EWM27192.1, cds3506 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27192.1 vs. NCBI_GenBank
Match: gi|585109372|gb|EWM27192.1| (microtubule-associated protein rp eb family member 1 [Nannochloropsis gaditana]) HSP 1 Score: 720.694 bits (1859), Expect = 0.000e+0 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0 Query: 1 MKQKPRLCRLCSSPGKHFSIYQRFKQSKKGYKMTTSIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV 346 MKQKPRLCRLCSSPGKHFSIYQRFKQSKKGYKMTTSIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV Sbjct: 1 MKQKPRLCRLCSSPGKHFSIYQRFKQSKKGYKMTTSIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV 346
BLAST of EWM27192.1 vs. NCBI_GenBank
Match: gi|585109373|gb|EWM27193.1| (microtubule-associated protein rp eb family member 1 [Nannochloropsis gaditana]) HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0 Query: 37 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV 346 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV Sbjct: 19 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV 328
BLAST of EWM27192.1 vs. NCBI_GenBank
Match: gi|673029466|ref|XP_008868694.1| (hypothetical protein H310_05695 [Aphanomyces invadans] >gi|574475089|gb|ETW02089.1| hypothetical protein H310_05695 [Aphanomyces invadans]) HSP 1 Score: 256.529 bits (654), Expect = 1.352e-80 Identity = 142/293 (48.46%), Postives = 185/293 (63.14%), Query Frame = 0 Query: 36 SIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELN-NPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSD 327 SIGMMD YFVGRKEI+DW+N T L LTKVEQT +GAVACQ+LD IYPGKVP++KV+W A DYE++ NYK+LQ AF L+ID+ + V+KL+R KYQDNLEFMQW+KRFYELN + DYDP+ R KG GG A T A + +T T + + K RP +SS G A+ G ++ R + +AA+ E L R+ E LA+ N+ ++ IEGLEKERDFYF KL +E MLQE DE+ + + +I++IF+VLYA E + D Sbjct: 7 SIGMMDGAYFVGRKEILDWVNATCGLGLTKVEQTCTGAVACQILDAIYPGKVPMSKVDWSANKDYEYIQNYKILQKAFATLKIDRFIEVDKLIRGKYQDNLEFMQWYKRFYELNAGGSSDYDPIATRE--KGKGGAAYT---AKYKYAGAT-TAPSSAPAAKKRP--------VAASSKAGSAK---PPGAPVSVEKEKSIRRTSDSAASNKEIEDLTRENEELAEANSICRSQIEGLEKERDFYFGKLRDIESMLQE----LDES---QHTDIIKKIFEVLYAAEGDFSVPD 275
BLAST of EWM27192.1 vs. NCBI_GenBank
Match: gi|325189034|emb|CCA23562.1| (microtubule associated protein EB1 putative [Albugo laibachii Nc14]) HSP 1 Score: 252.292 bits (643), Expect = 7.569e-79 Identity = 139/304 (45.72%), Postives = 182/304 (59.87%), Query Frame = 0 Query: 36 SIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGA-------GGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAEN--LAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDE 330 SIGMMD YFVGRKEI+DWIN+T NLTKVEQT +GA+ACQ+LD IYPGKVP++KV+W A DYE++ NYK+LQ FT L+IDK++ V++L+R KYQDNLEFMQWFK+F+ELN YDPV R GKG G +I P+ A N+ SN L+ R+ GS +S R G A S + +TA+ + KA N L EN L+A + GLE ERDFYF KL +E +LQ + E + L++++FK+LYATE+ G++ DE Sbjct: 7 SIGMMDGAYFVGRKEILDWINQTCHTNLTKVEQTCTGAIACQILDSIYPGKVPMSKVDWSANKDYEYIQNYKVLQKCFTNLKIDKYVDVDRLIRGKYQDNLEFMQWFKKFHELNASGQSYDPVAQREKGKGGIQFSNKHRGGTSSIAPSPA---------NIISNDLR----RRNAGSHVARNSFPSRTRTNRPPGAPTAMESQNAVTMASTASIVEKEKQLAEFKAANALLTDENGELRAAVTGLETERDFYFGKLRDIEILLQNIEDG-------EQNALVQDLFKLLYATED--GVAPMDE 288
BLAST of EWM27192.1 vs. NCBI_GenBank
Match: gi|698801418|ref|XP_009833738.1| (hypothetical protein H257_09273 [Aphanomyces astaci] >gi|574111330|gb|ETV76826.1| hypothetical protein H257_09273 [Aphanomyces astaci]) HSP 1 Score: 251.521 bits (641), Expect = 1.158e-78 Identity = 146/298 (48.99%), Postives = 189/298 (63.42%), Query Frame = 0 Query: 36 SIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELN-NPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGA---RDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCD 329 SIGMMD YFVGRK+I+DW+N T L+LTKVEQT +GAVACQ+LD IYPGKV ++KV+W A DYE++ NYK+LQ FT L+ID+H+ V+KL+R KYQDNLEFMQW+KRFYELN A DYDP+ R KG GG A + A F +T K RP + S++ +S+ GA +KE +GG TS S AA++ E +R+ E L + N L+ IEGLEKERDFYF KL +E MLQE DE+ + + +I++IF+VLYA E + D D Sbjct: 7 SIGMMDGAYFVGRKDILDWVNATCALSLTKVEQTCTGAVACQILDAIYPGKVQMSKVDWSANKDYEYIQNYKILQKTFTTLKIDRHIEVDKLIRGKYQDNLEFMQWYKRFYELNAGGAGDYDPIAQRE--KGKGGAAYS---AKYKFAGATAG---APAPAKKRP----VASTSKASAKPPGAPVSVEKEKAGGFRRTSDS---------AASSKELEESIRENEELNEANGILRGQIEGLEKERDFYFGKLRDIESMLQE----LDES---QHTDVIKKIFEVLYAAEGDFSVPDDD 276
BLAST of EWM27192.1 vs. NCBI_GenBank
Match: gi|635363171|emb|CCI48265.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 251.906 bits (642), Expect = 1.385e-78 Identity = 142/322 (44.10%), Postives = 187/322 (58.07%), Query Frame = 0 Query: 36 SIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGA--------GGPARTIPPAAAPFCSSTR---TG--NMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAEN--LAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAP 342 SIGMMD YFVGRKEI+DWIN+T NLTKVEQT +GA+ACQ+LD +YPGKVP++KV+W A DYE++ NYK+LQ FT L+IDK++ V++L+R KYQDNLEFMQWFK+FYELN L YDPV R GKG GG + P A+ R TG N+ N+L SR R G + S + TA+ A + KA N L EN L+A + GLE ERDFYF KL +E +LQ + E + L++++FK+LYATE+ G++ DE C++ + +P Sbjct: 7 SIGMMDGAYFVGRKEILDWINQTCHTNLTKVEQTCTGAIACQILDSLYPGKVPMSKVDWSANKDYEYIQNYKVLQKCFTNLKIDKYVDVDRLIRGKYQDNLEFMQWFKKFYELNATGLSYDPVAQREKGKGGVQFSNKHRGGTSSMAPSPASTTSHDLRRRNTGSCNIARNNLPSR------------------TRTNRPPGAPVMMESQNVVTMANTASLAEKEKQLTEIKAANELLTDENGELRAAVTGLETERDFYFGKLRDIEILLQNIEDG-------EQNPLVQDLFKLLYATED--GVTPMDE-CTDVNLQLASP 300
BLAST of EWM27192.1 vs. NCBI_GenBank
Match: gi|669157856|ref|XP_008614490.1| (hypothetical protein SDRG_10284 [Saprolegnia diclina VS20] >gi|530733846|gb|EQC32088.1| hypothetical protein SDRG_10284 [Saprolegnia diclina VS20]) HSP 1 Score: 246.514 bits (628), Expect = 1.313e-76 Identity = 137/286 (47.90%), Postives = 178/286 (62.24%), Query Frame = 0 Query: 36 SIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPAL-DYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATE 320 +IGMMD YFVGRKEI+DW+N T L LTKVEQT +GAVACQ+LD IYPGKVP++KV+W A DYE+++NYK+LQ FT L+ID+H+ V+KL+R KYQDNLEFMQW+KRFYELN DYDP+ R KG GG A + + + S+ P R + SST SS+ A AI++ + + A++ DE L ++ E L++ N L+ IEGLEKERDFYF KL +E MLQE DE E + ++ IF +LYA E Sbjct: 6 AIGMMDGAYFVGRKEILDWVNGTCGLGLTKVEQTCTGAVACQILDAIYPGKVPMSKVDWSANKDYEYINNYKILQKVFTNLKIDRHIEVDKLIRGKYQDNLEFMQWYKRFYELNGGGTNDYDPIAQRE--KGKGGAAYSTKFKFTGGGGGSSASSTTSSQAAPAPKRRPVASSTKSSAKPPSAPSSIEKERAISS------KRQSEASSNAEVDE-LTKENEALSEANGILRGQIEGLEKERDFYFGKLRDIELMLQE----LDET---EHTETVKSIFNILYAAE 275
BLAST of EWM27192.1 vs. NCBI_GenBank
Match: gi|635363170|emb|CCI48264.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 245.743 bits (626), Expect = 2.541e-76 Identity = 139/319 (43.57%), Postives = 184/319 (57.68%), Query Frame = 0 Query: 39 MMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGA--------GGPARTIPPAAAPFCSSTR---TG--NMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAEN--LAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAP 342 MMD YFVGRKEI+DWIN+T NLTKVEQT +GA+ACQ+LD +YPGKVP++KV+W A DYE++ NYK+LQ FT L+IDK++ V++L+R KYQDNLEFMQWFK+FYELN L YDPV R GKG GG + P A+ R TG N+ N+L SR R G + S + TA+ A + KA N L EN L+A + GLE ERDFYF KL +E +LQ + E + L++++FK+LYATE+ G++ DE C++ + +P Sbjct: 1 MMDGAYFVGRKEILDWINQTCHTNLTKVEQTCTGAIACQILDSLYPGKVPMSKVDWSANKDYEYIQNYKVLQKCFTNLKIDKYVDVDRLIRGKYQDNLEFMQWFKKFYELNATGLSYDPVAQREKGKGGVQFSNKHRGGTSSMAPSPASTTSHDLRRRNTGSCNIARNNLPSR------------------TRTNRPPGAPVMMESQNVVTMANTASLAEKEKQLTEIKAANELLTDENGELRAAVTGLETERDFYFGKLRDIEILLQNIEDG-------EQNPLVQDLFKLLYATED--GVTPMDE-CTDVNLQLASP 291
BLAST of EWM27192.1 vs. NCBI_GenBank
Match: gi|813149483|ref|XP_012200388.1| (hypothetical protein SPRG_05713 [Saprolegnia parasitica CBS 223.65] >gi|641534877|gb|KDO28807.1| hypothetical protein SPRG_05713 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 244.973 bits (624), Expect = 6.361e-76 Identity = 133/283 (47.00%), Postives = 176/283 (62.19%), Query Frame = 0 Query: 36 SIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPAL-DYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLY 317 +IGMMD YFVGRKEI+DW+N T L LTKVEQT +GAVACQ+LD IYPGKVP++KV+W A DYE+++NYK+LQ FT L+ID+H+ V+KL+R KYQDNLEFMQW+KRFYELN DYDP+ R GKG + + + + S+ P R + SST SS+ A AI++ + + A++ DE L ++ E L++ N L+ IEGLEKERDFYF KL +E MLQE DE+ E + ++ IF +LY Sbjct: 6 AIGMMDGAYFVGRKEILDWVNATCGLGLTKVEQTCTGAVACQILDAIYPGKVPMSKVDWSANKDYEYINNYKILQKVFTNLKIDRHIEVDKLIRGKYQDNLEFMQWYKRFYELNGGGTNDYDPIAQREKGKGGAAYSTKFKFTGSGGGGGSSASSTASSQAAPAPKRRPVASSTKSSAKPPSAPSSIEKERAISS------KRQSEASSNAEVDE-LTKENEALSEANGILRGQIEGLEKERDFYFGKLRDIELMLQE----LDES---EHTETVKSIFNILY 274
BLAST of EWM27192.1 vs. NCBI_GenBank
Match: gi|301098790|ref|XP_002898487.1| (microtubule -associated protein EB1 [Phytophthora infestans T30-4] >gi|262104912|gb|EEY62964.1| microtubule -associated protein EB1 [Phytophthora infestans T30-4]) HSP 1 Score: 242.276 bits (617), Expect = 9.760e-75 Identity = 138/298 (46.31%), Postives = 182/298 (61.07%), Query Frame = 0 Query: 36 SIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGA-------GGPARTIPPAAAPF------CSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATE 320 S+ +MD YFVGRKEI+DWIN +NL+KVEQT +GAVACQ+LD +YPGKV ++KV+W A DYE++ NYK+LQ AF +L+IDKH+ V++LVR KYQDNLEFMQWFK FYE N YDP+ R GKG GG A + P AAP +++R G P + S ++R+ +STG++ G+ ++ A + + A E L E L E+ L+A +E LEKERDFYF KL VE MLQ AA++N E++ L + IFKVLYATE Sbjct: 5 SMSLMDGTYFVGRKEILDWINSLCAINLSKVEQTCTGAVACQILDAMYPGKVQMSKVDWAANKDYEYIQNYKVLQKAFMQLKIDKHVEVDRLVRGKYQDNLEFMQWFKAFYERNASGQPYDPIAQREKGKGGAQYTQKFGGGASSSTP-AAPLRRKVGATATSRVGRTPPGAPTSAGAARTARTSTGATRRPVGSAASASAAAAAPSEADTEAAVAAATAPLEKELEELTANNEALTNESGELRAMVESLEKERDFYFNKLREVEIMLQ----AAEDN---ESNPLAQAIFKVLYATE 294 The following BLAST results are available for this feature:
BLAST of EWM27192.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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