EWM27423.1, cds3250 (CDS) Nannochloropsis gaditana

Overview
NameEWM27423.1
Unique Namecds3250
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1139836..1139858 +
Alignment locationCM002460.1:1140234..1140323 +
Alignment locationCM002460.1:1140556..1140652 +
Alignment locationCM002460.1:1140827..1141016 +
Alignment locationCM002460.1:1141282..1141496 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27423.1
Productsulfite reductase
Orig transcript idgnl|cribi|Naga_101580g1.3608.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1139836..1139858 +
CM002460.1supercontigCM002460.1:1140234..1140323 +
CM002460.1supercontigCM002460.1:1140556..1140652 +
CM002460.1supercontigCM002460.1:1140827..1141016 +
CM002460.1supercontigCM002460.1:1141282..1141496 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
GO:0042128nitrate assimilation
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0030151molybdenum ion binding
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR014756Ig_E-set
IPR005066MoCF_OxRdtse_dimer
IPR000572OxRdtase_Mopterin-bd_dom
IPR008335Mopterin_OxRdtase_euk
Homology
BLAST of EWM27423.1 vs. NCBI_GenBank
Match: gi|585109659|gb|EWM27423.1| (sulfite reductase [Nannochloropsis gaditana])

HSP 1 Score: 417.542 bits (1072), Expect = 1.127e-147
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
Query:    1 MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDYSRSWTWALWEHFVPEEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVALRKVAA 204
            MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDYSRSWTWALWEHFVPEEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVALRKVAA
Sbjct:    1 MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDYSRSWTWALWEHFVPEEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVALRKVAA 204          
BLAST of EWM27423.1 vs. NCBI_GenBank
Match: gi|1005482309|ref|XP_015777843.1| (PREDICTED: LOW QUALITY PROTEIN: sulfite oxidase-like [Acropora digitifera])

HSP 1 Score: 230.335 bits (586), Expect = 6.629e-70
Identity = 112/201 (55.72%), Postives = 137/201 (68.16%), Query Frame = 0
Query:    1 MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDYSRSWTWALWEHFVPEEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVALRK 201
            MNG PIPRDHG+PVR V PG+VGARNVKW+ K+VASK ES   WQ+ DYK FSPS DWD VDF SAPAIQD+P+ SAI     G     E   +T+KGYA+SGGG+G+ RVDVS+DGGKTW  A +K         +R+W W LW   +P  K  G     ICVKA D++YN QP+S+   WNLRGVL+N W R  V +++
Sbjct:  316 MNGVPIPRDHGFPVRLVAPGVVGARNVKWLNKIVASKEESCSHWQRNDYKGFSPSVDWDTVDFKSAPAIQDLPVTSAICEPAEGAVISAEDEEITLKGYAWSGGGKGIVRVDVSLDGGKTWHVADLK----GENKLNRAWAWKLWHATLPLPK--GADSLQICVKAVDSTYNTQPDSVAPIWNLRGVLSNAWHRVNVKVKR 510          
BLAST of EWM27423.1 vs. NCBI_GenBank
Match: gi|557006476|ref|XP_006004738.1| (PREDICTED: sulfite oxidase, mitochondrial [Latimeria chalumnae] >gi|557006479|ref|XP_006004739.1| PREDICTED: sulfite oxidase, mitochondrial [Latimeria chalumnae])

HSP 1 Score: 229.95 bits (585), Expect = 4.046e-69
Identity = 113/201 (56.22%), Postives = 142/201 (70.65%), Query Frame = 0
Query:    1 MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDYSRSWTWALWEHFVPEEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVALRK 201
            MNGE +PRDHG+PVR +VPG+VGARNVKW+GK++ SK ES+  WQQ DYK FSPS DW+NVDF SAPAIQ++PIQSAI   + G         +T+KGYA+SGGG  V RVDVS+DGGKTW+ A++     K G   R+W W LW+   P  K  G  + +I  KA D+SYNVQP+++   WNLRGVL+N W R  V+L K
Sbjct:  379 MNGEDLPRDHGFPVRVIVPGVVGARNVKWLGKIILSKEESKSHWQQNDYKGFSPSVDWNNVDFKSAPAIQELPIQSAITEPKDGDHIPLGSKEITVKGYAWSGGGHEVVRVDVSLDGGKTWQTASLIGQEQKPG---RAWAWKLWKLTAPLPK--GTEQLEIICKAVDSSYNVQPDTVAPIWNLRGVLSNAWHRVNVSLEK 574          
BLAST of EWM27423.1 vs. NCBI_GenBank
Match: gi|972964471|ref|XP_015199561.1| (PREDICTED: sulfite oxidase, mitochondrial [Lepisosteus oculatus])

HSP 1 Score: 227.639 bits (579), Expect = 8.976e-69
Identity = 113/200 (56.50%), Postives = 141/200 (70.50%), Query Frame = 0
Query:    1 MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIK---EGGWKHGDYSRSWTWALWEHFVPEEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKV 197
            MNGE +P DHGYP+R VVPG+VGARNVKW+GK+V S+ ESQ  WQQ DYK FSP TDWD VDF +APAIQ++P+QSAI   + G+      G +T++GYA+SGGGR V RVDVS+DGG+TW  A ++   EGG      +RSW W LWE   P     G  E +I  KA D+SYNVQP+++   WNLRGVL+N W R +V
Sbjct:  311 MNGEDLPADHGYPLRVVVPGVVGARNVKWLGKIVVSEEESQSHWQQNDYKGFSPGTDWDTVDFKTAPAIQELPVQSAITVPQEGVVLGAGQGTVTVQGYAWSGGGREVVRVDVSLDGGRTWNVARLQHGEEGGAAPAPPNRSWAWTLWELRAPLPP--GARELEIVCKAVDSSYNVQPDTVAPIWNLRGVLSNAWHRVRV 508          
BLAST of EWM27423.1 vs. NCBI_GenBank
Match: gi|1109000437|ref|XP_019131453.1| (PREDICTED: sulfite oxidase [Larimichthys crocea] >gi|808863811|gb|KKF15054.1| Sulfite oxidase, mitochondrial [Larimichthys crocea])

HSP 1 Score: 226.483 bits (576), Expect = 7.407e-68
Identity = 113/206 (54.85%), Postives = 137/206 (66.50%), Query Frame = 0
Query:    1 MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDY-----SRSWTWALWEHFVPEEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVALRK 201
            MNGE +P DHGYPVR VVPG VGARNVKW+GK++ S  ES   WQQ DYK FSP+TDWD VDF SAPAIQ++PIQSAI     G   +  G  +T+KGYA+SGGGR V RVDVS+DGGKTW+ A ++               R+W W LWE  VP        E +I  KA D SYN+QP+++   WNLRGVL+N W R KV +R+
Sbjct:  362 MNGEDLPADHGYPVRVVVPGTVGARNVKWLGKIIVSAEESSSHWQQNDYKGFSPATDWDTVDFKSAPAIQELPIQSAITVPADGTAVDRSGEEVTVKGYAWSGGGREVVRVDVSLDGGKTWQVAQLRSSDKDQAPEVSPPPGRAWAWKLWEITVPLPA--EAQELEIVCKAVDNSYNMQPDTVAPIWNLRGVLSNAWHRVKVKIRE 565          
BLAST of EWM27423.1 vs. NCBI_GenBank
Match: gi|1042317516|ref|XP_017306201.1| (PREDICTED: sulfite oxidase, mitochondrial [Ictalurus punctatus] >gi|1042317518|ref|XP_017306202.1| PREDICTED: sulfite oxidase, mitochondrial [Ictalurus punctatus])

HSP 1 Score: 226.098 bits (575), Expect = 1.147e-67
Identity = 109/205 (53.17%), Postives = 140/205 (68.29%), Query Frame = 0
Query:    1 MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATI-----KEGGWKHGDYSRSWTWALWEHFVPEEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVALR 200
            MNGE +P DHG+PVR +VPG+VGARNVKW+GK++ S+ ESQ  WQQ DYK FSP TDWD VDF SAP+IQ++PIQSAI  +  G   + +   LT+KGY +SGGGR V RVDVS+DGGKTW  A +     +E         R+W W  WE  +P    EG+ E ++  KA D+SYN QP+S+   WNLRGVL+N W R +V ++
Sbjct:  365 MNGEDLPADHGFPVRVIVPGVVGARNVKWLGKIIISEEESQSHWQQNDYKGFSPGTDWDTVDFKSAPSIQELPIQSAITNLTDGSSVDRDMENLTVKGYTWSGGGREVVRVDVSLDGGKTWHVAKLQNSEEREISAPSPPPGRAWAWKFWEITIPLP--EGVQELEVVCKAVDSSYNTQPDSMPPIWNLRGVLSNAWHRVRVKVK 567          
BLAST of EWM27423.1 vs. NCBI_GenBank
Match: gi|1109002439|ref|XP_019132219.1| (PREDICTED: sulfite oxidase-like [Larimichthys crocea] >gi|808862902|gb|KKF14343.1| Sulfite oxidase, mitochondrial [Larimichthys crocea])

HSP 1 Score: 224.942 bits (572), Expect = 3.393e-67
Identity = 112/206 (54.37%), Postives = 136/206 (66.02%), Query Frame = 0
Query:    1 MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDY-----SRSWTWALWEHFVPEEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVALRK 201
            MNGE +P DHGYPVR VVPG VGARNVKW+GK++ S  ES   WQQ DYK FSP+TDWD VDF SAPAIQ++PIQSAI     G   +  G  +T+KGYA+SGGGR V RVDVS+DGGKTW+ A ++               R+W W LWE   P        E +I  KA D SYN+QP+++   WNLRGVL+N W R KV +R+
Sbjct:  362 MNGEDLPADHGYPVRVVVPGTVGARNVKWLGKIIVSAEESSSHWQQNDYKGFSPATDWDTVDFKSAPAIQELPIQSAITVPADGTAVDRSGEEVTVKGYAWSGGGREVVRVDVSLDGGKTWQVAQLRSSDKDQAPEVSPPPGRAWAWKLWEITAPLPA--EAQELEIVCKAVDNSYNMQPDTVAPIWNLRGVLSNAWHRVKVKIRE 565          
BLAST of EWM27423.1 vs. NCBI_GenBank
Match: gi|1137530324|ref|XP_019911222.1| (PREDICTED: sulfite oxidase, mitochondrial [Esox lucius])

HSP 1 Score: 225.713 bits (574), Expect = 3.734e-67
Identity = 111/201 (55.22%), Postives = 138/201 (68.66%), Query Frame = 0
Query:    1 MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDYSRSWTWALWEHFVPEEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVALRK 201
            MNGE +P DHGYPVR VVPG VGARNVKW+GK++ S+ ES   WQQ DYK FSP+TDWD VDF SAPAIQ++PIQSAI     G   +     +T+KGYA+SGGGR V RVDVS+DGG+TW+ A ++ G  +     R+W W LWE   P        E +I  KA D SYN+QP+++   WNLRGVL+N W R KV +R+
Sbjct:  412 MNGEDLPADHGYPVRVVVPGTVGARNVKWLGKIIVSEEESSSHWQQNDYKGFSPATDWDTVDFKSAPAIQELPIQSAITQPAEGATLDRRAEEVTVKGYAWSGGGREVVRVDVSLDGGQTWKVAQLQGG--EKPQPGRAWAWKLWELTAPLPP--ATQELEIVCKAVDNSYNMQPDTVAPIWNLRGVLSNAWHRVKVTIRE 608          
BLAST of EWM27423.1 vs. NCBI_GenBank
Match: gi|1083360973|ref|XP_018580721.1| (PREDICTED: sulfite oxidase, mitochondrial [Scleropages formosus])

HSP 1 Score: 225.713 bits (574), Expect = 3.882e-67
Identity = 119/209 (56.94%), Postives = 141/209 (67.46%), Query Frame = 0
Query:    1 MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDYS-------RSWTWALWEHFVPEEKLEGLT-EADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVALRK 201
            MN E +PRDHGYPVR VVPG VGARNVKW+ K+V S+ E+   WQQ DYK FSP TDWD VD+ SAPAIQ++P+QSAI     G       G LT+KGYA+SGGGR V RVDVS+DGGKTW  AT+  GG + G  +       R+W W LWE  VP   L   T E +I  KA D SYNVQP+++   WNLRGVL+N W R KV +RK
Sbjct:  410 MNEEELPRDHGYPVRVVVPGTVGARNVKWLAKIVVSEEETPSHWQQNDYKGFSPGTDWDTVDYKSAPAIQELPVQSAITQPAEGSTVSCSKGELTVKGYAWSGGGREVIRVDVSLDGGKTWNVATL--GGAEEGQEAATSPPPGRAWAWKLWELTVP---LPAETQELEIVCKAVDNSYNVQPDTMAPVWNLRGVLSNAWHRVKVTVRK 613          
BLAST of EWM27423.1 vs. NCBI_GenBank
Match: gi|641781942|ref|XP_008173492.1| (PREDICTED: sulfite oxidase, mitochondrial [Chrysemys picta bellii])

HSP 1 Score: 224.172 bits (570), Expect = 4.109e-67
Identity = 114/199 (57.29%), Postives = 136/199 (68.34%), Query Frame = 0
Query:    1 MNGEPIPRDHGYPVRAVVPGIVGARNVKWVGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEEEGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDYSRSWTWALWEHFVPEEKLEGLTEADICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVAL 199
            MNGE +PRDHGYP+R VVPG+VGARNVKW+G+V  S  ES   WQQ DYK FSP+ DWD VDF +APAIQ++P+QSAI     G       G LT+KGYA+SGGGRGV RVDVS+DGG+TW  A +     + G   R+W W LW+   P     G TE DI  KA D SYNVQP+++E  WNLRGVL+N W R  V L
Sbjct:  354 MNGEELPRDHGYPLRVVVPGVVGARNVKWLGRVSVSPEESPSHWQQNDYKGFSPAVDWDTVDFTTAPAIQELPVQSAITDPAPG--ATVPPGELTVKGYAWSGGGRGVVRVDVSLDGGRTWRVAELTGEEQQPG---RAWAWRLWQLTAPVPP--GATELDIVCKAVDASYNVQPDTVEPIWNLRGVLSNAWHRVTVTL 545          
The following BLAST results are available for this feature:
BLAST of EWM27423.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109659|gb|EWM27423.1|1.127e-147100.00sulfite reductase [Nannochloropsis gaditana][more]
gi|1005482309|ref|XP_015777843.1|6.629e-7055.72PREDICTED: LOW QUALITY PROTEIN: sulfite oxidase-li... [more]
gi|557006476|ref|XP_006004738.1|4.046e-6956.22PREDICTED: sulfite oxidase, mitochondrial [Latimer... [more]
gi|972964471|ref|XP_015199561.1|8.976e-6956.50PREDICTED: sulfite oxidase, mitochondrial [Lepisos... [more]
gi|1109000437|ref|XP_019131453.1|7.407e-6854.85PREDICTED: sulfite oxidase [Larimichthys crocea] >... [more]
gi|1042317516|ref|XP_017306201.1|1.147e-6753.17PREDICTED: sulfite oxidase, mitochondrial [Ictalur... [more]
gi|1109002439|ref|XP_019132219.1|3.393e-6754.37PREDICTED: sulfite oxidase-like [Larimichthys croc... [more]
gi|1137530324|ref|XP_019911222.1|3.734e-6755.22PREDICTED: sulfite oxidase, mitochondrial [Esox lu... [more]
gi|1083360973|ref|XP_018580721.1|3.882e-6756.94PREDICTED: sulfite oxidase, mitochondrial [Sclerop... [more]
gi|641781942|ref|XP_008173492.1|4.109e-6757.29PREDICTED: sulfite oxidase, mitochondrial [Chrysem... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3259rna3259Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications