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Properties
| Property Name | Value |
|---|
| Product | serine threonine-prot |
| Orig transcript id | gnl|cribi|Naga_100212g10.2171.mrna |
| Orig protein id | gnl|cribi|Naga_100212g10.2171 |
| Gene | MCPK |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1209198..1211271 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3276 ID=rna3276|Name=rna3276|organism=Nannochloropsis gaditana|type=mRNA|length=807bp
TCCAAACGACAGGATCATTACAGAAGTATGGAAGCGGCAGAATGGGAAAT
TAGCAAGGAGAATGTGATGCCTTTGAAGCATGGGCGCAATGTCAGCAAGC
TCAATGCAACTTTGTCTGAAAAGCCGAAAGGTATGCGCGAGAGAAGAGCT
GACCTGGAAACAGAAAGACAAGCCTTCGAAAACCGGTTGCAGGAAGTGGA
AGAGCGCTTCCTGCAGAATAAGGAGGGGGAGGATCCCTTGAGGGAGTGGG
TGAGGTACATCAATTGGCTACAAGAGGCCATGCCATCCGACAGTCAGGAG
GCGACACTCGTGTTGGAACGCTGTGCCCGCCGCTTTCAAGAAGAAGCTCT
GTACAAACAGGATCCCCGGTATCTGAAGATTTGGATCAGCTACGCCGACC
GATTGAGCAGTCCCGGAGAAATTTTCAAGTTTCTGCACAAGAAGAAGATC
GGAACGACGCAAGCCCTCTTCTGGGCCGCCTGGGCTTTTGTGGCGGAGAA
GTCGGGGAACTTCTCCCTCGCAGACAAGCTGTACACCAAGGGCATCGAGC
TCCACGCGCTGCCCATCGAGCTGCTGGCAGAGCGTCGGCATCACTTCCAA
AGGCGCATGTCGCGGCACTGGCTGAGATTGAACGAGGAAGGACGCGCGGC
GGCGTTCGAGGGCGGAGATGAAGGCGGGCCGGAGGGCAGGGGAGGGAGAA
GCGCACTGGCGACGAAGAAAGAGAAGAGGCGCACCGTCAACGGCGCGTCT
CGGCCATCCTCTGCTGCCTCCTCCTCCGCGCGTACGCCTTCGTCTCGCGT
ACTCTGA back to topprotein sequence of rna3276 >rna3276-protein ID=rna3276-protein|Name=rna3276|organism=Nannochloropsis gaditana|type=polypeptide|length=293bp
MLALGHGRHPPRPSALAYCHKGWKYVVRKRTITSFLPPASYLNTPPSDIA
FSSPSLSGLPEPLALHYTLQMLRVIRRLWVEGGMLHCDIRCDNFLMVGQG
SLMVIDLGVSLDVRGAEEDQEESVEIQFLGGRAASGYQCRAMRAERSSKR
DHGIQEGEMKRGWREDADLYALGASAYCLLHGHSPPSVYFADDMKGNEMK
SKKAMKPTCCKGANYWRLKRYWEQEAWTRVLEGLMGADIESLRPTQAVQR
LDELCDVLKEVLEGPKGKGLSCLLETVAREMGPFLAGVRAGRL back to topmRNA from alignment at CM002460.1:1209198..1211271+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3276 ID=rna3276|Name=rna3276|organism=Nannochloropsis gaditana|type=mRNA|length=2074bp|location=Sequence derived from alignment at CM002460.1:1209198..1211271+ (Nannochloropsis gaditana)
ctttctcaGCCAAGTcactccccgtcctctcatCCTCGACGCCTCCGACA
CACAcatcgccatctcctccctgcctccctcttcccgccttcgcGACCAT
CGCCCgcggctcctccctcatcatcttcccaagccacttcctccctccag
cagcGGGACACGGCCCAAGGTaagtttcccctccccctccccctcattgT
ACGCGTTCCCACAACCAACTTTTCGCATTTCTTGTCCAACACTATCGATA
CTTCCCGCATCCTACTCTACTCGTAGGTCCGTCTGGACCCCTCGGAGCCG
CTCCACACTCTTCTCGGCGTCCTGGGAAGGGGCACGTACGGCGTGGTCTA
CCATCTCAAGTGCCCGACGGCGGGAGAGGTAGATTTCGCAGTTAAGGTAA
GATCACAAAGACGGATGGGTGGGCGCTTGTGCCGCTTATTTGGATGGGGA
ACCTCGAGGATGGGAGCCACAGCTTTAAGGAAGACGAGCCGAACCACTCG
CCGGCGTTGCGCCTGGGCTCTCTTTACCATAACCCTGACCCTTTCTTGCC
TGTCATTCAGGTGGAAACGGTTGATCCCGCCTCTCCTGACGCCACACTCC
CCTACGAGTTCCACATGCTCTCCTTGTTGGAAGAACGGGTAAAGTCACAG
GCAAGTCCTAAAGGATACTGtcagaggacaaggagggtcCATGCTCCTTG
GGGCTTTACTTTTTCTCGAGCCCTGACTTATCTTTCCTGTCGCACATTTA
GGGTCGTCGGGATCATAAAGCTGCTGCACCGCCCGTCgagcctcccttct
tccttgctCCCACTGCCTTGCACCTGTTTAAGAATGGTTCCGCCCTATGC
TTGCCCTTGGGCACGGACGGCACCCTCCACGACCTTCTGCGCTGGCATAC
TGCCACAAGGGGTGGAAGTATGTAGTGCGGAAGAGGACCAtcacctcttt
ccttccaccaGCCTCTTATCTCAATACTCCTCCTTCTGAcattgcctttt
cctccccctctctctcaggTTTGCCTGAGCCTCTTGCTCTGCATTACACC
CTTCAAATGCTACGCGTCATCCGTAGACTCTGGGTTGAAGGAGGTATGTT
GCACTGCGACATTAGATGCGATAATTTTCTCATGGTGGGGCAGGGAAGCT
TGATGGTCATCGACCTTGGTGTGAGCTTGGATGTGCGAGgtgcagaggag
gaccaAGAGGAAAGTGTCGAAATCCAATTTTTGGGGGGCAGAGCAGCGTC
GGGGTATCAATGTCGAGCTATGCGAGCAGAAAGATCAAGTAAGCGCGACC
ATGGCattcaagaaggagagatgaaaagaggatggagggaagacgcagaT
TTGTATGCCTTAGGTGCCTCAGCCTACTGCTTGCTGCATGGACACTCTCC
CCCTTCTGTGTATTTTGCTGATGACATGAAAGGCAATGAGATGAAGTCTA
AAAAAGCAATGAAACCGACTTGCTGCAAGGGAGCGAACTATTGGAGGCTG
AAGCGGTACTGGGAGCAGGAAGCGTGGACGAGAGTCCTTGAGGGGCTGAT
GGGAGCGGACATAGAATCGCTGAGGCCAACACAGGCAGTCCAGCGACTTG
ACGAACTATGTGATGTCTTAAAAGAAGTTTTGGAAGGTccaaagggaaaa
ggattgTCTTGCCTCTTGGAAACTGTAGCACGAGAGATGGGGCCATTTCT
TGCTGGAGTGCGGGCTGGACGATTGTGAGGGAGAAAGCTGTGAAGAGGAT
TTAAACCCCATACTGTTTCATAATTTAAAATATCACAGGAGAATGTTGCC
AAAATGTCGTGTAAACATTGCTTGAGCTGGGAACGTTGTCAGGATTGGGA
GGTTGTATTTCAAATAACCGTTTATGTAACAGAAATGCGCGCCGAGCTCC
CGCATTAAAGTGTTGTTGGGAATACATGGGTATTGTATCCAGTTTGAACA
GAAACTTGAAAAGACATGATTGTACAATCAGCAACCGAAGGTAATTAAGT
GTTTGATGAACTCACTAAACCGATGAAATTTTCTACATTCAAATATTCTA
GCAGTCCATAATTCAAACGACGCT back to topCoding sequence (CDS) from alignment at CM002460.1:1209198..1211271+ >rna3276 ID=rna3276|Name=rna3276|organism=Nannochloropsis gaditana|type=CDS|length=882bp|location=Sequence derived from alignment at CM002460.1:1209198..1211271+ (Nannochloropsis gaditana)
ATGCTTGCCCTTGGGCACGGACGGCACCCTCCACGACCTTCTGCGCTGGC
ATACTGCCACAAGGGGTGGAAGTATGTAGTGCGGAAGAGGACCAtcacct
ctttccttccaccaGCCTCTTATCTCAATACTCCTCCTTCTGAcattgcc
ttttcctccccctctctctcaggTTTGCCTGAGCCTCTTGCTCTGCATTA
CACCCTTCAAATGCTACGCGTCATCCGTAGACTCTGGGTTGAAGGAGGTA
TGTTGCACTGCGACATTAGATGCGATAATTTTCTCATGGTGGGGCAGGGA
AGCTTGATGGTCATCGACCTTGGTGTGAGCTTGGATGTGCGAGgtgcaga
ggaggaccaAGAGGAAAGTGTCGAAATCCAATTTTTGGGGGGCAGAGCAG
CGTCGGGGTATCAATGTCGAGCTATGCGAGCAGAAAGATCAAGTAAGCGC
GACCATGGCattcaagaaggagagatgaaaagaggatggagggaagacgc
agaTTTGTATGCCTTAGGTGCCTCAGCCTACTGCTTGCTGCATGGACACT
CTCCCCCTTCTGTGTATTTTGCTGATGACATGAAAGGCAATGAGATGAAG
TCTAAAAAAGCAATGAAACCGACTTGCTGCAAGGGAGCGAACTATTGGAG
GCTGAAGCGGTACTGGGAGCAGGAAGCGTGGACGAGAGTCCTTGAGGGGC
TGATGGGAGCGGACATAGAATCGCTGAGGCCAACACAGGCAGTCCAGCGA
CTTGACGAACTATGTGATGTCTTAAAAGAAGTTTTGGAAGGTccaaaggg
aaaaggattgTCTTGCCTCTTGGAAACTGTAGCACGAGAGATGGGGCCAT
TTCTTGCTGGAGTGCGGGCTGGACGATTGTGA back to top
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