EWM27404.1, cds3267 (CDS) Nannochloropsis gaditana

Overview
NameEWM27404.1
Unique Namecds3267
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1210044..1210925 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27404.1
Productserine threonine-prot
Orig transcript idgnl|cribi|Naga_100212g10.2171.mrna
GeneMCPK
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1210044..1210925 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0016043cellular component organization
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
Homology
BLAST of EWM27404.1 vs. NCBI_GenBank
Match: gi|585109635|gb|EWM27404.1| (serine threonine-prot [Nannochloropsis gaditana])

HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
Query:    1 MLALGHGRHPPRPSALAYCHKGWKYVVRKRTITSFLPPASYLNTPPSDIAFSSPSLSGLPEPLALHYTLQMLRVIRRLWVEGGMLHCDIRCDNFLMVGQGSLMVIDLGVSLDVRGAEEDQEESVEIQFLGGRAASGYQCRAMRAERSSKRDHGIQEGEMKRGWREDADLYALGASAYCLLHGHSPPSVYFADDMKGNEMKSKKAMKPTCCKGANYWRLKRYWEQEAWTRVLEGLMGADIESLRPTQAVQRLDELCDVLKEVLEGPKGKGLSCLLETVAREMGPFLAGVRAGRL 293
            MLALGHGRHPPRPSALAYCHKGWKYVVRKRTITSFLPPASYLNTPPSDIAFSSPSLSGLPEPLALHYTLQMLRVIRRLWVEGGMLHCDIRCDNFLMVGQGSLMVIDLGVSLDVRGAEEDQEESVEIQFLGGRAASGYQCRAMRAERSSKRDHGIQEGEMKRGWREDADLYALGASAYCLLHGHSPPSVYFADDMKGNEMKSKKAMKPTCCKGANYWRLKRYWEQEAWTRVLEGLMGADIESLRPTQAVQRLDELCDVLKEVLEGPKGKGLSCLLETVAREMGPFLAGVRAGRL
Sbjct:    1 MLALGHGRHPPRPSALAYCHKGWKYVVRKRTITSFLPPASYLNTPPSDIAFSSPSLSGLPEPLALHYTLQMLRVIRRLWVEGGMLHCDIRCDNFLMVGQGSLMVIDLGVSLDVRGAEEDQEESVEIQFLGGRAASGYQCRAMRAERSSKRDHGIQEGEMKRGWREDADLYALGASAYCLLHGHSPPSVYFADDMKGNEMKSKKAMKPTCCKGANYWRLKRYWEQEAWTRVLEGLMGADIESLRPTQAVQRLDELCDVLKEVLEGPKGKGLSCLLETVAREMGPFLAGVRAGRL 293          
BLAST of EWM27404.1 vs. NCBI_GenBank
Match: gi|397632366|gb|EJK70521.1| (hypothetical protein THAOC_08106 [Thalassiosira oceanica])

HSP 1 Score: 76.6406 bits (187), Expect = 5.521e-12
Identity = 64/237 (27.00%), Postives = 104/237 (43.88%), Query Frame = 0
Query:   11 PRPSALAYCHKGWKYVVRKRTITSFLPPASYLNTPPSDIAFSSPSLSGLPEPLALHYTLQMLRVIRRLWVEGGMLHCDIRCDNFLMV---GQGSLMVIDLGVSLDVR--GAEEDQEESVEIQFLGGRAASGYQCRAMRAERSSKRDHGIQEGEMKRGWREDADLYALGASAYCLLHGHSPPSVYFADDMKGNEMKSKKAMKPTCCKGANYWRL----KRYWEQEAWTRVLEGLMGAD 238
            PRP +L    +G  +++   + + F    + L+     +   +  +  +PE +A++YT +ML  I  L  EG +LH D++ DN+++    G+  LM++D G S+D+   G   D    +  QF G  AA   +C AMR  R                W  D DL+ L +SA+ LL G                      ++ T  K    WRL    +RY +Q+ W+   E L+  D
Sbjct: 1017 PRPKSLYAFKEGGTFLMTAASYSGF----TLLDV----VNIFNKIIGKVPELVAIYYTSRMLEHIETLHREGKVLHNDVKADNWVITSSAGKFDLMLVDFGRSVDLERTGGTSD---PIRSQFKGNVAAEDTECVAMRESRP---------------WGIDQDLFGLCSSAHLLLFGSH--------------------IEVTEEKSTGKWRLRKAFRRYHQQDLWSCFFETLVNYD 1207          
BLAST of EWM27404.1 vs. NCBI_GenBank
Match: gi|612393348|ref|XP_007512194.1| (predicted protein [Bathycoccus prasinos] >gi|424513660|emb|CCO66282.1| predicted protein [Bathycoccus prasinos])

HSP 1 Score: 74.7146 bits (182), Expect = 2.784e-11
Identity = 61/253 (24.11%), Postives = 109/253 (43.08%), Query Frame = 0
Query:   58 GLPEPLALHYTLQMLRVIRRLWV-EGGMLHCDIRCDNFLMVGQGS-----------------LMVIDLGVSLDVRGAEEDQEESVEIQFLGGRAASGYQCRAMRAERSSKRDHGIQEGEMKRGWREDADLYALGASAYCLLHGHSPPSVYFADDMKGNEMKSKKAMKPTCCKGANYWRLKRYWEQEAWTRVLEGLMGADIESLRPTQAVQRLDELCDVLKEVLEGPKGKGLSCLLETVAREMGPFLAGVRAGR 292
             + E LA++Y++++LR++   W  E  +LHCD++ DN L+   G                  L +ID G ++D+R  + +       QF+G      + C  MR  +S               W   +D +A+ A+ + +LHG    ++    D K  +   K A             LKRYW Q+ W  V E LM     + + T+    L  + +VL++ L+G +G G S +   + ++       ++ G+
Sbjct:  965 AMDEKLAMYYSIELLRLLE--WTHESDVLHCDVKPDNLLLRNGGERWLDWDKSRPGSWKKKGLALIDFGRAIDLRDYDANT------QFVGNAGTESFSCPEMRENKS---------------WTYQSDCFAIAATIHVMLHGEYMETI---TDRKMGKYAPKLA-------------LKRYWNQDVWKLVFEKLMNQ--PTTKSTKEKPNLRAIREVLEDALDG-EGTGGSVVKSLLVKQTIGMFELIKEGK 1175          
The following BLAST results are available for this feature:
BLAST of EWM27404.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585109635|gb|EWM27404.1|0.000e+0100.00serine threonine-prot [Nannochloropsis gaditana][more]
gi|397632366|gb|EJK70521.1|5.521e-1227.00hypothetical protein THAOC_08106 [Thalassiosira oc... [more]
gi|612393348|ref|XP_007512194.1|2.784e-1124.11predicted protein [Bathycoccus prasinos] >gi|42451... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3276rna3276Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications