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Properties
| Property Name | Value |
|---|
| Product | serine threonine protein |
| Orig transcript id | gnl|cribi|Naga_101019g1.8721.mrna |
| Orig protein id | gnl|cribi|Naga_101019g1.8721 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:175672..177276 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3347 ID=rna3347|Name=rna3347|organism=Nannochloropsis gaditana|type=mRNA|length=2930bp
ATACAAATCAATGATAATTACATGATATCATATCGGGAAGGATAGTTGTT
AACCTGCCTTTTTGAAGCCCGAAAACGGGAATCTCTTGAAGGAATGCCCG
CGGCGATTACTAGACTCCCATCCCTCGCGGATGTTTCGGGATACCTTTCT
GCTTTTGTTGCGCTTGACTTGAAGGTGTGCAATTTATATCTAAACTTTAT
TAGCGCGCATTTTATGTAAGTTGTTCCTGCACGCATACTGAGACACGAAA
AGCAGTCTACTGTCTTGACCTCCTGTCTCCTTGTCGGCTTCCTTTCCTAT
CCGGGGCACGCGCTCTCATACCCGCATTCATGCTCTCCCGACCAATGTCC
TACATGTAGGTCTACTCACAGCTTTAAGGCTCTGTATCAAGAATATACAT
GAGCCGTGAACCGTCCAGTGCATTGGGAACTTCGGCGGGGAGAGGTTCCC
CGTCCGCTGCCGGCATTGACGCTCAGCCTGAGTCTCCTCCAAGGACGACA
ACGAGGCTTCCGGAGTCTTTGGCACTGAAATCACTTCCCAGTCTTAGTCG
GACGCCGTCGGCATCTGGCACCCTGGAAGCCTTGGCCTTGTTGTCGTCAC
CCCGTTCCTCGCCTGGCGGCCCCCGCTCTCGCTCTCCCTTGCCTCCTCGC
CCTACGTCGTCGCCTCGTAATGCATCCGGCAGTCCCTCCCTGCCACTCCC
GACGTTCATGTCCCCGACCGCCTCGTCCACGAACCGCTCCTCTCTGACCG
GTCTGCCTGATCAGCTTGTCATTCATGGCCCCTCTTCCTTGTCTTCACCC
TCATCCCGTGTCCTGAATGCCTCCCCGATTGTGGGTGAGCTGCACAAGAT
CAAGGAAGAAGAGAACGAAGATCACAGTGAAAGCGGACGATCCCGAAACT
CGAGTGCAGCTTCAACCAGCCTAGCGAGTGGGCGTTCGCGTGATCCGAGC
ATCGTCATGGCGAGCGGGCAGGAAATCCAATCGCAAAACTCATCCCCTTC
AGTGCTTGCCGTGCCCACCTCGTCGGGATCTGCTTCCTCTACCCATCTGG
GGGCAGCCACGACCTCTCACACGTCCCCAAAAGCGAAGGCCAATGGCGAC
GTCTTTGACCGCCTCTTTGCTGGGCGTCCCTCCCGCCCTTCCACGCCAGC
GGAGAGGGAGACGTTGACCGCCGAGCACACCTTCCAACCCAATCTGGCCA
AGGTGGAAAAAGACAGGCACAAGGGAATGGAGAGGAGGGAGGACGGCCTT
GTCTTCGAACGGCTGTACAAGCAGGGCGTGGGCCAGGCAGAATGTCGTCT
GAAAGCGGCGGAAATCAAAGCTAAGCAGGAAAGTGCAAGCTGTTCTTTTG
CTCCAAGACTGGTGACCGAGGAACACAAGCGATTGCGAGGCTCGCCCTCC
CCTCCCGCCCCTGAGCATGCCGCCGACTCCCCCCCCGTGCATGAACGGCT
TTACAAGGGCCTGGAAAAGCGTTTGGACTACTTTGAAAAGGCGGAGAAAA
GGAAATCAGAGAAGGAAACTCACGGTTGCACCTTCATTCCTGCGATCTTG
AAGACCCCCGTGGCTATGAAAGCAGCGGCAGCGGGCTTGAGGGCCGAAAC
TGGAGAGGCCGGAGAGGCGAAGGAGGGAGTGGGGAGACAGGAAGAGACAG
AGGAGAAGGCTGGGGAGGGAAAGAAAGAAAGCGCTTCGAAAAAGGTCTGG
GAGCGCTTGTATCACGCGCGGGTGCCGTTGGAGGCGAAGAAAGCCCGCCA
ACGTCAGGAATACGAGGATCAAGTCTTACCATTTCGGCCTGAGCTGGTTA
CCAAGACAAACGTGAGAGAAGAGAGAAGCAGGGCCGGGGAACAAGCGGGC
AGCAAGCCTGGCTACACAGATGCCCATGGACGTCTGTACGAAGAGTCTAT
CGCTCGCAGACAGCGGGCTTTGCACCGGGAAGTCCAAATGCCTGAAGGGT
GCACTTTCCAACCCAACATACAAGTGCTCACTTTGAAAGAGCAGAGCTCA
GTATCGATGACACGGGCAGGGTCACCGAATGACGCATTACGGATGGACGC
CATGTACCGACGTGGAACGGAGAAAGGAAAGCAACAGCTCGAACATGAAA
TTGCCTCCCGCCCACCGCCGCCGAAATCGGACGAGGAGGAATGCACTTTT
TTCCCCCAAACAAATGTGAAGGCGAAGCGTGCCAGATGAGACCCAGAGGG
ATCTTGAACGGTTCAAGATATTGGGCGCGGTGTCGTGCTTGACGCCGACT
TGATTTGTTTTGATAAGAAAAAGGAAACGCTCGATTAATTATCATTGACC
GCTCGCGTCGGGAGCAGAGACGTCGATCAAACAAGTGAAAAGGACAGTGA
CATGAAAGAGTGAATGAGAAAGCCAAGTCAGGACGGAGAGACAGCAGCTT
TAAGTGGGCGGAAAGCACTTTGTCGGACTCGAGGGGGGGATGGAAGGCTC
TGAATGGGAGGAAAGGGAAGAAGATGGGGGCACAACTATCAGGATTGAGT
TGGCTTACGAGGTCACTACAAGAGAATGAACATTCCTGACAACATACGGA
AGAAGGAGAGAAAGATGAATTAAGATGTGATGTTACTGTGCAGAGAGTAA
TTTCCTCCCATCCCATCGAAGTCAAGCGTAGGATGTACCAAAATAGAGGA
AAAGGACACCGTACACACCTCCCGATATTTACACATGGCCGAGGAGGCCA
TCTATCCTGAGAGCATGATGTGGGAGTGTATATATTAAATATCTACAATG
TAATCCGGCGTCGTGGTCGACTTGAATGAATTATACGAAAGGAAGAAAAA
AAAGAGCCTTGGAAGCAGCTAGGGGAACCAGAGAAACGAACGGGCCCGTT
GAGGCGTTTCTAGCGTCCCTGCCGAGCCATCGAAAAGCCCCCTTGCAACA
CCAACACTAACAAATTGACCCCACATGTCT back to topprotein sequence of rna3347 >rna3347-protein ID=rna3347-protein|Name=rna3347|organism=Nannochloropsis gaditana|type=polypeptide|length=251bp
MEVVSAAISASSAAPSTTGGGGNTAAPSDAVLSEVGVIIEKLLAVRGTRQ
SSNMQVTLTEDEVKMLCQRSREIFLTQPILIEVEAPVKICGDLHGQYYDL
LRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMYPENFFILR
GNHECASVNRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDGKIFCM
HGGLSPELHHMDQIRRLPRPTDVPDTGTRGASPSLLEKTLSGLFSSDTTS
T back to topmRNA from alignment at CM002461.1:175672..177276- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3347 ID=rna3347|Name=rna3347|organism=Nannochloropsis gaditana|type=mRNA|length=1605bp|location=Sequence derived from alignment at CM002461.1:175672..177276- (Nannochloropsis gaditana)
ATGGAAGTGGTCTCCGCTGCCATTTCTGCGTCTTCTGCCGCTCCCAGCAC
GACTGGAGGAGGAGGAAACACGGCTGCACCCTCTGATGCTGTTCTTTCAG
AAGTAGGAGTCATCATTGAGAAGCTCTTGGCCGTGCGAGGGACGCGTCAG
TCGAGTAACATGCAGGTAGGGAGGGACCTGTTGAGAGAGGGAGGGCACAA
GAACTTGGGGCGCACGTGGCTCGAGAGAGGGACACGGAGGGTCTCATCCT
TCTTTCAGACGAGTTAGAGATGGACTGGAAGATCCTGGAGGACAACCAGG
GGTCATGGCAGGTCCCCAAACGGTGGAGGATTGCGACCTCTGCAGCTTCA
CGTGTCCCTTGTGTTACCCAACCTCCTCCTCTTTCCTCCTTGGCCCCTCC
CCACGCCCTTAGGTAACCCTGACCGAAGACGAGGTAAAAATGCTGTGTCA
ACGGTCGCGGGAAATCTTTCTCACTCAGCCCATCCTCATCGAAGTGGAAG
CCCCCGTCAAGATCTGCGGAGACCTCCACGGCCAGTATTACGACCTGTTA
CGCCTGTTTGAATACGGGGGCTACCCACCGGAGAGCAATTATCTTTTTCT
TGGGTGAGTCAGGAGGGAGGAATGAGAGGATGGGTGGGAAGGAGAAGGAC
TCAGGAGGCACTCTCCGACGGCTTGCTCCTGTCCATCGCGCCCTGCCGGT
TCTGATTCTCTCCCATGCCCTTTGCTTTCCATCCATGCAGCGATTACGTG
GACCGAGGCAAGCAATCGCTTGAGACGATCTGCCTCCTCCTCGCGTACAA
GATCATGTACCCCGAGAATTTCTTCATCCTCCGAGGGAACCATGAATGTG
CCTCCGTGAACCGGATCTACGGCTTCTACGACGAATGCAAACGTCGGTAC
AACATCAAACTCTGGAAGGTACTTGCATTTTGCCTCTTTCTCGACCCTTC
GTACCTTCCTGTAAGGCTTGGTTCGAATACAAACATTCACATATGCATGC
TCCTCCTATCCCCCCTTCTCCCCCCCCCCCCCAAACCCTTCTTTCCCCTC
CTTCCTTTCCCCATCCCTCCTTCTTTTAAGACTTTCACGGATTGTTTCAA
TTGTCTCCCTGTCGCTGCCATTGTTGATGGCAAAATTTTCTGCATGCATG
GTGGCTTGAGCCCCGAACTCCATCACATGGACCAGGTAAGTCCTCCCTCC
TTTCCTCCCCCCCTCCCTCCCCTCCTCCCTCCCTCTCTCCATTTTTCGCT
CCTTTCCTCCCCCTTCCGTGCCCTGCTTGCGTTCTCTTCATGGTCAAGCG
AGCCACGGCGCGAAACGAGAAAGACAGGCCACACGCTCGCCTGAATGCTT
GGGGGCCCTCCTAGGGCAGGCACCCGGCCTTCCTTGAATGAAGACCCTCC
ATCTGTCCCCTCCTCCCTCCCTCCCCTCAGATCCGGCGCCTTCCCCGCCC
CACCGACGTGCCTGACACTGGGTTGCTCTGCGACTTGCTCTGGGCCGACC
CCGACAAGGAGATCAACGGGTGGGGGGAGAACGAGAGGGGCGTCTCCTTC
ACTTTTGGAGAAGACATTGTCAGGTCTTTTCTCAAGCGACACGACCTCGA
CCTGA back to topCoding sequence (CDS) from alignment at CM002461.1:175672..177276- >rna3347 ID=rna3347|Name=rna3347|organism=Nannochloropsis gaditana|type=CDS|length=4536bp|location=Sequence derived from alignment at CM002461.1:175672..177276- (Nannochloropsis gaditana)
AACGAGAGGGGCGTCTCCTTCACTTTTGGAGAAGACATTGTCAGGTCTTT
TCTCAAGCGACACGACCTCGACCTGAATCCGGCGCCTTCCCCGCCCCACC
GACGTGCCTGACACTGGACTTTCACGGATTGTTTCAATTGTCTCCCTGTC
GCTGCCATTGTTGATGGCAAAATTTTCTGCATGCATGGTGGCTTGAGCCC
CGAACTCCATCACATGGACCAGCGATTACGTGGACCGAGGCAAGCAATCG
CTTGAGACGATCTGCCTCCTCCTCGCGTACAAGATCATGTACCCCGAGAA
TTTCTTCATCCTCCGAGGGAACCATGAATGTGCCTCCGTGAACCGGATCT
ACGGCTTCTACGACGAATGCAAACGTCGGTACAACATCAAACTCTGGAAG
GTAACCCTGACCGAAGACGAGGTAAAAATGCTGTGTCAACGGTCGCGGGA
AATCTTTCTCACTCAGCCCATCCTCATCGAAGTGGAAGCCCCCGTCAAGA
TCTGCGGAGACCTCCACGGCCAGTATTACGACCTGTTACGCCTGTTTGAA
TACGGGGGCTACCCACCGGAGAGCAATTATCTTTTTCTTGGATGGAAGTG
GTCTCCGCTGCCATTTCTGCGTCTTCTGCCGCTCCCAGCACGACTGGAGG
AGGAGGAAACACGGCTGCACCCTCTGATGCTGTTCTTTCAGAAGTAGGAG
TCATCATTGAGAAGCTCTTGGCCGTGCGAGGGACGCGTCAGTCGAGTAAC
ATGCAGAACGAGAGGGGCGTCTCCTTCACTTTTGGAGAAGACATTGTCAG
GTCTTTTCTCAAGCGACACGACCTCGACCTGAATCCGGCGCCTTCCCCGC
CCCACCGACGTGCCTGACACTGGACTTTCACGGATTGTTTCAATTGTCTC
CCTGTCGCTGCCATTGTTGATGGCAAAATTTTCTGCATGCATGGTGGCTT
GAGCCCCGAACTCCATCACATGGACCAGCGATTACGTGGACCGAGGCAAG
CAATCGCTTGAGACGATCTGCCTCCTCCTCGCGTACAAGATCATGTACCC
CGAGAATTTCTTCATCCTCCGAGGGAACCATGAATGTGCCTCCGTGAACC
GGATCTACGGCTTCTACGACGAATGCAAACGTCGGTACAACATCAAACTC
TGGAAGGTAACCCTGACCGAAGACGAGGTAAAAATGCTGTGTCAACGGTC
GCGGGAAATCTTTCTCACTCAGCCCATCCTCATCGAAGTGGAAGCCCCCG
TCAAGATCTGCGGAGACCTCCACGGCCAGTATTACGACCTGTTACGCCTG
TTTGAATACGGGGGCTACCCACCGGAGAGCAATTATCTTTTTCTTGGATG
GAAGTGGTCTCCGCTGCCATTTCTGCGTCTTCTGCCGCTCCCAGCACGAC
TGGAGGAGGAGGAAACACGGCTGCACCCTCTGATGCTGTTCTTTCAGAAG
TAGGAGTCATCATTGAGAAGCTCTTGGCCGTGCGAGGGACGCGTCAGTCG
AGTAACATGCAGAACGAGAGGGGCGTCTCCTTCACTTTTGGAGAAGACAT
TGTCAGGTCTTTTCTCAAGCGACACGACCTCGACCTGAATCCGGCGCCTT
CCCCGCCCCACCGACGTGCCTGACACTGGACTTTCACGGATTGTTTCAAT
TGTCTCCCTGTCGCTGCCATTGTTGATGGCAAAATTTTCTGCATGCATGG
TGGCTTGAGCCCCGAACTCCATCACATGGACCAGCGATTACGTGGACCGA
GGCAAGCAATCGCTTGAGACGATCTGCCTCCTCCTCGCGTACAAGATCAT
GTACCCCGAGAATTTCTTCATCCTCCGAGGGAACCATGAATGTGCCTCCG
TGAACCGGATCTACGGCTTCTACGACGAATGCAAACGTCGGTACAACATC
AAACTCTGGAAGGTAACCCTGACCGAAGACGAGGTAAAAATGCTGTGTCA
ACGGTCGCGGGAAATCTTTCTCACTCAGCCCATCCTCATCGAAGTGGAAG
CCCCCGTCAAGATCTGCGGAGACCTCCACGGCCAGTATTACGACCTGTTA
CGCCTGTTTGAATACGGGGGCTACCCACCGGAGAGCAATTATCTTTTTCT
TGGATGGAAGTGGTCTCCGCTGCCATTTCTGCGTCTTCTGCCGCTCCCAG
CACGACTGGAGGAGGAGGAAACACGGCTGCACCCTCTGATGCTGTTCTTT
CAGAAGTAGGAGTCATCATTGAGAAGCTCTTGGCCGTGCGAGGGACGCGT
CAGTCGAGTAACATGCAGAACGAGAGGGGCGTCTCCTTCACTTTTGGAGA
AGACATTGTCAGGTCTTTTCTCAAGCGACACGACCTCGACCTGAATCCGG
CGCCTTCCCCGCCCCACCGACGTGCCTGACACTGGACTTTCACGGATTGT
TTCAATTGTCTCCCTGTCGCTGCCATTGTTGATGGCAAAATTTTCTGCAT
GCATGGTGGCTTGAGCCCCGAACTCCATCACATGGACCAGCGATTACGTG
GACCGAGGCAAGCAATCGCTTGAGACGATCTGCCTCCTCCTCGCGTACAA
GATCATGTACCCCGAGAATTTCTTCATCCTCCGAGGGAACCATGAATGTG
CCTCCGTGAACCGGATCTACGGCTTCTACGACGAATGCAAACGTCGGTAC
AACATCAAACTCTGGAAGGTAACCCTGACCGAAGACGAGGTAAAAATGCT
GTGTCAACGGTCGCGGGAAATCTTTCTCACTCAGCCCATCCTCATCGAAG
TGGAAGCCCCCGTCAAGATCTGCGGAGACCTCCACGGCCAGTATTACGAC
CTGTTACGCCTGTTTGAATACGGGGGCTACCCACCGGAGAGCAATTATCT
TTTTCTTGGATGGAAGTGGTCTCCGCTGCCATTTCTGCGTCTTCTGCCGC
TCCCAGCACGACTGGAGGAGGAGGAAACACGGCTGCACCCTCTGATGCTG
TTCTTTCAGAAGTAGGAGTCATCATTGAGAAGCTCTTGGCCGTGCGAGGG
ACGCGTCAGTCGAGTAACATGCAGAACGAGAGGGGCGTCTCCTTCACTTT
TGGAGAAGACATTGTCAGGTCTTTTCTCAAGCGACACGACCTCGACCTGA
ATCCGGCGCCTTCCCCGCCCCACCGACGTGCCTGACACTGGACTTTCACG
GATTGTTTCAATTGTCTCCCTGTCGCTGCCATTGTTGATGGCAAAATTTT
CTGCATGCATGGTGGCTTGAGCCCCGAACTCCATCACATGGACCAGCGAT
TACGTGGACCGAGGCAAGCAATCGCTTGAGACGATCTGCCTCCTCCTCGC
GTACAAGATCATGTACCCCGAGAATTTCTTCATCCTCCGAGGGAACCATG
AATGTGCCTCCGTGAACCGGATCTACGGCTTCTACGACGAATGCAAACGT
CGGTACAACATCAAACTCTGGAAGGTAACCCTGACCGAAGACGAGGTAAA
AATGCTGTGTCAACGGTCGCGGGAAATCTTTCTCACTCAGCCCATCCTCA
TCGAAGTGGAAGCCCCCGTCAAGATCTGCGGAGACCTCCACGGCCAGTAT
TACGACCTGTTACGCCTGTTTGAATACGGGGGCTACCCACCGGAGAGCAA
TTATCTTTTTCTTGGATGGAAGTGGTCTCCGCTGCCATTTCTGCGTCTTC
TGCCGCTCCCAGCACGACTGGAGGAGGAGGAAACACGGCTGCACCCTCTG
ATGCTGTTCTTTCAGAAGTAGGAGTCATCATTGAGAAGCTCTTGGCCGTG
CGAGGGACGCGTCAGTCGAGTAACATGCAGAACGAGAGGGGCGTCTCCTT
CACTTTTGGAGAAGACATTGTCAGGTCTTTTCTCAAGCGACACGACCTCG
ACCTGAATCCGGCGCCTTCCCCGCCCCACCGACGTGCCTGACACTGGACT
TTCACGGATTGTTTCAATTGTCTCCCTGTCGCTGCCATTGTTGATGGCAA
AATTTTCTGCATGCATGGTGGCTTGAGCCCCGAACTCCATCACATGGACC
AGCGATTACGTGGACCGAGGCAAGCAATCGCTTGAGACGATCTGCCTCCT
CCTCGCGTACAAGATCATGTACCCCGAGAATTTCTTCATCCTCCGAGGGA
ACCATGAATGTGCCTCCGTGAACCGGATCTACGGCTTCTACGACGAATGC
AAACGTCGGTACAACATCAAACTCTGGAAGGTAACCCTGACCGAAGACGA
GGTAAAAATGCTGTGTCAACGGTCGCGGGAAATCTTTCTCACTCAGCCCA
TCCTCATCGAAGTGGAAGCCCCCGTCAAGATCTGCGGAGACCTCCACGGC
CAGTATTACGACCTGTTACGCCTGTTTGAATACGGGGGCTACCCACCGGA
GAGCAATTATCTTTTTCTTGGATGGAAGTGGTCTCCGCTGCCATTTCTGC
GTCTTCTGCCGCTCCCAGCACGACTGGAGGAGGAGGAAACACGGCTGCAC
CCTCTGATGCTGTTCTTTCAGAAGTAGGAGTCATCATTGAGAAGCTCTTG
GCCGTGCGAGGGACGCGTCAGTCGAGTAACATGCAG back to top
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