS-GQRGDRLPLELLQDIVMRACFVV----GKE---------------------DFQVDAEPIAYEEKGFKLTLTPELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVRYQEL 304
            ++LD+GSA  KCG AG++ PR ++PS   +   Q  S+ W    ++E  + L  LL  L+   L V P + +V++ E L   T FR+ LA VLF+   V +I+ APS  + L T G +TGLV+DVG++ES V+ V  G P+L  +  + + +  +  R + +LLE    +  E          D L  ELL+DI +  CFV     G++                     D+Q+D         G  L ++  +R    E LF E  +D  S+   +++ +  CP D R+ LAS++LV+GG +M+PGF  RL  E+    +     Q+L
Sbjct:   15 IILDIGSAYTKCGLAGDTGPRCIIPSETKNPRNQQTSKIWDYSSTDELYEHLKELLYTLISRYLLVTPKDRRVVVIESLLCPTDFRDTLARVLFKHFEVASILFAPSHLLSLMTLGTKTGLVLDVGYQESFVVPVYEGIPILKGWRTIPLASKAIHSRIKSQLLEHGTVSTPEQKHQPVASMPDILTDELLEDIKVCCCFVTEYSRGQQIQEVTMRGGHANKLPPPPPDTDYQIDG--------GSVLNISGRIREHTCEVLF-EQDNDETSIATLLMDAIVACPIDTRKDLASNILVTGGTSMMPGFYHRLQLELSHLLKKPCYAQQL 334          
BLAST of EWM27115.1 vs. NCBI_GenBank
Match: gi|1083338464|ref|XP_018619607.1| (PREDICTED: actin-related protein 10 [Scleropages formosus] >gi|938054798|gb|KPP60284.1| actin-related protein 10-like [Scleropages formosus])

HSP 1 Score: 153.68 bits (387), Expect = 1.417e-38
Identity = 123/400 (30.75%), Postives = 187/400 (46.75%), Query Frame = 0
Query:    3 KDTVVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQAASR----GWGSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRARELLESAATAKKEGGCLSGQR----GDRLPLELLQDIVMRACFV--------VGKEDFQVD------AEP--IAYEEKGFKLT-LTPELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVRYQELCPLLLGHQGTSRAHEALAPSAHAPSIPPPPTSSRASPPSPSALCLVAGAALLAPRNVLAWVGGSIYAVLAETL 377
            K  VV+DLGS+  KCGFAGE+ PR ++PS +     Q   +       ++E   +L   +  L    L V P + +V+I E +   + FRE L  VLF+   VP+++ APS  M + T G  + LV+D G+ E+ VL V  G P+L  +  + MG   +      LL    T   E    +GQ        +P E+++DI +R CFV        + +  F ++      A P  + Y   G K+  +   +R +V E LF E  ++ +S+   VL+ L +CP D R++LA +++V GG AMLPGF  RL  E++  A  + RYQ++         T R H                     SPP              A  N  AW+GG+I+  L + L
Sbjct:   13 KTAVVIDLGSSYTKCGFAGETGPRCIIPSEVQKPGLQQPVKVVQYHINTDELYSNLKDFIHMLYFRHLLVNPRDRRVVIVESVLCPSHFRETLTKVLFKHFEVPSVLFAPSHLMSVLTLGINSALVMDCGYTETLVLPVYEGIPILSAWEALPMGGKAIHKELESLLVEQCTVDTESS--TGQSLPAVISSIPEEVVEDIKVRTCFVSDLQRGLKIQEAKFNLEGTAECPAPPPDVNYPLDGEKIIHIKGSIRDSVMEMLF-EQDNEEKSVATLVLDALVKCPIDTRKVLAENLVVIGGTAMLPGFLHRLLAEIRLLAE-KPRYQQVL-----SSRTFRVH---------------------SPP--------------AKPNCTAWLGGAIFGALQDIL 368          
BLAST of EWM27115.1 vs. NCBI_GenBank
Match: gi|927163438|ref|XP_013920234.1| (PREDICTED: actin-related protein 10 [Thamnophis sirtalis])

HSP 1 Score: 153.68 bits (387), Expect = 1.554e-38
Identity = 121/399 (30.33%), Postives = 185/399 (46.37%), Query Frame = 0
Query:    3 KDTVVLDLGSAIIKCGFAGESSPRHLLPSPLDDWSRQAASR----GWGSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRAR-ELLESAA--TAKKEGGCLSGQRGDRLPLELLQDIVMRACFV----------VGKEDFQVDAE------PIAYEEKGFK-LTLTPELRTTVAEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQQRARVRVRYQELCPLLLGHQGTSRAHEALAPSAHAPSIPPPPTSSRASPPSPSALCLVAGAALLAPRNVLAWVGGSIYAVLAETL 377
            K  VV+DLG+A  KCGFAGE+ PR +LPS +         R       +EE    L   +  L    L V P + +V+I E +   + FRE L  VLF++  VP+++ APS  M L T G  + +V+D G+ ES VL +  G P+L  +  + +G   +      +LLE +   T   +G  L+   G  +P ++++DI +R CFV            K D    AE       + Y   G K L +   +R +V E LF +  ++ +S+   +L+ L  CP D R+ LA +++V GG AMLPGF  RL  E++     + +Y+E+         T R H           +PP                        A  N +AW+GG+I+  L + L
Sbjct:   13 KTAVVIDLGAAFTKCGFAGETGPRCVLPSEIKKPGVSKPIRIVQYNINTEELYSYLKEFIHMLYFRHLLVNPRDRRVVIVESVLCPSHFRETLTKVLFKYFEVPSVLFAPSHLMSLLTLGINSAMVLDCGYTESLVLPIYEGIPVLSCWGALPLGGKAIHKELEYQLLEQSTVDTGATKGQSLTSVMGS-VPEDIVEDIKVRTCFVSDLQRGLKIQAAKFDMDDGAERPTPPPDVDYPLDGEKILHINGSIRDSVVEVLFVQD-NEEKSVATLILDSLMECPIDTRKQLAENLIVIGGTAMLPGFLHRLMAEIRYLVE-KPKYKEILA-----SKTFRVH-----------VPP------------------------AKPNCVAWLGGAIFGALQDIL 368          
The following BLAST results are available for this feature:
BLAST of EWM27115.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109292|gb|EWM27115.1|0.000e+0100.00actin-related protein 10 [Nannochloropsis gaditana... [more]
gi|961140492|ref|XP_014789270.1|1.264e-4133.33PREDICTED: actin-related protein 10-like [Octopus ... [more]
gi|674266665|emb|CDI97718.1|1.301e-3931.38actin protein 10 [Echinococcus multilocularis][more]
gi|395504013|ref|XP_003756355.1|2.034e-3930.67PREDICTED: actin-related protein 10 [Sarcophilus h... [more]
gi|597737058|ref|XP_007230773.1|6.836e-3930.02PREDICTED: actin-related protein 10 [Astyanax mexi... [more]
gi|1049214275|ref|XP_017538677.1|7.732e-3930.25PREDICTED: actin-related protein 10 [Pygocentrus n... [more]
gi|674561277|emb|CDS24368.1|8.374e-3933.85actin protein 10 [Echinococcus granulosus][more]
gi|908411807|ref|XP_013067019.1|1.271e-3832.22PREDICTED: actin-related protein 10-like [Biomphal... [more]
gi|1083338464|ref|XP_018619607.1|1.417e-3830.75PREDICTED: actin-related protein 10 [Scleropages f... [more]
gi|927163438|ref|XP_013920234.1|1.554e-3830.33PREDICTED: actin-related protein 10 [Thamnophis si... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3566rna3566Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications