EWM27158.1, cds3502 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|553196702|ref|XP_005856404.1| (hypothetical protein NGA_2096500 [Nannochloropsis gaditana CCMP526] >gi|422292659|gb|EKU19961.1| hypothetical protein NGA_2096500 [Nannochloropsis gaditana CCMP526] >gi|585109338|gb|EWM27158.1| hypothetical protein Naga_100010g69 [Nannochloropsis gaditana]) HSP 1 Score: 348.206 bits (892), Expect = 2.813e-121 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query: 1 MHRMSSTSARAHSSTFSAGSFFGQGRDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYELGR 173
MHRMSSTSARAHSSTFSAGSFFGQGRDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYELGR
Sbjct: 1 MHRMSSTSARAHSSTFSAGSFFGQGRDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYELGR 173
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|929762801|ref|XP_014156381.1| (hypothetical protein SARC_05231 [Sphaeroforma arctica JP610] >gi|906953135|gb|KNC82479.1| hypothetical protein SARC_05231 [Sphaeroforma arctica JP610]) HSP 1 Score: 86.6557 bits (213), Expect = 1.746e-18 Identity = 47/147 (31.97%), Postives = 80/147 (54.42%), Query Frame = 0
Query: 28 AKKRVNKLFAIHAGIMFTLGLLSALFPE-VLVYLLHHSSD---GFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYE 170
AK+ ++ LF +HA I +G +FP ++L+H ++ G G ++ + +R++G +L Q +L+ + R D MR+ V+ Y + FGLT +AL RAQ TE + NW+ I+ F L+ YAWF + I+++E
Sbjct: 6 AKRTLDNLFLLHASISCIIGATLFIFPHFAELFLIHQDNETVIGLTDHTAGDAQKITHLVLRLYGALVLGQGHLVLMARDVADAPMRKVIVRVYAITFGLTAVALLRAQTTEGGSLNGYNWINIVVFAWLSAFYAWFVLVQPIAIFE 152
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|1129190351|gb|OLP95593.1| (Protein MEI2-like 4 [Symbiodinium microadriaticum]) HSP 1 Score: 90.5077 bits (223), Expect = 5.484e-18 Identity = 51/143 (35.66%), Postives = 77/143 (53.85%), Query Frame = 0
Query: 32 VNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDG-FHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYELGR 173
+N L +H + G + + P + + L G F + G ++ V +R++G +L Q++L + + DG +R AAV++Y V FGLTTLAL RAQLT D + NWL +L F L Y WFS + +V+E GR
Sbjct: 9 LNLLLTVHCAVAVGFGGSAFMLPHLFGFFLGEEWHGTFRWNPDDGQVKITHVVIRLYGALILGQSFLTWAAKQTDDGRVRLAAVRAYAVVFGLTTLALLRAQLT-DSTWHVLNWLNLLLFACLAAFYGWFSLVQPPAVFE-GR 149
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|673051115|ref|XP_008879518.1| (hypothetical protein H310_13686 [Aphanomyces invadans] >gi|574464837|gb|ETV91881.1| hypothetical protein H310_13686 [Aphanomyces invadans]) HSP 1 Score: 72.7886 bits (177), Expect = 4.219e-13 Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = 0
Query: 20 SFFGQGRDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
S G + ++R++ LF +HAGI +G + P L +S+ H HE +R++G LAQ +L++ R D +R+ Q+Y + F L AL RAQ++ + NW+ I+ AL AY +F F+ I V+EL
Sbjct: 15 SHTGSTTEVRRRLDTLFIVHAGIAIVIGGSCLVLPHSLAMSALGASEYGHLVHE---------VVRLYGALTLAQGWLVWKTRLVGDALIRKTFCQAYCLCFLLQAAALVRAQVSSPESHSVLNWVNIIVLAALGAAYGYFVVFKTIKVFEL 157
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|953502756|emb|CEG50471.1| (hypothetical protein PHALS_00615 [Plasmopara halstedii]) HSP 1 Score: 68.1662 bits (165), Expect = 1.944e-11 Identity = 46/146 (31.51%), Postives = 70/146 (47.95%), Query Frame = 0
Query: 26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
+ ++ ++ LFA+H I G L P L+ L + H HE FV R++G LAQ ++++ R +D +RR Q+Y + F L L L RAQ+ L NW+ I AL +AY +F F+ I +EL
Sbjct: 3 QTVRRELDNLFAVHMAIAVITGTFCFLTPHSLMSPLLGDINNSHIAHE-------FV--RLYGALTLAQGWMVWRTRLVSDAIIRRTFCQAYCICFLLQALVLLRAQIASPENHSLLNWVNIFLLVALGLAYGYFLVFKTIKAFEL 139
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|695380349|ref|XP_009516784.1| (hypothetical protein PHYSODRAFT_323028 [Phytophthora sojae] >gi|348689695|gb|EGZ29509.1| hypothetical protein PHYSODRAFT_323028 [Phytophthora sojae]) HSP 1 Score: 67.0106 bits (162), Expect = 5.824e-11 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 0
Query: 26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVY-LLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
+ ++++++LFA+H I G L L P L+ +L +S+ H HE FV R++G LAQ ++++ R +D +RR Q+Y + F L +AL RAQL + +W+ IL L AY +F F+ I +EL
Sbjct: 2 QSVRRQLDRLFAVHMVIAVVTGALCFLTPHSLMTPMLGDASNDTHLAHE-------FV--RLYGALTLAQGWMVWRTRLVSDALIRRTFCQAYCICFLLQAVALLRAQLASPESHSMLHWVNILLLGGLGCAYGYFLVFKTIKAFEL 139
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|813109674|ref|XP_012194648.1| (hypothetical protein SPRG_01058 [Saprolegnia parasitica CBS 223.65] >gi|641541232|gb|KDO34995.1| hypothetical protein SPRG_01058 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 66.2402 bits (160), Expect = 8.417e-11 Identity = 43/146 (29.45%), Postives = 70/146 (47.95%), Query Frame = 0
Query: 26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
++A+++++ LF +HA I +G L P L + H HE +R++G LAQ +L++ R D +R+ Q+Y + F L +LA+ RAQ+ L NW+ IL L AY +F F+ +EL
Sbjct: 2 QEARRQLDLLFVVHASISIVIGSACLLLPHSLAMAALQTPQYGHLVHE---------MVRLYGALTLAQGWLVWKTRLVGDALIRKTFCQAYCLCFSLQSLAMFRAQVASPESHSLLNWINILVLAGLGAAYGYFLAFKTAKAFEL 138
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|675204053|ref|XP_008910911.1| (hypothetical protein PPTG_15904 [Phytophthora parasitica INRA-310] >gi|566016319|gb|ETI39230.1| hypothetical protein F443_15178 [Phytophthora parasitica P1569] >gi|567953791|gb|ETK79437.1| hypothetical protein L915_14719 [Phytophthora parasitica] >gi|567982429|gb|ETL32849.1| hypothetical protein L916_14633 [Phytophthora parasitica] >gi|568011931|gb|ETL86109.1| hypothetical protein L917_14436 [Phytophthora parasitica] >gi|568041890|gb|ETM39258.1| hypothetical protein L914_14577 [Phytophthora parasitica] >gi|568088830|gb|ETN03684.1| hypothetical protein PPTG_15904 [Phytophthora parasitica INRA-310] >gi|570320023|gb|ETO67971.1| hypothetical protein F444_15156 [Phytophthora parasitica P1976] >gi|570943885|gb|ETP09142.1| hypothetical protein F441_14987 [Phytophthora parasitica CJ01A1] >gi|570974935|gb|ETP37174.1| hypothetical protein F442_15011 [Phytophthora parasitica P10297] >gi|970630379|gb|KUF77343.1| hypothetical protein AM587_10010166 [Phytophthora nicotianae]) HSP 1 Score: 66.2402 bits (160), Expect = 1.018e-10 Identity = 44/146 (30.14%), Postives = 73/146 (50.00%), Query Frame = 0
Query: 26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
+ ++++++LFA+H I G L L P L+ + + H HE FV R++G LAQ ++++ R +D +RR Q+Y + F L +AL RAQ+ + +W+ IL L AY +F F+ I +EL
Sbjct: 2 QTVRRQLDRLFAVHMVIAVVTGALCFLTPHSLMAPMLGDGNNTHMAHE-------FV--RLYGALTLAQGWMVWRTRLVSDALIRRTFCQAYCICFLLQAVALLRAQIASPESHSMLHWINILLLGGLGCAYGYFLVFKTIKAFEL 138
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|1214694331|gb|OWZ08411.1| (hypothetical protein PHMEG_00019055 [Phytophthora megakarya]) HSP 1 Score: 65.0846 bits (157), Expect = 2.681e-10 Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 0
Query: 26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
+ ++++++LFA+H I G L L P L+ + + H HE FV R++G LAQ ++++ R +D +RR Q+Y + F L +AL RAQL +W+ IL L AY +F F+ I +EL
Sbjct: 2 QTVRRQLDRLFAVHMVIAVVTGALCFLTPHSLMSPMLGDASNTHLAHE-------FV--RLYGALTLAQGWMVWRTRHVSDALVRRTFCQAYCICFLLQAVALLRAQLASPESHSTLHWVNILLLGGLGCAYGYFLVFKTIKAFEL 138
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|669138814|ref|XP_008604975.1| (hypothetical protein SDRG_01236 [Saprolegnia diclina VS20] >gi|530743019|gb|EQC41261.1| hypothetical protein SDRG_01236 [Saprolegnia diclina VS20]) HSP 1 Score: 64.6994 bits (156), Expect = 3.637e-10 Identity = 42/146 (28.77%), Postives = 69/146 (47.26%), Query Frame = 0
Query: 26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
++A+++++ LF +HA I +G L P L + H HE +R++G LAQ +L++ R D +R+ Q+Y + F L +LA+ RAQ+ L NW+ I L AY +F F+ +EL
Sbjct: 2 QEARRQLDLLFVVHASISIVIGSACLLLPHSLAMAALQTPQYGHLVHE---------MVRLYGALTLAQGWLVWKTRLVGDALIRKTFCQAYCMCFSLQSLAMFRAQVASPESHSLLNWINIFVLAGLGAAYGYFLAFKTAKAFEL 138 The following BLAST results are available for this feature:
BLAST of EWM27158.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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