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Properties
| Property Name | Value |
|---|
| Product | retinol dehydrogenase 14 |
| Orig transcript id | gnl|cribi|Naga_100237g3.1701.mrna |
| Orig protein id | gnl|cribi|Naga_100237g3.1701 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1197147..1198974 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3273 ID=rna3273|Name=rna3273|organism=Nannochloropsis gaditana|type=mRNA|length=1380bp
ATGGCTACCTCGACTGAATTCATGGATACTGCTAACAATCATATTACTAT
GCCTTTGGTTGCTGCTCCGCATCAGCTTGCTGGGGCGATGGCGATTCACG
AAGCAACGCGCAATAAAGACTTTGTTGCCTTAGACCGCCTTTTAAATGAA
AACAAAAGCCTGATCCATGCCCCTGACGTGGTAGGACGCTCACCTTTGAT
GATGAGTAGTTTAAGGGGTCATGTAGATGTTTGTGAATGGCTTCTCGACC
ACGGAGCGCCATTGAATGCTGTAGACATCAACAGACGCTCAGCTATGTAT
AACGCTGCCTCGTACGGGTTTGTGCAAGTCGTCAAATTGCTGATGGAGCG
GGGTGCAGATCCTAAAATTGGAGACTGTGAAGGAAATGTACCTATAATTG
CAGCTGCCTATTATGGGTACGAGGACGTGGTACGCTACCTATTAGATTCT
AAGCATGGGCAAGACCCTGACGACCTCGACCGGAAGGGGGAGCGACGGTG
GACTGGACTCTACCTTTCTTGTGAGGCAGGCTACGTAAAAATCGCCCGAA
TGTTCCTTCAGGTAGGGGCAGACCCAACCATTGCCGACAATCACGGCTTC
ACGCCTCTGGAGGTTGCGCGAAAGATGAGCAATTGGCGGTGTGCTCGCCT
TTTGGAACGGGCTCTGCGGGAGCCAGCGCGGGTAGCGTGTTTGGTCAAGG
CCCATGCCCTTATGGAATCCAAGTACGTGATGAAAGAAGGTGTTAAGGCG
ATGGACGGAAGGAGGGGAGACAATATTTTTAGAATGAAGACCAGGATGAC
GCAAAAAAATAAGTTCTTGGAGGTGACTCCTCCTTTCTTACGCATGAGAG
TAGAGAATAAGCAGCCCTTACCCGTTGTAGATATTGGAGGTGCAAAGGTC
ATATCAAGTACTTTGCAGGGAGAAAAGAAAAGAAGGACTAGGAAGCGGGC
TGGCTCCCTGCGCTCGGCGAAACGAAGAAGGGGAGAGCTAAGAGAAGGAA
AAATCGACCTTGGGAAAAAAATTCTGCTTCAAGAGCAAGCAGCAAATCAA
AGCAAGTGCAGTGATACTGGGTATGAAGGAACACAGCCGATATTAATCCA
TGAAAGTAGGCAGAAGGTGGCGCGCTATCATACAGATGAAGAGCACTACG
GAAGTGGAGCGGGCTTAGGGAGCAGGACCAATGCCATCTCCTCCATATTT
TTGTCGCCGATATTTTTCCAGACATTACAAGATGGGAAAAATACAACGAT
AGGGGACGCTGAGAAAGAGGAAGAAGAAGATGAGGTTGTAGCTGTGACAA
GATATCTGGTACAAGGAAGACTGCCTCGGGAGCTTTTCAATGAAGTGGTT
GAGATGATGACCCCCCGTTGGATGAGCTGA back to topprotein sequence of rna3273 >rna3273-protein ID=rna3273-protein|Name=rna3273|organism=Nannochloropsis gaditana|type=polypeptide|length=497bp
MEMLIEATVGLAGAASSVALYRGIKRRLCPSQEERDFYAMDGSMAGRTVL
VTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPP
SSSPWGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRL
RRREPRLHVLVNNAGALFPKRELVDVWKREEQEGRGEGEGKRESLLVERT
MATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCW
VRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYL
HRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGM
VHTALNRSLLPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGG
GFWALEARKKEEERREKGWDVVEVASSPEAEDIVLAHKLWVRPHGIECES
FDEGVERTFKYQHVQSIVLSFQRKIFLFSHRTSHILKSKKNPLVPVY back to topmRNA from alignment at CM002460.1:1197147..1198974- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3273 ID=rna3273|Name=rna3273|organism=Nannochloropsis gaditana|type=mRNA|length=1828bp|location=Sequence derived from alignment at CM002460.1:1197147..1198974- (Nannochloropsis gaditana)
GCATCAGGTGCTCGCAATGGAGATGCTAATTGAAGCCACCGTGGGTCTTG
CAGGTGCCGCTTCTTCCGTGGCCCTGTATAGGGGTATCAAACGTAGGCTG
TGTCCGTCTCAGGAAGAAAGAGATTTCTACGCGATGGACGGCAGTATGGC
GGGGCGTACGGTCCTGGTAACAGGCGCGAACAGCGGGGTGGGACGGGCAG
CAGCGGAGATCTTGGCACGCAAGGTTCGTGAAATTGGGGAGGCATTCCTT
TAATCTTTGTTAAGGCCGAGGCATTATGGAGGGGGCATAGGAGCCGGGAG
TGTCCCGGGCTGGACGTGGTCAGGTTCAGGAGGAATGCCGCCAACGCAGG
CCGCGTTCTCTCTCACGCATTCCCCCGCTCCTCTTCCTCCCCTTTCTCCT
CACTCTAGGGGGCCCACGTCATGTGCGCCTGTCGAGACATGCCTAAAGCG
GAGGCCACCGCCTCTGCCATCAACCGACGCCTTCCCCGCACCGTGCCCCC
CTCCTCTTCCCCCTGGGGCCGTGCATCTCCGGCTCCTGCGCCGCTGGACC
TGGCCTCTCTGGCCAGCGTACGGGCGTTCGTGGACGCTTTTGAGAGAGAG
CGAGGGGAAGAAGGGGAGGAGGAGCAAAAGAGGAACGAGGACAGGAGGTT
GCGGCGAAGAGAGCCGCGATTGCACGTGCTCGTGAACAATGCGGGGGCGC
TCTTTCCGAAGCGAGAGCTCGTGGATGTTTGGAAAAGGGAGGAGCAGGAA
GGGAGGGGGGAGGGAGAGGGCAAGCGAGAGAGCCTGTTGGTGGAGAGGAC
GATGGCCACGAACCACCTGGGGCCCTTCCTCCTCACTGCCCTCCTCCTTC
CCACCCTCAAAGAGACGGGCCGGGCGGAGGGACGCCCTTCGAGGGTGGTC
ATGGTCTCCTCCAGGCTGGAGAAGGGGAAGGGCGAGTATCTGGACTGCTG
GGTCCGGGATCCCACCCTCACTCCCGCGGAGGACCAGGACCCGAAGGAGG
AAGGGGAAGAGGAAGGGGGCCCCGTGGCCAGTCCTCCGTACCGACCCTTT
TTGGCCTACGGGGCGAGCAAGCTGGCCAATCTGCTGGCGGTGCGTGAGAT
CCACCTGCCCTTTTGCCCAACACCCTTCATCATGATCTTATCTTTCCCTC
CTTCCCTTCCTGCTCGCGCCCTTTCAGGTGACTTACTTGCACCGGCAGCA
GCAAGGATGGTCGCTGCCCGACGCCACGCACCAACCGCCAACGACCACCA
CCCCCCCGTCGCTTCTCCTCGGACCGTCCACGCACCGATGGGACCCGTCC
GACCAGCACGTCTCTGTCTATGGATGCACGCCCGGCATGGTGCACACGGC
CCTCAATCGATCCCTGCTGCCTGGCTTTGTTCGCGTCCTTTTCTGGCCTC
TTAGCTACTCTCTGCTGCAGACGCCCTTCGAGGGCGCGCGGCCTGTGGTC
TTTTTAGCCGCGTCCGACAGGGTCGAGGGCAGGGGGGGAGGATTCTGGGC
GCTGGAAGCGCGGAAGAAGGAGGAAGAAAGACGGGAGAAGGGGTGGGACG
TGGTGGAGGTAGCTTCGAGCCCGGAGGCAGAAGACATCGTGCTGGCCCAT
AAGTTGTGGGTTCGGTGTGAAGAGATGGTGGCCCCCTTTTCCAAGACGTA
GGCACTCAGGCCACATGGAATCGAGTGCGAGAGCTTCGATGAAGGAGTAG
AAAGGACATTCAAATATCAGCATGTACAGTCCATCGTATTGTCTTTTCAA
AGAAAGATCTTTCTATTTAGCCATCGCACTAGTCATATACTGAAATCTAA
AAAAAATCCATTGGTACCCGTATATTGA back to topCoding sequence (CDS) from alignment at CM002460.1:1197147..1198974- >rna3273 ID=rna3273|Name=rna3273|organism=Nannochloropsis gaditana|type=CDS|length=5976bp|location=Sequence derived from alignment at CM002460.1:1197147..1198974- (Nannochloropsis gaditana)
GCCACATGGAATCGAGTGCGAGAGCTTCGATGAAGGAGTAGAAAGGACAT
TCAAATATCAGCATGTACAGTCCATCGTATTGTCTTTTCAAAGAAAGATC
TTTCTATTTAGCCATCGCACTAGTCATATACTGAAATCTAAAAAAAATCC
ATTGGTACCCGTATATTGAGTGACTTACTTGCACCGGCAGCAGCAAGGAT
GGTCGCTGCCCGACGCCACGCACCAACCGCCAACGACCACCACCCCCCCG
TCGCTTCTCCTCGGACCGTCCACGCACCGATGGGACCCGTCCGACCAGCA
CGTCTCTGTCTATGGATGCACGCCCGGCATGGTGCACACGGCCCTCAATC
GATCCCTGCTGCCTGGCTTTGTTCGCGTCCTTTTCTGGCCTCTTAGCTAC
TCTCTGCTGCAGACGCCCTTCGAGGGCGCGCGGCCTGTGGTCTTTTTAGC
CGCGTCCGACAGGGTCGAGGGCAGGGGGGGAGGATTCTGGGCGCTGGAAG
CGCGGAAGAAGGAGGAAGAAAGACGGGAGAAGGGGTGGGACGTGGTGGAG
GTAGCTTCGAGCCCGGAGGCAGAAGACATCGTGCTGGCCCATAAGTTGTG
GGTTCGGGGGCCCACGTCATGTGCGCCTGTCGAGACATGCCTAAAGCGGA
GGCCACCGCCTCTGCCATCAACCGACGCCTTCCCCGCACCGTGCCCCCCT
CCTCTTCCCCCTGGGGCCGTGCATCTCCGGCTCCTGCGCCGCTGGACCTG
GCCTCTCTGGCCAGCGTACGGGCGTTCGTGGACGCTTTTGAGAGAGAGCG
AGGGGAAGAAGGGGAGGAGGAGCAAAAGAGGAACGAGGACAGGAGGTTGC
GGCGAAGAGAGCCGCGATTGCACGTGCTCGTGAACAATGCGGGGGCGCTC
TTTCCGAAGCGAGAGCTCGTGGATGTTTGGAAAAGGGAGGAGCAGGAAGG
GAGGGGGGAGGGAGAGGGCAAGCGAGAGAGCCTGTTGGTGGAGAGGACGA
TGGCCACGAACCACCTGGGGCCCTTCCTCCTCACTGCCCTCCTCCTTCCC
ACCCTCAAAGAGACGGGCCGGGCGGAGGGACGCCCTTCGAGGGTGGTCAT
GGTCTCCTCCAGGCTGGAGAAGGGGAAGGGCGAGTATCTGGACTGCTGGG
TCCGGGATCCCACCCTCACTCCCGCGGAGGACCAGGACCCGAAGGAGGAA
GGGGAAGAGGAAGGGGGCCCCGTGGCCAGTCCTCCGTACCGACCCTTTTT
GGCCTACGGGGCGAGCAAGCTGGCCAATCTGCTGGCGATGGAGATGCTAA
TTGAAGCCACCGTGGGTCTTGCAGGTGCCGCTTCTTCCGTGGCCCTGTAT
AGGGGTATCAAACGTAGGCTGTGTCCGTCTCAGGAAGAAAGAGATTTCTA
CGCGATGGACGGCAGTATGGCGGGGCGTACGGTCCTGGTAACAGGCGCGA
ACAGCGGGGTGGGACGGGCAGCAGCGGAGATCTTGGCACGCAAGGCCACA
TGGAATCGAGTGCGAGAGCTTCGATGAAGGAGTAGAAAGGACATTCAAAT
ATCAGCATGTACAGTCCATCGTATTGTCTTTTCAAAGAAAGATCTTTCTA
TTTAGCCATCGCACTAGTCATATACTGAAATCTAAAAAAAATCCATTGGT
ACCCGTATATTGAGTGACTTACTTGCACCGGCAGCAGCAAGGATGGTCGC
TGCCCGACGCCACGCACCAACCGCCAACGACCACCACCCCCCCGTCGCTT
CTCCTCGGACCGTCCACGCACCGATGGGACCCGTCCGACCAGCACGTCTC
TGTCTATGGATGCACGCCCGGCATGGTGCACACGGCCCTCAATCGATCCC
TGCTGCCTGGCTTTGTTCGCGTCCTTTTCTGGCCTCTTAGCTACTCTCTG
CTGCAGACGCCCTTCGAGGGCGCGCGGCCTGTGGTCTTTTTAGCCGCGTC
CGACAGGGTCGAGGGCAGGGGGGGAGGATTCTGGGCGCTGGAAGCGCGGA
AGAAGGAGGAAGAAAGACGGGAGAAGGGGTGGGACGTGGTGGAGGTAGCT
TCGAGCCCGGAGGCAGAAGACATCGTGCTGGCCCATAAGTTGTGGGTTCG
GGGGCCCACGTCATGTGCGCCTGTCGAGACATGCCTAAAGCGGAGGCCAC
CGCCTCTGCCATCAACCGACGCCTTCCCCGCACCGTGCCCCCCTCCTCTT
CCCCCTGGGGCCGTGCATCTCCGGCTCCTGCGCCGCTGGACCTGGCCTCT
CTGGCCAGCGTACGGGCGTTCGTGGACGCTTTTGAGAGAGAGCGAGGGGA
AGAAGGGGAGGAGGAGCAAAAGAGGAACGAGGACAGGAGGTTGCGGCGAA
GAGAGCCGCGATTGCACGTGCTCGTGAACAATGCGGGGGCGCTCTTTCCG
AAGCGAGAGCTCGTGGATGTTTGGAAAAGGGAGGAGCAGGAAGGGAGGGG
GGAGGGAGAGGGCAAGCGAGAGAGCCTGTTGGTGGAGAGGACGATGGCCA
CGAACCACCTGGGGCCCTTCCTCCTCACTGCCCTCCTCCTTCCCACCCTC
AAAGAGACGGGCCGGGCGGAGGGACGCCCTTCGAGGGTGGTCATGGTCTC
CTCCAGGCTGGAGAAGGGGAAGGGCGAGTATCTGGACTGCTGGGTCCGGG
ATCCCACCCTCACTCCCGCGGAGGACCAGGACCCGAAGGAGGAAGGGGAA
GAGGAAGGGGGCCCCGTGGCCAGTCCTCCGTACCGACCCTTTTTGGCCTA
CGGGGCGAGCAAGCTGGCCAATCTGCTGGCGATGGAGATGCTAATTGAAG
CCACCGTGGGTCTTGCAGGTGCCGCTTCTTCCGTGGCCCTGTATAGGGGT
ATCAAACGTAGGCTGTGTCCGTCTCAGGAAGAAAGAGATTTCTACGCGAT
GGACGGCAGTATGGCGGGGCGTACGGTCCTGGTAACAGGCGCGAACAGCG
GGGTGGGACGGGCAGCAGCGGAGATCTTGGCACGCAAGGCCACATGGAAT
CGAGTGCGAGAGCTTCGATGAAGGAGTAGAAAGGACATTCAAATATCAGC
ATGTACAGTCCATCGTATTGTCTTTTCAAAGAAAGATCTTTCTATTTAGC
CATCGCACTAGTCATATACTGAAATCTAAAAAAAATCCATTGGTACCCGT
ATATTGAGTGACTTACTTGCACCGGCAGCAGCAAGGATGGTCGCTGCCCG
ACGCCACGCACCAACCGCCAACGACCACCACCCCCCCGTCGCTTCTCCTC
GGACCGTCCACGCACCGATGGGACCCGTCCGACCAGCACGTCTCTGTCTA
TGGATGCACGCCCGGCATGGTGCACACGGCCCTCAATCGATCCCTGCTGC
CTGGCTTTGTTCGCGTCCTTTTCTGGCCTCTTAGCTACTCTCTGCTGCAG
ACGCCCTTCGAGGGCGCGCGGCCTGTGGTCTTTTTAGCCGCGTCCGACAG
GGTCGAGGGCAGGGGGGGAGGATTCTGGGCGCTGGAAGCGCGGAAGAAGG
AGGAAGAAAGACGGGAGAAGGGGTGGGACGTGGTGGAGGTAGCTTCGAGC
CCGGAGGCAGAAGACATCGTGCTGGCCCATAAGTTGTGGGTTCGGGGGCC
CACGTCATGTGCGCCTGTCGAGACATGCCTAAAGCGGAGGCCACCGCCTC
TGCCATCAACCGACGCCTTCCCCGCACCGTGCCCCCCTCCTCTTCCCCCT
GGGGCCGTGCATCTCCGGCTCCTGCGCCGCTGGACCTGGCCTCTCTGGCC
AGCGTACGGGCGTTCGTGGACGCTTTTGAGAGAGAGCGAGGGGAAGAAGG
GGAGGAGGAGCAAAAGAGGAACGAGGACAGGAGGTTGCGGCGAAGAGAGC
CGCGATTGCACGTGCTCGTGAACAATGCGGGGGCGCTCTTTCCGAAGCGA
GAGCTCGTGGATGTTTGGAAAAGGGAGGAGCAGGAAGGGAGGGGGGAGGG
AGAGGGCAAGCGAGAGAGCCTGTTGGTGGAGAGGACGATGGCCACGAACC
ACCTGGGGCCCTTCCTCCTCACTGCCCTCCTCCTTCCCACCCTCAAAGAG
ACGGGCCGGGCGGAGGGACGCCCTTCGAGGGTGGTCATGGTCTCCTCCAG
GCTGGAGAAGGGGAAGGGCGAGTATCTGGACTGCTGGGTCCGGGATCCCA
CCCTCACTCCCGCGGAGGACCAGGACCCGAAGGAGGAAGGGGAAGAGGAA
GGGGGCCCCGTGGCCAGTCCTCCGTACCGACCCTTTTTGGCCTACGGGGC
GAGCAAGCTGGCCAATCTGCTGGCGATGGAGATGCTAATTGAAGCCACCG
TGGGTCTTGCAGGTGCCGCTTCTTCCGTGGCCCTGTATAGGGGTATCAAA
CGTAGGCTGTGTCCGTCTCAGGAAGAAAGAGATTTCTACGCGATGGACGG
CAGTATGGCGGGGCGTACGGTCCTGGTAACAGGCGCGAACAGCGGGGTGG
GACGGGCAGCAGCGGAGATCTTGGCACGCAAGGCCACATGGAATCGAGTG
CGAGAGCTTCGATGAAGGAGTAGAAAGGACATTCAAATATCAGCATGTAC
AGTCCATCGTATTGTCTTTTCAAAGAAAGATCTTTCTATTTAGCCATCGC
ACTAGTCATATACTGAAATCTAAAAAAAATCCATTGGTACCCGTATATTG
AGTGACTTACTTGCACCGGCAGCAGCAAGGATGGTCGCTGCCCGACGCCA
CGCACCAACCGCCAACGACCACCACCCCCCCGTCGCTTCTCCTCGGACCG
TCCACGCACCGATGGGACCCGTCCGACCAGCACGTCTCTGTCTATGGATG
CACGCCCGGCATGGTGCACACGGCCCTCAATCGATCCCTGCTGCCTGGCT
TTGTTCGCGTCCTTTTCTGGCCTCTTAGCTACTCTCTGCTGCAGACGCCC
TTCGAGGGCGCGCGGCCTGTGGTCTTTTTAGCCGCGTCCGACAGGGTCGA
GGGCAGGGGGGGAGGATTCTGGGCGCTGGAAGCGCGGAAGAAGGAGGAAG
AAAGACGGGAGAAGGGGTGGGACGTGGTGGAGGTAGCTTCGAGCCCGGAG
GCAGAAGACATCGTGCTGGCCCATAAGTTGTGGGTTCGGGGGCCCACGTC
ATGTGCGCCTGTCGAGACATGCCTAAAGCGGAGGCCACCGCCTCTGCCAT
CAACCGACGCCTTCCCCGCACCGTGCCCCCCTCCTCTTCCCCCTGGGGCC
GTGCATCTCCGGCTCCTGCGCCGCTGGACCTGGCCTCTCTGGCCAGCGTA
CGGGCGTTCGTGGACGCTTTTGAGAGAGAGCGAGGGGAAGAAGGGGAGGA
GGAGCAAAAGAGGAACGAGGACAGGAGGTTGCGGCGAAGAGAGCCGCGAT
TGCACGTGCTCGTGAACAATGCGGGGGCGCTCTTTCCGAAGCGAGAGCTC
GTGGATGTTTGGAAAAGGGAGGAGCAGGAAGGGAGGGGGGAGGGAGAGGG
CAAGCGAGAGAGCCTGTTGGTGGAGAGGACGATGGCCACGAACCACCTGG
GGCCCTTCCTCCTCACTGCCCTCCTCCTTCCCACCCTCAAAGAGACGGGC
CGGGCGGAGGGACGCCCTTCGAGGGTGGTCATGGTCTCCTCCAGGCTGGA
GAAGGGGAAGGGCGAGTATCTGGACTGCTGGGTCCGGGATCCCACCCTCA
CTCCCGCGGAGGACCAGGACCCGAAGGAGGAAGGGGAAGAGGAAGGGGGC
CCCGTGGCCAGTCCTCCGTACCGACCCTTTTTGGCCTACGGGGCGAGCAA
GCTGGCCAATCTGCTGGCGATGGAGATGCTAATTGAAGCCACCGTGGGTC
TTGCAGGTGCCGCTTCTTCCGTGGCCCTGTATAGGGGTATCAAACGTAGG
CTGTGTCCGTCTCAGGAAGAAAGAGATTTCTACGCGATGGACGGCAGTAT
GGCGGGGCGTACGGTCCTGGTAACAGGCGCGAACAGCGGGGTGGGACGGG
CAGCAGCGGAGATCTTGGCACGCAAG back to top
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