EWM27334.1, cds3338 (CDS) Nannochloropsis gaditana

Overview
NameEWM27334.1
Unique Namecds3338
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:177112..177276 -
Alignment locationCM002461.1:176674..176864 -
Alignment locationCM002461.1:176359..176536 -
Alignment locationCM002461.1:176092..176196 -
Alignment locationCM002461.1:175806..175846 -
Alignment locationCM002461.1:175672..175747 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27334.1
Productserine threonine protein
Orig transcript idgnl|cribi|Naga_101019g1.8721.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:177112..177276 -
CM002461.1supercontigCM002461.1:176674..176864 -
CM002461.1supercontigCM002461.1:176359..176536 -
CM002461.1supercontigCM002461.1:176092..176196 -
CM002461.1supercontigCM002461.1:175806..175846 -
CM002461.1supercontigCM002461.1:175672..175747 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR004843Calcineurin-like_PHP_apaH
IPR029052Metallo-depent_PP-like
IPR006186Ser/Thr-sp_prot-phosphatase
Homology
BLAST of EWM27334.1 vs. NCBI_GenBank
Match: gi|585109538|gb|EWM27334.1| (serine threonine protein [Nannochloropsis gaditana])

HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
Query:    1 MEVVSAAISASSAAPSTTGGGGNTAAPSDAVLSEVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTGTRGASPSLLEKTLSGLFSSDTTST 251
            MEVVSAAISASSAAPSTTGGGGNTAAPSDAVLSEVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTGTRGASPSLLEKTLSGLFSSDTTST
Sbjct:    1 MEVVSAAISASSAAPSTTGGGGNTAAPSDAVLSEVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTGTRGASPSLLEKTLSGLFSSDTTST 251          
BLAST of EWM27334.1 vs. NCBI_GenBank
Match: gi|671690046|emb|CDS04786.1| (Putative Serine/threonine-protein phosphatase [Lichtheimia ramosa])

HSP 1 Score: 350.517 bits (898), Expect = 1.650e-118
Identity = 158/200 (79.00%), Postives = 180/200 (90.00%), Query Frame = 0
Query:   28 SDAVLSEVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTG 227
            +D    +V  IIE+LL VRG+R     QV L+EDE+K LC R+REIF++QPIL+++EAP+KICGD+HGQYYDLLRLFEYGG+PPE+NYLFLGDYVDRGKQSLETICLLLAYKI YPENFFILRGNHECAS+NRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AAI+D KIFCMHGGLSP+L  M+QIRR+ RPTDVPDTG
Sbjct:    2 ADTADFDVNSIIERLLEVRGSRPGK--QVQLSEDEIKFLCSRAREIFMSQPILLDLEAPIKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCMHGGLSPDLQSMEQIRRVMRPTDVPDTG 199          
BLAST of EWM27334.1 vs. NCBI_GenBank
Match: gi|661187859|emb|CDH50078.1| (serine threonine-protein phosphatase pp1 [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 350.132 bits (897), Expect = 2.169e-118
Identity = 158/200 (79.00%), Postives = 180/200 (90.00%), Query Frame = 0
Query:   28 SDAVLSEVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTG 227
            +D    +V  IIE+LL VRG+R     QV L+EDE+K LC R+REIF++QPIL+++EAP+KICGD+HGQYYDLLRLFEYGG+PPE+NYLFLGDYVDRGKQSLETICLLLAYKI YPENFFILRGNHECAS+NRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AAI+D KIFCMHGGLSP+L  M+QIRR+ RPTDVPDTG
Sbjct:    2 ADTADFDVNSIIERLLEVRGSRPGK--QVQLSEDEIKFLCSRAREIFMSQPILLDLEAPIKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCMHGGLSPDLQSMEQIRRVMRPTDVPDTG 199          
BLAST of EWM27334.1 vs. NCBI_GenBank
Match: gi|749160825|ref|XP_011132041.1| (serine/threonine-protein phosphatase [Gregarina niphandrodes] >gi|608654429|gb|EZG49482.1| serine/threonine-protein phosphatase [Gregarina niphandrodes])

HSP 1 Score: 347.821 bits (891), Expect = 1.080e-117
Identity = 157/204 (76.96%), Postives = 183/204 (89.71%), Query Frame = 0
Query:   24 TAAPSDAVLSEVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTG 227
            +AA S AV  +V  II KLL VRG+R   ++Q  LTE EV+ LCQ+SREIF+ QPIL+E+EAP+KICGD+HGQYYDLLRLFEYGG+PP++NYLFLGDYVDRGKQSLETICLLLAYKI YPENFF+LRGNHECAS+NRIYGFYDECK+RYN+K+W+TFTDCFNCLPVAAI+D KIFCMHGGLSPEL  MDQ+R++ RPTDVPD+G
Sbjct:    2 SAAASGAVEVDVDAIISKLLEVRGSRPGKSVQ--LTEAEVRGLCQKSREIFIAQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKKRYNVKVWRTFTDCFNCLPVAAIIDEKIFCMHGGLSPELQSMDQVRKIVRPTDVPDSG 203          
BLAST of EWM27334.1 vs. NCBI_GenBank
Match: gi|635371888|emb|CCI39850.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 345.895 bits (886), Expect = 7.911e-117
Identity = 162/200 (81.00%), Postives = 180/200 (90.00%), Query Frame = 0
Query:   28 SDAVLSEVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTG 227
            SDA +   GVI EKLL+VRG R     QV L+ DE++ LC +SR++FL+QPIL+E+EAPVKICGD+HGQYYDLLRLFEYGG+PPE+NYLFLGDYVDRGKQSLETICLLLAYKI YPENFFILRGNHECAS+NRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAI+D KIFCMHGGLSPEL HM+QI+R  RPTDVPDTG
Sbjct:    2 SDAHVDVDGVI-EKLLSVRGARPGK--QVNLSIDEIRGLCVQSRDVFLSQPILLELEAPVKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPELSHMEQIKRFARPTDVPDTG 198          
BLAST of EWM27334.1 vs. NCBI_GenBank
Match: gi|325184710|emb|CCA19201.1| (serine/threonineprotein phosphatase PP1gamma catalytic subunit putative [Albugo laibachii Nc14])

HSP 1 Score: 345.895 bits (886), Expect = 8.086e-117
Identity = 160/200 (80.00%), Postives = 181/200 (90.50%), Query Frame = 0
Query:   28 SDAVLSEVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTG 227
            SDA + +V  +IEKLL+VRG R     QV L+ +E++ LC +SR++FL+QPIL+E+EAPVKICGD+HGQYYDLLRLFEYGG+PPE+NYLFLGDYVDRGKQSLETICLLLAYKI YPENFFILRGNHECAS+NRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAI+D KIFCMHGGLSPEL HM+QI+R  RPTDVPDTG
Sbjct:    2 SDAHV-DVDAVIEKLLSVRGARPGK--QVNLSIEEIRGLCVQSRDVFLSQPILLELEAPVKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPELSHMEQIKRFARPTDVPDTG 198          
BLAST of EWM27334.1 vs. NCBI_GenBank
Match: gi|696993678|ref|XP_009563820.1| (PREDICTED: serine/threonine-protein phosphatase PP1-alpha catalytic subunit [Cuculus canorus])

HSP 1 Score: 347.051 bits (889), Expect = 9.292e-117
Identity = 163/224 (72.77%), Postives = 185/224 (82.59%), Query Frame = 0
Query:    4 VSAAISASSAAPSTTGGGGNTAAPSDAVLSEVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTG 227
            +SAA    S  PS TG G       D V      ++  LL V+G+R   N+Q  LTE+E++ LC +SREIFL+QPIL+E+EAP+KICGD+HGQYYDLLRLFEYGG+PPESNYLFLGDYVDRGKQSLETICLLLAYKI YPENFF+LRGNHECAS+NRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AAIVD KIFC HGGLSP+L  M+QIRR+ RPTDVPD G
Sbjct:    3 LSAAALPRSWCPSVTGFGDAVTVFGDTVTGFGDTLLSPLLTVQGSRPGKNVQ--LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG 224          
BLAST of EWM27334.1 vs. NCBI_GenBank
Match: gi|237830037|ref|XP_002364316.1| (serine/threonine phosophatase PP1 [Toxoplasma gondii ME49] >gi|675129422|ref|XP_008886598.1| serine/threonine phosophatase PP1 [Hammondia hammondi] >gi|90654517|gb|ABD96038.1| protein phosphatase type 1 [Toxoplasma gondii] >gi|523574141|gb|EPR60897.1| serine/threonine phosophatase PP1 [Toxoplasma gondii GT1] >gi|527309524|gb|EPT26160.1| serine/threonine phosophatase PP1 [Toxoplasma gondii ME49] >gi|557739052|gb|ESS34956.1| serine/threonine phosophatase PP1 [Toxoplasma gondii VEG] >gi|661334783|gb|KEP62926.1| serine/threonine phosophatase PP1 [Hammondia hammondi] >gi|672267802|gb|KFG40966.1| serine/threonine phosophatase PP1 [Toxoplasma gondii p89] >gi|672272182|gb|KFG44459.1| serine/threonine phosophatase PP1 [Toxoplasma gondii GAB2-2007-GAL-DOM2] >gi|672288171|gb|KFG55843.1| serine/threonine phosophatase PP1 [Toxoplasma gondii FOU] >gi|672302929|gb|KFG65830.1| serine/threonine phosophatase PP1 [Toxoplasma gondii RUB] >gi|672561115|gb|KFH02305.1| serine/threonine phosophatase PP1 [Toxoplasma gondii VAND] >gi|672581011|gb|KFH18078.1| serine/threonine phosophatase PP1 [Toxoplasma gondii MAS] >gi|820701633|tpe|CEL77367.1| TPA: serine/threonine protein phosphatase, putative [Toxoplasma gondii VEG] >gi|1005160667|gb|KYF47717.1| serine/threonine phosophatase PP1 [Toxoplasma gondii ARI] >gi|1008953264|gb|KYK69998.1| serine/threonine phosophatase PP1 [Toxoplasma gondii TgCatPRC2])

HSP 1 Score: 345.125 bits (884), Expect = 1.167e-116
Identity = 157/194 (80.93%), Postives = 177/194 (91.24%), Query Frame = 0
Query:   34 EVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTG 227
            +V  +I KLL VRG+R    +Q  LTE E++ LC +SREIF++QPIL+E+EAP+KICGD+HGQYYDLLRLFEYGG+PPE+NYLFLGDYVDRGKQSLETICLLLAYKI YPENFF+LRGNHECAS+NRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAI+D KIFCMHGGLSPEL+ MDQIRR+ RPTDVPDTG
Sbjct:    7 DVDAVISKLLEVRGSRPGKPVQ--LTEAEIRGLCHKSREIFISQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPELNSMDQIRRIVRPTDVPDTG 198          
BLAST of EWM27334.1 vs. NCBI_GenBank
Match: gi|915147507|ref|XP_013338603.1| (serine/threonine protein phosphatase, putative [Eimeria maxima] >gi|557243655|emb|CDJ61953.1| serine/threonine protein phosphatase, putative [Eimeria maxima])

HSP 1 Score: 341.658 bits (875), Expect = 1.197e-116
Identity = 154/194 (79.38%), Postives = 176/194 (90.72%), Query Frame = 0
Query:   34 EVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTG 227
            +V  +I KLL VRG+R    +Q  LTE E++ LCQ+SREIF+ QPIL+E+EAP+KICGD+HGQYYDLLRLFEYGG+PPE+NYLFLGDYVDRGKQSLETICLLLAYKI YPENFF+LRGNHECAS+NRIYGFYDECKRRYN+KLWKTFTDCFNCLPVAAI+D KI CMHGGLSPEL+ MDQ+R++ RPTDVPDTG
Sbjct:    8 DVDAVISKLLEVRGSRPGKPVQ--LTEAEIRGLCQKSREIFIAQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNVKLWKTFTDCFNCLPVAAIIDEKILCMHGGLSPELNSMDQVRKILRPTDVPDTG 199          
BLAST of EWM27334.1 vs. NCBI_GenBank
Match: gi|401411261|ref|XP_003885078.1| (hypothetical protein NCLIV_054750 [Neospora caninum Liverpool] >gi|325119497|emb|CBZ55050.1| hypothetical protein NCLIV_054750 [Neospora caninum Liverpool] >gi|820694034|tpe|CEL69774.1| TPA: Serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Neospora caninum Liverpool])

HSP 1 Score: 344.739 bits (883), Expect = 1.360e-116
Identity = 157/194 (80.93%), Postives = 177/194 (91.24%), Query Frame = 0
Query:   34 EVGVIIEKLLAVRGTRQSSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCMHGGLSPELHHMDQIRRLPRPTDVPDTG 227
            +V  +I KLL VRG+R    +Q  LTE E++ LC +SREIF++QPIL+E+EAP+KICGD+HGQYYDLLRLFEYGG+PPE+NYLFLGDYVDRGKQSLETICLLLAYKI YPENFF+LRGNHECAS+NRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAI+D KIFCMHGGLSPEL+ MDQIRR+ RPTDVPDTG
Sbjct:    7 DVDAVISKLLEVRGSRPGKPVQ--LTEAEIRGLCHKSREIFISQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPELNSMDQIRRIVRPTDVPDTG 198          
The following BLAST results are available for this feature:
BLAST of EWM27334.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109538|gb|EWM27334.1|0.000e+0100.00serine threonine protein [Nannochloropsis gaditana... [more]
gi|671690046|emb|CDS04786.1|1.650e-11879.00Putative Serine/threonine-protein phosphatase [Lic... [more]
gi|661187859|emb|CDH50078.1|2.169e-11879.00serine threonine-protein phosphatase pp1 [Lichthei... [more]
gi|749160825|ref|XP_011132041.1|1.080e-11776.96serine/threonine-protein phosphatase [Gregarina ni... [more]
gi|635371888|emb|CCI39850.1|7.911e-11781.00unnamed protein product [Albugo candida][more]
gi|325184710|emb|CCA19201.1|8.086e-11780.00serine/threonineprotein phosphatase PP1gamma catal... [more]
gi|696993678|ref|XP_009563820.1|9.292e-11772.77PREDICTED: serine/threonine-protein phosphatase PP... [more]
gi|237830037|ref|XP_002364316.1|1.167e-11680.93serine/threonine phosophatase PP1 [Toxoplasma gond... [more]
gi|915147507|ref|XP_013338603.1|1.197e-11679.38serine/threonine protein phosphatase, putative [Ei... [more]
gi|401411261|ref|XP_003885078.1|1.360e-11680.93hypothetical protein NCLIV_054750 [Neospora caninu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3347rna3347Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications