EWM27158.1, cds3502 (CDS) Nannochloropsis gaditana

Overview
NameEWM27158.1
Unique Namecds3502
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:581853..582374 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27158.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100010g69.6128.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:581853..582374 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|553196702|ref|XP_005856404.1| (hypothetical protein NGA_2096500 [Nannochloropsis gaditana CCMP526] >gi|422292659|gb|EKU19961.1| hypothetical protein NGA_2096500 [Nannochloropsis gaditana CCMP526] >gi|585109338|gb|EWM27158.1| hypothetical protein Naga_100010g69 [Nannochloropsis gaditana])

HSP 1 Score: 348.206 bits (892), Expect = 2.813e-121
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query:    1 MHRMSSTSARAHSSTFSAGSFFGQGRDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYELGR 173
            MHRMSSTSARAHSSTFSAGSFFGQGRDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYELGR
Sbjct:    1 MHRMSSTSARAHSSTFSAGSFFGQGRDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYELGR 173          
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|929762801|ref|XP_014156381.1| (hypothetical protein SARC_05231 [Sphaeroforma arctica JP610] >gi|906953135|gb|KNC82479.1| hypothetical protein SARC_05231 [Sphaeroforma arctica JP610])

HSP 1 Score: 86.6557 bits (213), Expect = 1.746e-18
Identity = 47/147 (31.97%), Postives = 80/147 (54.42%), Query Frame = 0
Query:   28 AKKRVNKLFAIHAGIMFTLGLLSALFPE-VLVYLLHHSSD---GFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYE 170
            AK+ ++ LF +HA I   +G    +FP    ++L+H  ++   G      G   ++  + +R++G  +L Q +L+ + R   D  MR+  V+ Y + FGLT +AL RAQ TE   +   NW+ I+ F  L+  YAWF   + I+++E
Sbjct:    6 AKRTLDNLFLLHASISCIIGATLFIFPHFAELFLIHQDNETVIGLTDHTAGDAQKITHLVLRLYGALVLGQGHLVLMARDVADAPMRKVIVRVYAITFGLTAVALLRAQTTEGGSLNGYNWINIVVFAWLSAFYAWFVLVQPIAIFE 152          
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|1129190351|gb|OLP95593.1| (Protein MEI2-like 4 [Symbiodinium microadriaticum])

HSP 1 Score: 90.5077 bits (223), Expect = 5.484e-18
Identity = 51/143 (35.66%), Postives = 77/143 (53.85%), Query Frame = 0
Query:   32 VNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDG-FHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYELGR 173
            +N L  +H  +    G  + + P +  + L     G F    + G  ++  V +R++G  +L Q++L +  +   DG +R AAV++Y V FGLTTLAL RAQLT D    + NWL +L F  L   Y WFS  +  +V+E GR
Sbjct:    9 LNLLLTVHCAVAVGFGGSAFMLPHLFGFFLGEEWHGTFRWNPDDGQVKITHVVIRLYGALILGQSFLTWAAKQTDDGRVRLAAVRAYAVVFGLTTLALLRAQLT-DSTWHVLNWLNLLLFACLAAFYGWFSLVQPPAVFE-GR 149          
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|673051115|ref|XP_008879518.1| (hypothetical protein H310_13686 [Aphanomyces invadans] >gi|574464837|gb|ETV91881.1| hypothetical protein H310_13686 [Aphanomyces invadans])

HSP 1 Score: 72.7886 bits (177), Expect = 4.219e-13
Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = 0
Query:   20 SFFGQGRDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
            S  G   + ++R++ LF +HAGI   +G    + P  L      +S+  H  HE          +R++G   LAQ +L++  R   D  +R+   Q+Y + F L   AL RAQ++      + NW+ I+   AL  AY +F  F+ I V+EL
Sbjct:   15 SHTGSTTEVRRRLDTLFIVHAGIAIVIGGSCLVLPHSLAMSALGASEYGHLVHE---------VVRLYGALTLAQGWLVWKTRLVGDALIRKTFCQAYCLCFLLQAAALVRAQVSSPESHSVLNWVNIIVLAALGAAYGYFVVFKTIKVFEL 157          
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|953502756|emb|CEG50471.1| (hypothetical protein PHALS_00615 [Plasmopara halstedii])

HSP 1 Score: 68.1662 bits (165), Expect = 1.944e-11
Identity = 46/146 (31.51%), Postives = 70/146 (47.95%), Query Frame = 0
Query:   26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
            +  ++ ++ LFA+H  I    G    L P  L+  L    +  H  HE       FV  R++G   LAQ ++++  R  +D  +RR   Q+Y + F L  L L RAQ+       L NW+ I    AL +AY +F  F+ I  +EL
Sbjct:    3 QTVRRELDNLFAVHMAIAVITGTFCFLTPHSLMSPLLGDINNSHIAHE-------FV--RLYGALTLAQGWMVWRTRLVSDAIIRRTFCQAYCICFLLQALVLLRAQIASPENHSLLNWVNIFLLVALGLAYGYFLVFKTIKAFEL 139          
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|695380349|ref|XP_009516784.1| (hypothetical protein PHYSODRAFT_323028 [Phytophthora sojae] >gi|348689695|gb|EGZ29509.1| hypothetical protein PHYSODRAFT_323028 [Phytophthora sojae])

HSP 1 Score: 67.0106 bits (162), Expect = 5.824e-11
Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 0
Query:   26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVY-LLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
            +  ++++++LFA+H  I    G L  L P  L+  +L  +S+  H  HE       FV  R++G   LAQ ++++  R  +D  +RR   Q+Y + F L  +AL RAQL       + +W+ IL    L  AY +F  F+ I  +EL
Sbjct:    2 QSVRRQLDRLFAVHMVIAVVTGALCFLTPHSLMTPMLGDASNDTHLAHE-------FV--RLYGALTLAQGWMVWRTRLVSDALIRRTFCQAYCICFLLQAVALLRAQLASPESHSMLHWVNILLLGGLGCAYGYFLVFKTIKAFEL 139          
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|813109674|ref|XP_012194648.1| (hypothetical protein SPRG_01058 [Saprolegnia parasitica CBS 223.65] >gi|641541232|gb|KDO34995.1| hypothetical protein SPRG_01058 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 66.2402 bits (160), Expect = 8.417e-11
Identity = 43/146 (29.45%), Postives = 70/146 (47.95%), Query Frame = 0
Query:   26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
            ++A+++++ LF +HA I   +G    L P  L      +    H  HE          +R++G   LAQ +L++  R   D  +R+   Q+Y + F L +LA+ RAQ+       L NW+ IL    L  AY +F  F+    +EL
Sbjct:    2 QEARRQLDLLFVVHASISIVIGSACLLLPHSLAMAALQTPQYGHLVHE---------MVRLYGALTLAQGWLVWKTRLVGDALIRKTFCQAYCLCFSLQSLAMFRAQVASPESHSLLNWINILVLAGLGAAYGYFLAFKTAKAFEL 138          
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|675204053|ref|XP_008910911.1| (hypothetical protein PPTG_15904 [Phytophthora parasitica INRA-310] >gi|566016319|gb|ETI39230.1| hypothetical protein F443_15178 [Phytophthora parasitica P1569] >gi|567953791|gb|ETK79437.1| hypothetical protein L915_14719 [Phytophthora parasitica] >gi|567982429|gb|ETL32849.1| hypothetical protein L916_14633 [Phytophthora parasitica] >gi|568011931|gb|ETL86109.1| hypothetical protein L917_14436 [Phytophthora parasitica] >gi|568041890|gb|ETM39258.1| hypothetical protein L914_14577 [Phytophthora parasitica] >gi|568088830|gb|ETN03684.1| hypothetical protein PPTG_15904 [Phytophthora parasitica INRA-310] >gi|570320023|gb|ETO67971.1| hypothetical protein F444_15156 [Phytophthora parasitica P1976] >gi|570943885|gb|ETP09142.1| hypothetical protein F441_14987 [Phytophthora parasitica CJ01A1] >gi|570974935|gb|ETP37174.1| hypothetical protein F442_15011 [Phytophthora parasitica P10297] >gi|970630379|gb|KUF77343.1| hypothetical protein AM587_10010166 [Phytophthora nicotianae])

HSP 1 Score: 66.2402 bits (160), Expect = 1.018e-10
Identity = 44/146 (30.14%), Postives = 73/146 (50.00%), Query Frame = 0
Query:   26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
            +  ++++++LFA+H  I    G L  L P  L+  +    +  H  HE       FV  R++G   LAQ ++++  R  +D  +RR   Q+Y + F L  +AL RAQ+       + +W+ IL    L  AY +F  F+ I  +EL
Sbjct:    2 QTVRRQLDRLFAVHMVIAVVTGALCFLTPHSLMAPMLGDGNNTHMAHE-------FV--RLYGALTLAQGWMVWRTRLVSDALIRRTFCQAYCICFLLQAVALLRAQIASPESHSMLHWINILLLGGLGCAYGYFLVFKTIKAFEL 138          
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|1214694331|gb|OWZ08411.1| (hypothetical protein PHMEG_00019055 [Phytophthora megakarya])

HSP 1 Score: 65.0846 bits (157), Expect = 2.681e-10
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 0
Query:   26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
            +  ++++++LFA+H  I    G L  L P  L+  +   +   H  HE       FV  R++G   LAQ ++++  R  +D  +RR   Q+Y + F L  +AL RAQL         +W+ IL    L  AY +F  F+ I  +EL
Sbjct:    2 QTVRRQLDRLFAVHMVIAVVTGALCFLTPHSLMSPMLGDASNTHLAHE-------FV--RLYGALTLAQGWMVWRTRHVSDALVRRTFCQAYCICFLLQAVALLRAQLASPESHSTLHWVNILLLGGLGCAYGYFLVFKTIKAFEL 138          
BLAST of EWM27158.1 vs. NCBI_GenBank
Match: gi|669138814|ref|XP_008604975.1| (hypothetical protein SDRG_01236 [Saprolegnia diclina VS20] >gi|530743019|gb|EQC41261.1| hypothetical protein SDRG_01236 [Saprolegnia diclina VS20])

HSP 1 Score: 64.6994 bits (156), Expect = 3.637e-10
Identity = 42/146 (28.77%), Postives = 69/146 (47.26%), Query Frame = 0
Query:   26 RDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYEL 171
            ++A+++++ LF +HA I   +G    L P  L      +    H  HE          +R++G   LAQ +L++  R   D  +R+   Q+Y + F L +LA+ RAQ+       L NW+ I     L  AY +F  F+    +EL
Sbjct:    2 QEARRQLDLLFVVHASISIVIGSACLLLPHSLAMAALQTPQYGHLVHE---------MVRLYGALTLAQGWLVWKTRLVGDALIRKTFCQAYCMCFSLQSLAMFRAQVASPESHSLLNWINIFVLAGLGAAYGYFLAFKTAKAFEL 138          
The following BLAST results are available for this feature:
BLAST of EWM27158.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553196702|ref|XP_005856404.1|2.813e-121100.00hypothetical protein NGA_2096500 [Nannochloropsis ... [more]
gi|929762801|ref|XP_014156381.1|1.746e-1831.97hypothetical protein SARC_05231 [Sphaeroforma arct... [more]
gi|1129190351|gb|OLP95593.1|5.484e-1835.66Protein MEI2-like 4 [Symbiodinium microadriaticum][more]
gi|673051115|ref|XP_008879518.1|4.219e-1330.92hypothetical protein H310_13686 [Aphanomyces invad... [more]
gi|953502756|emb|CEG50471.1|1.944e-1131.51hypothetical protein PHALS_00615 [Plasmopara halst... [more]
gi|695380349|ref|XP_009516784.1|5.824e-1131.97hypothetical protein PHYSODRAFT_323028 [Phytophtho... [more]
gi|813109674|ref|XP_012194648.1|8.417e-1129.45hypothetical protein SPRG_01058 [Saprolegnia paras... [more]
gi|675204053|ref|XP_008910911.1|1.018e-1030.14hypothetical protein PPTG_15904 [Phytophthora para... [more]
gi|1214694331|gb|OWZ08411.1|2.681e-1030.82hypothetical protein PHMEG_00019055 [Phytophthora ... [more]
gi|669138814|ref|XP_008604975.1|3.637e-1028.77hypothetical protein SDRG_01236 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3511rna3511Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications