|
|
Properties
| Property Name | Value |
|---|
| Product | sulfite reductase |
| Orig transcript id | gnl|cribi|Naga_101580g1.3608.mrna |
| Orig protein id | gnl|cribi|Naga_101580g1.3608 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1139408..1141611 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3259 ID=rna3259|Name=rna3259|organism=Nannochloropsis gaditana|type=mRNA|length=705bp
ATGCTACGTCATGCCGTTGTCCGTTTTCCAGCTGCGTTTAAGCGGATCAA
CGTAATCCGTGGAGGGTGTCTGGCCCAATGCAGCCCTTGCAGGAGCTTGG
AGATCCACCGGCATTCGCACGCCCGAGTCATGACAAGTGCAGCAGCTGCG
CTTTCCTCTTCCTTCCAGGATAAACGGGATACTGGCAACACGAGGGCAGT
GGTGCTGCTAGCTTTGTCGTTAATTGCCGGTGTGGGGGGGATAAGAACAG
CGTCCCCCGCCCAGACCGAAGCGGGCGCAACGGACGCAGGCGTGAAAGAG
ATAGAGTACACCAAGGCAGACGTCAAAGCACACAAGACGATCGAAACAGG
CGTATGGGTCACTTACAAAGACGGCGTGTACGACATCACAAAATTTGCGG
AGAACCATCCCGGAGGAAACAAGATTCTCATGGCAGCCGGGGGCCCGGTT
GAACCCTATTGGAATTTGTATGCCGTCCACAAAGATCCTGAGGTGCAGGA
AACCATCAAAGAGATCCTGGGGGAGCTCCGAATCGGAACCTTGAAGCACA
GCCCGGAGGACGAGAAGGAAGTGGATTTGGACGACCCTTATGCCCACGAG
CCAGAGAGGCACCCCGCTTTCAAAATAAACACACTGAAGCCCTTCAATGC
TGAGCCCCCTGGCGCTCTTCTGGTGGATAGAAGAGGACTACTTGCTCGAG
GTTAA back to topprotein sequence of rna3259 >rna3259-protein ID=rna3259-protein|Name=rna3259|organism=Nannochloropsis gaditana|type=polypeptide|length=204bp
MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYK
NFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYA
YSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDYSRSWTWALWEHFVP
EEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVALR
KVAA back to topmRNA from alignment at CM002460.1:1139408..1141611+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3259 ID=rna3259|Name=rna3259|organism=Nannochloropsis gaditana|type=mRNA|length=2204bp|location=Sequence derived from alignment at CM002460.1:1139408..1141611+ (Nannochloropsis gaditana)
TTTCCTGGACGGGATTTGCCATCTCCAACGCTGAATGGACCGGAGTGAAG
CTCCGAGACGTCCTCCTCTGGGCAGGTGACCCgaacccccctccctccct
ccctccctccctccctcctctttatTTCCACTTTCCCCATTCCTCGATGC
TTTGCTTCCTCAGCTGGAGCATTGGCGACAGTATTACAATTTGTTGTCGT
CCCAAGCGCCCATAAACGAACCTCGTCTCgtgtcccccctccctccctcc
ctccctccctcccacccaccctccctcctcaggcgTGCCCGAGGAGTATG
AGCGGCTGGGCCTGGCCCACGTCCACTTCATTGGGCTCGACAAGGACATC
TCGAACCAGACCTACgaggcctccatccccatcaaCAAAGCCGTCGACCC
GCGTGGAGACGTCCTGCTCGCCTTCGCCATGAACGGAGAGCCCATCCCTC
GGTGAGCtgcccggggagggaagggggttcGAGTCGGGGTCAGGGCTCGA
GTCTTTGGAGGCGCGGTGTCGTCTGCGTGGatcttgaagaggagggttgg
GGTGAGGGTTGACAGGCTTTGGGTCGCTGGTTTAATTCGCCGGTTGAGGG
TCTCCTTTGCCGCCTCCGGGAATCCGGACGGTCCTCCGTGTCGAGGTGGG
