EWM27437.1, cds3238 (CDS) Nannochloropsis gaditana

Overview
NameEWM27437.1
Unique Namecds3238
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1114561..1115628 -

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Properties
Property NameValue
Protein idEWM27437.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100482g2.2387.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1114561..1115628 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM27437.1 vs. NCBI_GenBank
Match: gi|585109685|gb|EWM27437.1| (hypothetical protein Naga_100482g2 [Nannochloropsis gaditana])

HSP 1 Score: 721.465 bits (1861), Expect = 0.000e+0
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0
Query:    1 MDLEPNSPQVFVNDCNNEEESPPFSPLDSLPQVPSPLPSPASPVMASHILKSVRLEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSKGELVPWEG 355
            MDLEPNSPQVFVNDCNNEEESPPFSPLDSLPQVPSPLPSPASPVMASHILKSVRLEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSKGELVPWEG
Sbjct:    1 MDLEPNSPQVFVNDCNNEEESPPFSPLDSLPQVPSPLPSPASPVMASHILKSVRLEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSKGELVPWEG 355          
BLAST of EWM27437.1 vs. NCBI_GenBank
Match: gi|553187299|ref|XP_005854579.1| (rna (guanine-9-)-methyltransferase domain-containing protein 2 [Nannochloropsis gaditana CCMP526] >gi|422294479|gb|EKU21779.1| rna (guanine-9-)-methyltransferase domain-containing protein 2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 698.738 bits (1802), Expect = 0.000e+0
Identity = 345/351 (98.29%), Postives = 346/351 (98.58%), Query Frame = 0
Query:    1 MDLEPNSPQVFVNDCNNEEESPPFSPLDSLPQVPSPLPSPASPVMASHILKSVR----LEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSK 347
            MDLEPNSPQVFVNDCNNEEESPPF PLDSLPQVPSPLPSPASPVMASHILKSVR    LEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTA+VLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSK
Sbjct:    7 MDLEPNSPQVFVNDCNNEEESPPFPPLDSLPQVPSPLPSPASPVMASHILKSVRPKNPLEKLVLLPSVVMISWAAWHSSSSFFPSYGALPLLLFLVTTIYLLSVSRFASSFNLFSAPLSQRLTKADKKAIKYANAKKRLKHTRQKYHRKKSQIYKELTEEERAIVKAGIVAREEERAARFAAVLAVDAPWLRAREKGSSPRQGGSLPFPKNPAMGSPWEADQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTADVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSK 357          
BLAST of EWM27437.1 vs. NCBI_GenBank
Match: gi|1032154414|gb|OAO17656.1| (tRNA m(1)G methyltransferase [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 64.3142 bits (155), Expect = 6.014e-8
Identity = 41/131 (31.30%), Postives = 69/131 (52.67%), Query Frame = 0
Query:  218 QNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPI-FHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSK 347
            + E+ ++ +   LAA       ++    R+A+D+HY ++++G+    S+ +Q+G C+ A K A    NT +  HV      T   ++  G   WP+  HA  + +VFPR  IVY +PDA +   A +D SK
Sbjct:   15 KKEQKEKVKMEKLAARKQKLWDAVKTGQRVAIDIHYQDQMNGVE-QYSVVRQLGLCHKANKDA----NTHLSIHVCGATPETTPAIQSFGAAKWPMTFHAEDLKDVFPREDIVYFSPDATEPCGA-IDPSK 139          
BLAST of EWM27437.1 vs. NCBI_GenBank
Match: gi|950897297|ref|XP_014529269.1| (hypothetical protein JH06_4654 [Blastocystis sp. subtype 4] >gi|902863885|gb|KNB45831.1| hypothetical protein JH06_4654 [Blastocystis sp. subtype 4])

HSP 1 Score: 62.7734 bits (151), Expect = 2.480e-7
Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 0
Query:  217 DQNEEADRRQEASLAAPPPSFPPSLPRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASV-VEVFPRPSIVYLTPDADQVLAAPLDLSK 347
            +Q+E+ +R+Q+            +L    RIA+D+HY +++  +  + S+ +Q+G C+ A K A +  +    HV      T   +   G H WP+  H  S+  EVF    +VYL+PDAD+VL   +D SK
Sbjct:   78 EQSEQEERKQQ---------MWDALATGQRIAIDIHYQDQMTSVEQS-SVIRQLGLCHRANKDAKTHVS---LHVCGSTPETNTAMHSFGAHKWPMTFHQESIREEVFSVNELVYLSPDADEVLDT-IDTSK 195          
The following BLAST results are available for this feature:
BLAST of EWM27437.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 4
Match NameE-valueIdentityDescription
gi|585109685|gb|EWM27437.1|0.000e+0100.00hypothetical protein Naga_100482g2 [Nannochloropsi... [more]
gi|553187299|ref|XP_005854579.1|0.000e+098.29rna (guanine-9-)-methyltransferase domain-containi... [more]
gi|1032154414|gb|OAO17656.1|6.014e-831.30tRNA m(1)G methyltransferase [Blastocystis sp. ATC... [more]
gi|950897297|ref|XP_014529269.1|2.480e-731.82hypothetical protein JH06_4654 [Blastocystis sp. s... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3247rna3247Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications