EWM27409.1, cds3264 (CDS) Nannochloropsis gaditana

Overview
NameEWM27409.1
Unique Namecds3264
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1198752..1198958 -
Alignment locationCM002460.1:1197886..1198566 -
Alignment locationCM002460.1:1197361..1197797 -
Alignment locationCM002460.1:1197147..1197315 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27409.1
Productretinol dehydrogenase 14
Orig transcript idgnl|cribi|Naga_100237g3.1701.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1198752..1198958 -
CM002460.1supercontigCM002460.1:1197886..1198566 -
CM002460.1supercontigCM002460.1:1197361..1197797 -
CM002460.1supercontigCM002460.1:1197147..1197315 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR002198DH_sc/Rdtase_SDR
IPR002347Glc/ribitol_DH
Homology
BLAST of EWM27409.1 vs. NCBI_GenBank
Match: gi|585109642|gb|EWM27409.1| (retinol dehydrogenase 14 [Nannochloropsis gaditana])

HSP 1 Score: 1012.29 bits (2616), Expect = 0.000e+0
Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 0
Query:    1 MEMLIEATVGLAGAASSVALYRGIKRRLCPSQEERDFYAMDGSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSPWGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGALFPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSLLPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWALEARKKEEERREKGWDVVEVASSPEAEDIVLAHKLWVRPHGIECESFDEGVERTFKYQHVQSIVLSFQRKIFLFSHRTSHILKSKKNPLVPVY 497
            MEMLIEATVGLAGAASSVALYRGIKRRLCPSQEERDFYAMDGSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSPWGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGALFPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSLLPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWALEARKKEEERREKGWDVVEVASSPEAEDIVLAHKLWVRPHGIECESFDEGVERTFKYQHVQSIVLSFQRKIFLFSHRTSHILKSKKNPLVPVY
Sbjct:    1 MEMLIEATVGLAGAASSVALYRGIKRRLCPSQEERDFYAMDGSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSPWGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGALFPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSLLPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWALEARKKEEERREKGWDVVEVASSPEAEDIVLAHKLWVRPHGIECESFDEGVERTFKYQHVQSIVLSFQRKIFLFSHRTSHILKSKKNPLVPVY 497          
BLAST of EWM27409.1 vs. NCBI_GenBank
Match: gi|553183784|ref|XP_005853966.1| (retinol dehydrogenase 14 [Nannochloropsis gaditana CCMP526] >gi|422295092|gb|EKU22391.1| retinol dehydrogenase 14 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 889.412 bits (2297), Expect = 0.000e+0
Identity = 441/442 (99.77%), Postives = 441/442 (99.77%), Query Frame = 0
Query:    1 MEMLIEATVGLAGAASSVALYRGIKRRLCPSQEERDFYAMDGSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSPWGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGALFPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSLLPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWALEARKKEEERREKGWDVVEVASSPEAEDIVLAHKLWVR 442
            MEMLIEATVGLAGAASSVALYRGIKRRLCPSQEERDFYAMDGSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSP GRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGALFPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSLLPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWALEARKKEEERREKGWDVVEVASSPEAEDIVLAHKLWVR
Sbjct:    1 MEMLIEATVGLAGAASSVALYRGIKRRLCPSQEERDFYAMDGSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSPCGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGALFPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSLLPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWALEARKKEEERREKGWDVVEVASSPEAEDIVLAHKLWVR 442          
BLAST of EWM27409.1 vs. NCBI_GenBank
Match: gi|594060548|ref|XP_006054376.1| (PREDICTED: retinol dehydrogenase 14 [Bubalus bubalis])

HSP 1 Score: 128.642 bits (322), Expect = 1.070e-29
Identity = 133/410 (32.44%), Postives = 171/410 (41.71%), Query Frame = 0
Query:   26 RRLCPSQEERDFYAMD-GSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSP--WGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGAL-FPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSL-LPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWA------LEARKKEEERREKGWDVVEV 424
            RR   S  +R     D G M G+TVL+TGANSG+GRA A  L R GA V+  CRD  +AE  A  + R +     P S P   G        LDLASL+SVR+F     +E                    EPRL VL+NNAG    P  +  D +                    E     NHLG FLLT LLL  LK +      PSR+V+VSS+L K    Y D    D                      +   Y     Y  SKLAN+L    L R+ +G S                                V+V    PG+V T L R + +P FVR LF  +S++  +TP EGA+  V+LA+S  VEG  G ++       L  +  +E    K WD+ EV
Sbjct:   22 RRFVGSNVQRLHQGGDSGLMRGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRERAEEAAGQLRREVCPAAGPDSGPNSGGAGELVVKELDLASLSSVRSFCQEMLQE--------------------EPRLDVLINNAGVFQCPYMKTEDGF--------------------EMQFGVNHLGHFLLTNLLLGLLKSSA-----PSRIVVVSSKLYK----YGDINFEDLN--------------------SEQSYNKSFCYSRSKLANILFTRELARRLEGTS--------------------------------VTVNVLHPGIVRTNLGRHIHIPLFVRPLFNLVSWAFFKTPEEGAQTAVYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEV 330          
BLAST of EWM27409.1 vs. NCBI_GenBank
Match: gi|1123919855|ref|XP_019610050.1| (PREDICTED: LOW QUALITY PROTEIN: retinol dehydrogenase 14-like [Rhinolophus sinicus])

HSP 1 Score: 127.487 bits (319), Expect = 2.818e-29
Identity = 124/390 (31.79%), Postives = 165/390 (42.31%), Query Frame = 0
Query:   42 GSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSPWGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGALFPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSL-LPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWA------LEARKKEEERREKGWDVVEV 424
            G M G+TVL+TGANSG+GRA A  L R GA V+  CRD  +AE  A  + R L +  P +S P          LDLASL SVRAF     +E                    EPRL VL+NNAG       +      + ++G             E     NHLG FLLT LLL  LK +      PSR+V+VSS+L K    Y D    D                      +   Y     Y  SKLAN+L    L R+ +G                                 +V+V    PG+V T L R + +P  V+ LF  +S++  +TP EGA+  ++LA+S  VEG  G ++       L  +  +E    K WD+ EV
Sbjct:   39 GRMHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRDLRQAXPDASGP---GELVVKELDLASLRSVRAFCQEMLQE--------------------EPRLDVLINNAG-------IFQCPYMKTEDG------------FEMQFGVNHLGHFLLTNLLLGLLKSSA-----PSRIVVVSSKLYK----YGDINFEDLN--------------------SEQSYNKSFCYSRSKLANILFTRELARRLEG--------------------------------TNVTVNVLHPGIVRTNLGRHVHIPLLVKPLFNLMSWAFFKTPVEGAQTSIYLASSSEVEGVSGKYFGDCKEEELLPKAMDESVARKLWDISEV 325          
BLAST of EWM27409.1 vs. NCBI_GenBank
Match: gi|507629816|ref|XP_004627541.1| (PREDICTED: retinol dehydrogenase 14 [Octodon degus])

HSP 1 Score: 127.102 bits (318), Expect = 3.879e-29
Identity = 125/391 (31.97%), Postives = 164/391 (41.94%), Query Frame = 0
Query:   42 GSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSPWGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGAL-FPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSL-LPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWA------LEARKKEEERREKGWDVVEV 424
            G M G+TVL+TGANSG+GRA A  L R GA V+  CRD+ +AE  A  + R L    P  ++  G        LDLASL SVRAF                     R L + EPRL VL+NNAG    P  +  D +                    E     NHLG FLLT LLL  LK +      PSRVV+VSS+L K    Y D    D                      +   Y     Y  SKLAN+L    L R+ +G                                 +V+V    PG+V T L R + +P   + LF  +S++  +TP EGA+  ++LA+S  VEG  G ++       L  +  +E    K WD+ EV
Sbjct:   39 GLMRGKTVLITGANSGLGRATAAELLRLGARVIMGCRDLARAEEAAGQMRRELGGPEPEDAAGAGPGQLVVKELDLASLRSVRAFC--------------------RELLQEEPRLDVLINNAGVFQCPYMKTEDGF--------------------EMQFGVNHLGHFLLTNLLLGLLKSSA-----PSRVVVVSSKLYK----YGDINFEDLN--------------------SEQSYNKSFCYSRSKLANILFTRELARRLEG--------------------------------TNVTVNVLHPGIVRTNLGRHIHIPLLAKPLFNLVSWAFFKTPLEGAQTTIYLASSPEVEGVSGKYFGDCKEEELLPKAMDESVARKLWDISEV 328          
BLAST of EWM27409.1 vs. NCBI_GenBank
Match: gi|311253084|ref|XP_003125388.1| (retinol dehydrogenase 14 [Sus scrofa])

HSP 1 Score: 126.716 bits (317), Expect = 7.124e-29
Identity = 142/437 (32.49%), Postives = 183/437 (41.88%), Query Frame = 0
Query:    7 ATVGLAGAASSVALYRGIKRRLCPSQEERDFYAMDGSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSP--WGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGALFPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSL-LPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWALEARKKEEERREKGWDVVEVASSPEAEDIVLAHKLW 440
            ATV    AA   AL+   +R + PS +        G M G+TVL+TGANSG+GRA A  L R GA V+  CRD  +AE  A  + R L +T  P   P   G        LDLASL SVRAF     +E                    EPRL VL+NNAG       +      + ++G             E   A NHLG FLLT LLL  LK +      PSR+V+VSS+L K    Y D    D                      +   Y     Y  SKLAN+L    L R+ +G                                 +V+V    PG+V T L R + +P  VR LF  +S++  +TP EGA+  V+LA+S  VEG  G ++      KEEE              P+A D  +A KLW
Sbjct:    4 ATVAAFLAALGGALWLAARRFVGPSVQRLHRGGDSGLMHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQTEGPEEGPNSGGAGELVVRELDLASLRSVRAFCQEMLQE--------------------EPRLDVLINNAG-------IFQCPYMKTEDG------------FEMQFAVNHLGHFLLTNLLLGLLKSSA-----PSRIVVVSSKLYK----YGDINFEDLN--------------------SEQSYNKSFCYSRSKLANILFTRELARRLEG--------------------------------TNVTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPAEGAQTSVYLASSPEVEGVSGKYF---GDCKEEELL------------PKAMDDSVARKLW 325          
BLAST of EWM27409.1 vs. NCBI_GenBank
Match: gi|260810577|ref|XP_002600037.1| (hypothetical protein BRAFLDRAFT_221193 [Branchiostoma floridae] >gi|229285322|gb|EEN56049.1| hypothetical protein BRAFLDRAFT_221193 [Branchiostoma floridae])

HSP 1 Score: 125.176 bits (313), Expect = 1.122e-28
Identity = 112/398 (28.14%), Postives = 164/398 (41.21%), Query Frame = 0
Query:   41 DGSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSPWGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGALF--PKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSLLPG------FVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWALEARKKEEERREKG-------WDVVE 423
            +  + G+TV+VTG+N+G+G+  A+ LAR+GA V+ ACRDM KAEA AS I               G  +     LDLASLASVR F                      ++ ++E +L +L+NNAG+++  P       WK  +                E    TNHLG FLLT LLL  +K +      PSR+V+VSS   +    Y D    D  LT                      Y P  AY  SKLAN+L    L R+ +G                 + ++  S H               PG++ T L R++  G        +  FW +  S  +  +EGA+  ++ A  + +E    G +  + R K   R+ +        WD+ E
Sbjct:   16 EAKLDGKTVIVTGSNTGIGKVTAKDLARRGARVIMACRDMTKAEAAASEIRNET-----------GNENVVVEKLDLASLASVREFA--------------------TKINQQEGQLDILINNAGSMYCPP-------WKTADG--------------FEMQFGTNHLGHFLLTNLLLDKIKASA-----PSRIVVVSSIAHESGRMYFD----DLNLT--------------------NNYGPNRAYCQSKLANVLFANELARRLEG-----------------TDVIVSSLH---------------PGVIETELQRNMAEGCGCVYTCCKCCFWCMVRSFGKNQWEGAQTTIYCAVDENIE--KSGLYYSDCRPKRAARQARDEAAAKRLWDLSE 298          
BLAST of EWM27409.1 vs. NCBI_GenBank
Match: gi|556756655|ref|XP_005973677.1| (PREDICTED: retinol dehydrogenase 14 [Pantholops hodgsonii])

HSP 1 Score: 125.946 bits (315), Expect = 1.196e-28
Identity = 132/410 (32.20%), Postives = 171/410 (41.71%), Query Frame = 0
Query:   26 RRLCPSQEERDFYAMD-GSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSP--WGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGAL-FPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSL-LPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWA------LEARKKEEERREKGWDVVEV 424
            RR   S  +R     D G M G+TVL+TGANSG+GRA A  L R GA V+  CRD  +AE  A  + R +  T  P S P   G        LDL+SL+SVR+F     +E                    EPRL VL+NNAG    P  +  D +                    E     NHLG FLLT LLL  LK +      PSR+V+VSS+L K    Y D    D                      +   Y     Y  SKLAN+L    L R+ +G S                                V+V    PG+V T L R + +P  VR LF  +S++  +TP EGA+  V+LA+S  VEG  G ++       L  +  +E    K WD+ EV
Sbjct:   22 RRFVGSSVQRLHQGGDSGLMRGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRERAEEAAGQLRREVCPTGGPDSGPTSGGAGELVVRELDLSSLSSVRSFCQEMLQE--------------------EPRLDVLINNAGVFQCPYMKTEDGF--------------------EMQFGVNHLGHFLLTNLLLGLLKSSA-----PSRIVVVSSKLYK----YGDINFEDLN--------------------SEQSYNKSFCYSRSKLANILFTRELARRLEGTS--------------------------------VTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPEEGAQTAVYLASSPEVEGVSGKYFGDCKEEELLPKAMDESVARKLWDISEV 330          
BLAST of EWM27409.1 vs. NCBI_GenBank
Match: gi|803232632|ref|XP_011976480.1| (PREDICTED: retinol dehydrogenase 14 [Ovis aries musimon])

HSP 1 Score: 125.561 bits (314), Expect = 1.474e-28
Identity = 132/410 (32.20%), Postives = 171/410 (41.71%), Query Frame = 0
Query:   26 RRLCPSQEERDFYAMD-GSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSP--WGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGAL-FPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSL-LPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWA------LEARKKEEERREKGWDVVEV 424
            RR   S  +R     D G M G+TVL+TGANSG+GRA A  L R GA V+  CRD  +AE  A  + R +  T  P S P   G        LDL+SL+SVR+F     +E                    EPRL VL+NNAG    P  +  D +                    E     NHLG FLLT LLL  LK +      PSR+V+VSS+L K    Y D    D                      +   Y     Y  SKLAN+L    L R+ +G S                                V+V    PG+V T L R + +P  VR LF  +S++  +TP EGA+  V+LA+S  VEG  G ++       L  +  +E    K WD+ EV
Sbjct:   22 RRFVGSSVQRLHQGGDSGLMRGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRERAEEAAGQLRREVWPTGGPDSGPTSGGAGELVVKELDLSSLSSVRSFCQEMLQE--------------------EPRLDVLINNAGVFQCPYMKTEDGF--------------------EMQFGVNHLGHFLLTNLLLGLLKSSA-----PSRIVVVSSKLYK----YGDINFEDLN--------------------SEQSYNKSFCYSRSKLANILFTRELARRLEGTS--------------------------------VTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPEEGAQTAVYLASSPEVEGVSGKYFGDCKEEELLPKAMDESVARKLWDISEV 330          
BLAST of EWM27409.1 vs. NCBI_GenBank
Match: gi|1062991252|ref|XP_017911096.1| (PREDICTED: retinol dehydrogenase 14 [Capra hircus])

HSP 1 Score: 125.561 bits (314), Expect = 1.564e-28
Identity = 133/410 (32.44%), Postives = 174/410 (42.44%), Query Frame = 0
Query:   26 RRLCPSQEERDFYAMD-GSMAGRTVLVTGANSGVGRAAAEILARKGAHVMCACRDMPKAEATASAINRRLPRTVPPSSSP--WGRASPAPAPLDLASLASVRAFVDAFERERGEEGEEEQKRNEDRRLRRREPRLHVLVNNAGAL-FPKRELVDVWKREEQEGRGEGEGKRESLLVERTMATNHLGPFLLTALLLPTLKETGRAEGRPSRVVMVSSRLEKGKGEYLDCWVRDPTLTPAEDQDPKEEGEEEGGPVASPPYRPFLAYGASKLANLLAVTYLHRQQQGWSLPDATHQPPTTTTPPSLLLGPSTHRWDPSDQHVSVYGCTPGMVHTALNRSL-LPGFVRVLFWPLSYSLLQTPFEGARPVVFLAASDRVEGRGGGFWA------LEARKKEEERREKGWDVVEV 424
            RR   S  +R     D G M G+TVL+TGANSG+GRA A  L R GA V+  CRD  +AE  A  + R +  T  P S P   G        LDL+SL+SVR+F     +E                    EPRL VL+NNAG    P  +  D +                    E     NHLG FLLT LLL  LK +      PSR+V+VSS+L K    Y D           ED + ++             Y     Y  SKLAN+L    L R+ +G S                                V+V    PG+V T L R + +P  VR LF  +S++  +TP EGA+  V+LA+S  VEG  G ++       L  +  +E    K WD+ EV
Sbjct:   22 RRFVGSSVQRLHQGGDSGLMRGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRKRAEEAAGQLRREVWPTGGPDSGPTSGGAGELVVKELDLSSLSSVRSFCQEMLQE--------------------EPRLDVLINNAGVFQCPYMKTEDGF--------------------EMQFGVNHLGHFLLTNLLLGLLKSSA-----PSRIVVVSSKLYK----YGD--------INFEDLNSEQS------------YNKSFCYSRSKLANILFTRELARRLEGTS--------------------------------VTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPEEGAQTAVYLASSPEVEGVSGKYFGDCKEEELLPKAMDESVARKLWDISEV 330          
The following BLAST results are available for this feature:
BLAST of EWM27409.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109642|gb|EWM27409.1|0.000e+0100.00retinol dehydrogenase 14 [Nannochloropsis gaditana... [more]
gi|553183784|ref|XP_005853966.1|0.000e+099.77retinol dehydrogenase 14 [Nannochloropsis gaditana... [more]
gi|594060548|ref|XP_006054376.1|1.070e-2932.44PREDICTED: retinol dehydrogenase 14 [Bubalus bubal... [more]
gi|1123919855|ref|XP_019610050.1|2.818e-2931.79PREDICTED: LOW QUALITY PROTEIN: retinol dehydrogen... [more]
gi|507629816|ref|XP_004627541.1|3.879e-2931.97PREDICTED: retinol dehydrogenase 14 [Octodon degus... [more]
gi|311253084|ref|XP_003125388.1|7.124e-2932.49retinol dehydrogenase 14 [Sus scrofa][more]
gi|260810577|ref|XP_002600037.1|1.122e-2828.14hypothetical protein BRAFLDRAFT_221193 [Branchiost... [more]
gi|556756655|ref|XP_005973677.1|1.196e-2832.20PREDICTED: retinol dehydrogenase 14 [Pantholops ho... [more]
gi|803232632|ref|XP_011976480.1|1.474e-2832.20PREDICTED: retinol dehydrogenase 14 [Ovis aries mu... [more]
gi|1062991252|ref|XP_017911096.1|1.564e-2832.44PREDICTED: retinol dehydrogenase 14 [Capra hircus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3273rna3273Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications