EWM27366.1, cds3306 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27366.1 vs. NCBI_GenBank
Match: gi|585109584|gb|EWM27366.1| (hypothetical protein Naga_100520g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 248.825 bits (634), Expect = 1.516e-83 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 Query: 1 REGQRVRRAGKEVVDRALKLSFGSLSPAPSSRPALTSHPPLSPPPQGAGGFAADTLLFSLDLKGEGFKSALSASASAPSPRGWYGHCVTRTEGYVVVGGLAPDNSRLGDVWILEEEGVEGGREGEL 126 REGQRVRRAGKEVVDRALKLSFGSLSPAPSSRPALTSHPPLSPPPQGAGGFAADTLLFSLDLKGEGFKSALSASASAPSPRGWYGHCVTRTEGYVVVGGLAPDNSRLGDVWILEEEGVEGGREGEL Sbjct: 1 REGQRVRRAGKEVVDRALKLSFGSLSPAPSSRPALTSHPPLSPPPQGAGGFAADTLLFSLDLKGEGFKSALSASASAPSPRGWYGHCVTRTEGYVVVGGLAPDNSRLGDVWILEEEGVEGGREGEL 126
BLAST of EWM27366.1 vs. NCBI_GenBank
Match: gi|682358129|gb|KFY47239.1| (hypothetical protein V495_02045 [Pseudogymnoascus sp. VKM F-4514 (FW-929)] >gi|682383153|gb|KFY65641.1| hypothetical protein V497_01334 [Pseudogymnoascus sp. VKM F-4516 (FW-969)]) HSP 1 Score: 58.151 bits (139), Expect = 1.974e-7 Identity = 36/81 (44.44%), Postives = 47/81 (58.02%), Query Frame = 0 Query: 38 HPPLSPPPQGAGGFAADTLLFSLDLKGEGFKSALSASASAPSPRGWYGHCVTR----TEGYVVVGGLAPDNSRLGDVWILE 114 H P S GAG + +++ D+ G G+ + L A +AP PRGW+ V + E VV GGLA DNSRLGDVWI+E Sbjct: 257 HDPSSLGHSGAGKMLGN--VWAYDITGGGW-TELKADGNAPQPRGWFDADVAKDAKGKEVIVVHGGLAEDNSRLGDVWIME 334
BLAST of EWM27366.1 vs. NCBI_GenBank
Match: gi|682279685|gb|KFY01173.1| (hypothetical protein V490_01042 [Pseudogymnoascus sp. VKM F-3557]) HSP 1 Score: 57.3806 bits (137), Expect = 3.481e-7 Identity = 36/81 (44.44%), Postives = 46/81 (56.79%), Query Frame = 0 Query: 38 HPPLSPPPQGAGGFAADTLLFSLDLKGEGFKSALSASASAPSPRGWYGHCVTR----TEGYVVVGGLAPDNSRLGDVWILE 114 H P S GAG + +++ D+ G G + L A +AP PRGW+ V + E VV GGLA DNSRLGDVWI+E Sbjct: 257 HDPSSLGHSGAGKMLGN--VWAYDITG-GVWTELKADGNAPQPRGWFDADVAKDAKGKEVIVVHGGLAEDNSRLGDVWIME 334
BLAST of EWM27366.1 vs. NCBI_GenBank
Match: gi|1022801024|ref|XP_016213241.1| (hypothetical protein PV09_05580 [Verruconis gallopava] >gi|759226385|gb|KIW03372.1| hypothetical protein PV09_05580 [Verruconis gallopava]) HSP 1 Score: 56.9954 bits (136), Expect = 5.465e-7 Identity = 35/80 (43.75%), Postives = 44/80 (55.00%), Query Frame = 0 Query: 34 ALTSHPPLSPPPQGAGGFAADTLLFSLDLK-GEGFKSALSASASAPSPRGWYGHCVTRTEGYVVVGGLAPDNSRLGDVWI 112 A P S QGAG +D +++ D+K + FK AP PRGW+ V T+ VV GGLA DNSRLGDVW+ Sbjct: 254 AFGERDPSSLGHQGAGKMLSD--VWAYDIKEHQWFKVEAEGGDEAPEPRGWFAADVLGTDTIVVHGGLAEDNSRLGDVWL 331 The following BLAST results are available for this feature:
BLAST of EWM27366.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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