GCGTGagcgtcgaggaggagggcgaggaggaggacaagggccgaggagga
gagggggacagTTCGGGCGGGCTCAAACTTTGAATCGCTCGGTCACTACT
TTGTCCTCCCtaaacctccttcccttcctctccctgatacccccctcctc
ccctgtaTCCTCCCCTGGCCGTGCAGTGATCATGGATACCCCGTTCGCGC
CGTCGTCCCCGGCATTGTGGGGGCTCGAAACGTGAAATGGGtcgggaagg
tggtggccagCAAGAGGTAcgctctcccctcgctccccccctccctccct
cccttcctccccttgctctgcTCTTTCTCCCGTTCTCCTGGTCCCGTCTT
TGTCTCCTTGACATCCGTTGACATTACTTTATATGGCAGCCCTCCATTAT
GGGCCGTCTGAGAATGTTTCCCGCAGAAGACTGAAaaattcccttccttt
cttgctctctcccctcctcttcctcccctccttttccgcgTCTGGCAGTG
AGTCTCAAGGATTTTGGCAGCAGCGCGACTACAAGAACTTCAGTCCCTCA
ACGGACTGGGATAATGTAGACTTCGACTCGGCGCCCGCCATCcaggtggg
agaggtggaaaTAAGGAAAATGGGCATGAGAAAAcgccgagagggagaaa
gtgatgGAGGATCGACGTACTGTGGCGATACTGCGCTAGCCCGTGGTCGT
GTGGCAAGCCTCTGCCTTCCGGAACCCCGCTTGACTCTATGCACCCCTCT
ACATTTCTCTGTATGGCAGGACATGCCTATCCAAAGCGCCATCGCTACTG
TGGAGggcggcttggagggagaagaggagggcggccccCTGACTATCAAG
GGCTACGCTtacagtggaggagggcggggggtcgCGCGCGTGGACGTGTC
GatcgacggagggaagacTTGGGAGCCTGCCACCatcaaagaaggaggat
ggaagcaTGGTAAGTCAGAGAGAGATTGCTTGAGtttggaatggaaggag
caggagtgCGTCGAGTGCCCGATGGGGCcaccttttttcctcctttggcG
GAATTCCCACTTGCGATTCAGTTCTCGCATTGATTGATTCACTCTGGGCT
ATGCTCTCGACGAAATTCTTGTTGAATGGTGTAGTGTGCCTTTATATGTT
GAATGATGTAGTGTGCCTTGATATTGTGGCCTGAGAAATTGTTTACTTCA
ATGTCTCTTCTATTGTGCGACCAGGTGACTACTCGCGTTCCTGGACATGG
GCACTCTGGGAGCATTTCGTGCCCGAAGAGAAACTTGAAGGCCTCACCGA
AGCGGACATTTGCGTCAAGGCGACTGACACCTCGTACAACGTGCAACCCG
AGAGCATCGAAGCGTACTGGAATCTGCGGGGTGTGCTGGCTAACTGCTGG
GCGCGACAGAAAGTGGCCCTTCGGAAGGTAGCTGCCTAGAGaatagaggg
gggaaagaagtggTATTATATGATCGGAAAGGGTGAAAGTAGGTTAGACA
AAAAAACTTGACAGATGCTAAGCAATACGTGTTCTGAGTTTTTCATTCGC
AACA back to topCoding sequence (CDS) from alignment at CM002460.1:1139408..1141611+ >rna3259 ID=rna3259|Name=rna3259|organism=Nannochloropsis gaditana|type=CDS|length=3075bp|location=Sequence derived from alignment at CM002460.1:1139408..1141611+ (Nannochloropsis gaditana)
ATGAACGGAGAGCCCATCCCTCGTGATCATGGATACCCCGTTCGCGCCGT
CGTCCCCGGCATTGTGGGGGCTCGAAACGTGAAATGGGtcgggaaggtgg
tggccagCAAGAGTGAGTCTCAAGGATTTTGGCAGCAGCGCGACTACAAG
AACTTCAGTCCCTCAACGGACTGGGATAATGTAGACTTCGACTCGGCGCC
CGCCATCcagGACATGCCTATCCAAAGCGCCATCGCTACTGTGGAGggcg
gcttggagggagaagaggagggcggccccCTGACTATCAAGGGCTACGCT
tacagtggaggagggcggggggtcgCGCGCGTGGACGTGTCGatcgacgg
agggaagacTTGGGAGCCTGCCACCatcaaagaaggaggatggaagcaTG
GTGACTACTCGCGTTCCTGGACATGGGCACTCTGGGAGCATTTCGTGCCC
GAAGAGAAACTTGAAGGCCTCACCGAAGCGGACATTTGCGTCAAGGCGAC
TGACACCTCGTACAACGTGCAACCCGAGAGCATCGAAGCGTACTGGAATC
TGCGGGGTGTGCTGGCTAACTGCTGGGCGCGACAGAAAGTGGCCCTTCGG
AAGGTAGCTGCCTAGATGAACGGAGAGCCCATCCCTCGTGATCATGGATA
CCCCGTTCGCGCCGTCGTCCCCGGCATTGTGGGGGCTCGAAACGTGAAAT
GGGtcgggaaggtggtggccagCAAGAGTGAGTCTCAAGGATTTTGGCAG
CAGCGCGACTACAAGAACTTCAGTCCCTCAACGGACTGGGATAATGTAGA
CTTCGACTCGGCGCCCGCCATCcagGACATGCCTATCCAAAGCGCCATCG
CTACTGTGGAGggcggcttggagggagaagaggagggcggccccCTGACT
ATCAAGGGCTACGCTtacagtggaggagggcggggggtcgCGCGCGTGGA
CGTGTCGatcgacggagggaagacTTGGGAGCCTGCCACCatcaaagaag
gaggatggaagcaTGGTGACTACTCGCGTTCCTGGACATGGGCACTCTGG
GAGCATTTCGTGCCCGAAGAGAAACTTGAAGGCCTCACCGAAGCGGACAT
TTGCGTCAAGGCGACTGACACCTCGTACAACGTGCAACCCGAGAGCATCG
AAGCGTACTGGAATCTGCGGGGTGTGCTGGCTAACTGCTGGGCGCGACAG
AAAGTGGCCCTTCGGAAGGTAGCTGCCTAGATGAACGGAGAGCCCATCCC
TCGTGATCATGGATACCCCGTTCGCGCCGTCGTCCCCGGCATTGTGGGGG
CTCGAAACGTGAAATGGGtcgggaaggtggtggccagCAAGAGTGAGTCT
CAAGGATTTTGGCAGCAGCGCGACTACAAGAACTTCAGTCCCTCAACGGA
CTGGGATAATGTAGACTTCGACTCGGCGCCCGCCATCcagGACATGCCTA
TCCAAAGCGCCATCGCTACTGTGGAGggcggcttggagggagaagaggag
ggcggccccCTGACTATCAAGGGCTACGCTtacagtggaggagggcgggg
ggtcgCGCGCGTGGACGTGTCGatcgacggagggaagacTTGGGAGCCTG
CCACCatcaaagaaggaggatggaagcaTGGTGACTACTCGCGTTCCTGG
ACATGGGCACTCTGGGAGCATTTCGTGCCCGAAGAGAAACTTGAAGGCCT
CACCGAAGCGGACATTTGCGTCAAGGCGACTGACACCTCGTACAACGTGC
AACCCGAGAGCATCGAAGCGTACTGGAATCTGCGGGGTGTGCTGGCTAAC
TGCTGGGCGCGACAGAAAGTGGCCCTTCGGAAGGTAGCTGCCTAGATGAA
CGGAGAGCCCATCCCTCGTGATCATGGATACCCCGTTCGCGCCGTCGTCC
CCGGCATTGTGGGGGCTCGAAACGTGAAATGGGtcgggaaggtggtggcc
agCAAGAGTGAGTCTCAAGGATTTTGGCAGCAGCGCGACTACAAGAACTT
CAGTCCCTCAACGGACTGGGATAATGTAGACTTCGACTCGGCGCCCGCCA
TCcagGACATGCCTATCCAAAGCGCCATCGCTACTGTGGAGggcggcttg
gagggagaagaggagggcggccccCTGACTATCAAGGGCTACGCTtacag
tggaggagggcggggggtcgCGCGCGTGGACGTGTCGatcgacggaggga
agacTTGGGAGCCTGCCACCatcaaagaaggaggatggaagcaTGGTGAC
TACTCGCGTTCCTGGACATGGGCACTCTGGGAGCATTTCGTGCCCGAAGA
GAAACTTGAAGGCCTCACCGAAGCGGACATTTGCGTCAAGGCGACTGACA
CCTCGTACAACGTGCAACCCGAGAGCATCGAAGCGTACTGGAATCTGCGG
GGTGTGCTGGCTAACTGCTGGGCGCGACAGAAAGTGGCCCTTCGGAAGGT
AGCTGCCTAGATGAACGGAGAGCCCATCCCTCGTGATCATGGATACCCCG
TTCGCGCCGTCGTCCCCGGCATTGTGGGGGCTCGAAACGTGAAATGGGtc
gggaaggtggtggccagCAAGAGTGAGTCTCAAGGATTTTGGCAGCAGCG
CGACTACAAGAACTTCAGTCCCTCAACGGACTGGGATAATGTAGACTTCG
ACTCGGCGCCCGCCATCcagGACATGCCTATCCAAAGCGCCATCGCTACT
GTGGAGggcggcttggagggagaagaggagggcggccccCTGACTATCAA
GGGCTACGCTtacagtggaggagggcggggggtcgCGCGCGTGGACGTGT
CGatcgacggagggaagacTTGGGAGCCTGCCACCatcaaagaaggagga
tggaagcaTGGTGACTACTCGCGTTCCTGGACATGGGCACTCTGGGAGCA
TTTCGTGCCCGAAGAGAAACTTGAAGGCCTCACCGAAGCGGACATTTGCG
TCAAGGCGACTGACACCTCGTACAACGTGCAACCCGAGAGCATCGAAGCG
TACTGGAATCTGCGGGGTGTGCTGGCTAACTGCTGGGCGCGACAGAAAGT
GGCCCTTCGGAAGGTAGCTGCCTAG back to top
|