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Properties
Property Name | Value |
Product | ribosomal protein s16 |
Orig transcript id | gnl|cribi|Naga_100010g88.6136.mrna |
Orig protein id | gnl|cribi|Naga_100010g88.6136 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002461.1 | supercontig | CM002461.1:610715..612298 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3529 ID=rna3529|Name=rna3529|organism=Nannochloropsis gaditana|type=mRNA|length=309bp ATGGTTTTTGATGACTGCGTGGGGAGACGGGCCTGGGTGGAGGTGACATG TCGTTCACATAGTCGTCCCATCATCGGTGCTACAGCGACGAACCTACACC GCATTGCTCCCTTTTTGCTGTGGACATTTCTTAAGAGTTTTGACGGTGCT TTGTTTCGAGCTTTTCTGTGCTTGGAAAAGAAATGGATTAACGGCTCGCC TGAAGCAATCCACAAACGGATAAATTCTTGGGTGAGCTCTCTCATTGCAA ACTCCAAGATACGGTCGTTGCGTTCTAAATTCCCTCTCAAACAAAATCGA GAGACGTGA back to topprotein sequence of rna3529 >rna3529-protein ID=rna3529-protein|Name=rna3529|organism=Nannochloropsis gaditana|type=polypeptide|length=144bp MAEELRSVQVFGRKKTATAVAFVKDGRGLINVNGAPIENVEPELLRFKIL EPVLLLNQETFAKVDIRVRVKGGGHTAQIYAIRQAISKGIVAFYQKYVDE AKKNELKETLLAYDRTLLVADPRHCEPKKFGGPSARARYQKSYR back to topmRNA from alignment at CM002461.1:610715..612298- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3529 ID=rna3529|Name=rna3529|organism=Nannochloropsis gaditana|type=mRNA|length=1584bp|location=Sequence derived from alignment at CM002461.1:610715..612298- (Nannochloropsis gaditana) AGGTCCCCTTCTTCACCTTGCCCACGACCCGGTCCTTGGTCTGGACACAG
CAAATCAGGCCAAGGCCATGGCCTGCCATGCTTGAGCAGGACGGCGTAGG
CCCCATTCGACGGGCCTTGGCTCACTTCAAACGGCATCCTGGGTGCATGG
CCATCCGTGTTCGACAGCCGTCATATGCTCATGCTCACCGCCCCATCCCT
TTAATTCGACGTCACAGAACGCATGGCAGAAGAGTTGCGATCGGTACAGG
TCTTTGGCCGCAAGGTATGTCGTGAGAGGGAAGCAAGTTTGGCGCTGGGA
TTAGTAGGCTAAGTTAAAGGAATGTGGAGATGTCTGCTGATGGCGGAAAG
GGAAAGTAATGGTTTCCAAGCACGTGACAGCAAGTAGGTCCAGTCGATCA
CTGCCGTTTAAGTTTTGTGCTTGCTCTTTAATGTAGCGAATACGTTTAGA
ATTCTCGACATGAGTAATTGGCTTGCATCCCATTGAGAGGAACATCGTGT
AGTGGGACAGAGACACGAGTCATGCCATTCTGTCTGTGACTGAACGACAG
CTTTCGGAGATGTTTTTGTGTTTTTCTCAAAGCTCTCCCCGCGTGTGGTG
TCTTGAGCCTGTTTTGGGCTGTGAACATGTAACGCCCTCAAATTTGTCCT
TCGCCTCGCAAAACATAGAAAACGGCTACAGCAGTTGCGTTTGTGAAAGA
CGGGCGTGGCCTCATCAACGTCAATGGAGCGCCCATTGAGAACGTGGAGC
CGGAGCTGCTTCGTTTCAAGATTTTGGAGCCCGTATTGCTACTGAATCAA
GAGACTTTCGCGAAGGTGGATATCCGTGTTCGTGTAAAGGGCGGCGGGCA
CACTGCTCAGATCTATGCGATTCGACAGGCGATCTCCAAGGGCATCGTGG
CTTTTTATCAAAAGTATGTGGATGAGGCGAAGAAGAACGAGTTAAAAGAA
ACCCTGCTTGCGTACGACAGGACCCTTCTAGTCGCCGATCCTCGGCACTG
TGAGCCCAAGAAGTTTGGGGGCCCATCTGCGCGGGCTCGGTATCAGAAGT
CCTACCGCTAGTTCCGGAGAGGACATGCACGAGATGGAAAGAAGGTGGTG
TAGAGATCCAGGGCATGGTAATGAGTGGAGTTCGATAGTGCACTGGTGTG
GGAGGCGACGGATCCTTGGACGCAGCTATTCACCTTAGTGAGAATGGTGT
CCAGACAGGGTTGGTGTGCGGGCGCCTGAGGGCGCAGGATTTCCGAGCAG
ACCGCCAGGAGTGGTGGGTGAGATTGCGCTGCCATTATTGGAAGAAAACA
ATTTGCGTTGAGCCACTTGATCACGTTCAAAACGTAAAAAGTGATTGTTG
TGTCTAGTCCGTTCGTCATGGTGGTCACGTCTCTCGATTTTGTTTCTTTG
GAGCTGGGTGAACACGTCATTAATCTCCTTGTTGAAGATTCATGCGACAA
AACGAGAGGGAATTTAGAACGCAACGACCGTATCTTGGAGTTTGCAATGA
GAGAGCTCACCCAAGAATTTATCCGTTTGTGGATTGCTTCAGGCGAGCCG
TTAATCCATTTCTTTTCCAAGCACAGAAAAGCTC back to topCoding sequence (CDS) from alignment at CM002461.1:610715..612298- >rna3529 ID=rna3529|Name=rna3529|organism=Nannochloropsis gaditana|type=CDS|length=870bp|location=Sequence derived from alignment at CM002461.1:610715..612298- (Nannochloropsis gaditana) AAAACGGCTACAGCAGTTGCGTTTGTGAAAGACGGGCGTGGCCTCATCAA CGTCAATGGAGCGCCCATTGAGAACGTGGAGCCGGAGCTGCTTCGTTTCA AGATTTTGGAGCCCGTATTGCTACTGAATCAAGAGACTTTCGCGAAGGTG GATATCCGTGTTCGTGTAAAGGGCGGCGGGCACACTGCTCAGATCTATGC GATTCGACAGGCGATCTCCAAGGGCATCGTGGCTTTTTATCAAAAGTATG TGGATGAGGCGAAGAAGAACGAGTTAAAAGAAACCCTGCTTGCGTACGAC AGGACCCTTCTAGTCGCCGATCCTCGGCACTGTGAGCCCAAGAAGTTTGG GGGCCCATCTGCGCGGGCTCGGTATCAGAAGTCCTACCGCTAGATGGCAG AAGAGTTGCGATCGGTACAGGTCTTTGGCCGCAAGAAAACGGCTACAGCA GTTGCGTTTGTGAAAGACGGGCGTGGCCTCATCAACGTCAATGGAGCGCC CATTGAGAACGTGGAGCCGGAGCTGCTTCGTTTCAAGATTTTGGAGCCCG TATTGCTACTGAATCAAGAGACTTTCGCGAAGGTGGATATCCGTGTTCGT GTAAAGGGCGGCGGGCACACTGCTCAGATCTATGCGATTCGACAGGCGAT CTCCAAGGGCATCGTGGCTTTTTATCAAAAGTATGTGGATGAGGCGAAGA AGAACGAGTTAAAAGAAACCCTGCTTGCGTACGACAGGACCCTTCTAGTC GCCGATCCTCGGCACTGTGAGCCCAAGAAGTTTGGGGGCCCATCTGCGCG GGCTCGGTATCAGAAGTCCTACCGCTAGATGGCAGAAGAGTTGCGATCGG TACAGGTCTTTGGCCGCAAG back to top
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