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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100107g9.4511.mrna |
| Orig protein id | gnl|cribi|Naga_100107g9.4511 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1061926..1062861 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3230 ID=rna3230|Name=rna3230|organism=Nannochloropsis gaditana|type=mRNA|length=1363bp
AGCGACGCTCCAGCGAGTTCCACCATCAAATCGCCAGACGCACATTACTG
TCCCGTTGCCCCGAAACGATGCCCTTTACAAATACATTTGTCAAAGTAAA
ATCCCGGTGGCAATGAAAAACCCTTCATGATTCAACGGTTCTTTTTAAAA
ACGCAGCGGTTTACCCATCAAGCTCAGCTATGAGCTCCCTTCCCACTATC
CCCTCTGCGACAAACTTGGTGACTTCAGAGGGGGATGAGAATGAAAATGA
AGAGGAGGGCAACTTATTGGAGGAGCTGTGGCCCCGGGAGACCAAGCCTC
TGCTAAATTATCAAGTTTCATTTTCGAATGGATGTACTGTGAATGTACCA
ATCGTCCAAGACCTTATGGGACGCCGGTATGAAATGGGAATCGGCAACAT
TGTGTGGGACGCTGCCGTCGCAATGCATCATTTTTTCCAAAAGGAATTTC
CTCCTGGACACTTTCAGGGCGCACGCGTTCTGGAGCTCGGAAGCGGCACA
GGCCTCGTTGGGATAACGCTGACTCTTCTCGGCGCTCAGGTGGTCCTAAC
CGATTTGCCCGTCTTCCTCCCCCTCCTTCGAAACAACGTCACCACCTCCC
TCTCTTCCCTTTCCGCCTCCGACACTGCGTGCCTCCCTCATCCCATCCTC
CCTCCTCTCATCGAACCCTTGACCTGGGGCCAGTCCCTCCCTCTAACCTC
CCGTCGACCCTACGACTACGTTATCGGTTCCGACATCACGTACTGCAAAG
AGCACCTGGACGATCTCCTGGCCACGCTGACCGAACCAGTCCCACCCTCC
CTTCCCCCTCTCCCTCCCTCACTGTCTTCCACTGGGGACACCCTGGACCC
CTCCGCTCCTTCCTCATCCTCCTTACCTCCGTGCAAGGGCGTGGTGGGCC
CTGACACGGTGGTATACATCGGCCATTTGGAGCGTGGGGATGAACATGCT
TTCTTCGAGCGCCTTCGCCAGCGAGGGATGGAGGTAGAAGAGGTATGGAA
GGAGGATGTGGGGGAGGGAGGGGTGGCGCGGAAATTGTGGGTGCATGTGT
ATCGATCTTGGAGGAACGCAAATTGAGACAAAAAGATTGCGATCACGTTT
CAGCACCTGGTGTATTGCCAGCTCCACTGTTAGACCACGGCGAGGGCTTA
GACATGTGTATTCATTATTGGCCGGGAGGCATTCCAGGAAAGAGGAACTC
CTCGGAGTCATAGTGAAGGGCCCACAAAGATGGGGACTGTACGAGGATTG
TGCAACTTAGACTGTGAAAGGGTACGAAAGGGTGTGGTACGACGTTTGAA
AAAGTAGCTGGCGAGGAAGGAAAGCACAATAAGAAAGTCCACATTGAAGA
AGCCTAGTTATCC back to topprotein sequence of rna3230 >rna3230-protein ID=rna3230-protein|Name=rna3230|organism=Nannochloropsis gaditana|type=polypeptide|length=127bp
MLCLDVKIKFVPQKVINYFSKFLCGWVIWFLFQEMRRLQTDPVESPTAQL
MRSEPFYANYLVPYCLNLAYTKGWEVPPVPAFEINKDCASAQAWRQEYHE
LLAKNRLLGDEENSGIKESVEEEQAGD back to topmRNA from alignment at CM002460.1:1061926..1062861- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3230 ID=rna3230|Name=rna3230|organism=Nannochloropsis gaditana|type=mRNA|length=936bp|location=Sequence derived from alignment at CM002460.1:1061926..1062861- (Nannochloropsis gaditana)
ATGTTGTGTGTGCACATGTCTTCTCTCCATTGTGACAAAAAAATGATATT
TCCACTTAATCACTTTTCCCCCACTAACACTACTTACATTCCAAGTCCTT
CCCTGCTAGCTCCGAATCCTTTCTCCCACTCATACCAAAATCGATTTGAT
CTACAAGTTGGACGTCAAAATCAAGTTTGTTCCCCAAAAAGTGATCAATT
ATTTCTCGAAATTTTTGTGTGGCTGGGTCATATGGTTTTTATTTCAAGAG
GTACGCGCCGCGCGCCGAAAAAAGGAGGGCAATGCAGTAGGAAAGGGCTT
GTACAGGAAGGCATCTCGATTAAAACTTCGATTTGAAAATCAGATCTACA
AGGACGATGAGATAATGGGTGCAAACTCTCAACTGTCCATTGTATGTACT
GCGTTTCTTTCCCTGCGACACCCATACAGATGCGGCGTCTCCAGACCGAT
CCTGTGGAAAGTCCCACCGCCCAGCTTATGCGCTCTGAACCCTTCTACGC
CAACTACTTGGTCCCTTACTGCCTAAACCTTGCTTATACGAAGGTACTGA
AGGGCTCTCGATCTTGTCTATCGTTCTCTTTTGCCCGACGTAGTCATTTC
GTAGTTTTCCAGTCGCTCTGTGTCAGCAATCTTTGAGACCGAAACAAATG
TCTTCAGATTCGTGTAGTGCGTGCAGTGATCTCGAAAATTTTGTTCTCTT
GGTGTAAATACTAGGTCTAACCCTAGCTCTTGAGTACTGTCTCACTAGAT
CTTTCCCAACGCCCGTAGGGATGGGAAGTGCCTCCGGTACCTGCTTTCGA
GATAAACAAGGATTGCGCTTCTGCCCAAGCTTGGCGACAAGAATACCACG
AGTTGCTGGCTAAAAATAGGTTGTTAGGTGACGAAGAAAACTCAGGTATT
AAAGAAAGCGTTGAGGAAGAACAGGCTGGGGATTGA back to topCoding sequence (CDS) from alignment at CM002460.1:1061926..1062861- >rna3230 ID=rna3230|Name=rna3230|organism=Nannochloropsis gaditana|type=CDS|length=1536bp|location=Sequence derived from alignment at CM002460.1:1061926..1062861- (Nannochloropsis gaditana)
GGATGGGAAGTGCCTCCGGTACCTGCTTTCGAGATAAACAAGGATTGCGC
TTCTGCCCAAGCTTGGCGACAAGAATACCACGAGTTGCTGGCTAAAAATA
GGTTGTTAGGTGACGAAGAAAACTCAGGTATTAAAGAAAGCGTTGAGGAA
GAACAGGCTGGGGATTGAATGCGGCGTCTCCAGACCGATCCTGTGGAAAG
TCCCACCGCCCAGCTTATGCGCTCTGAACCCTTCTACGCCAACTACTTGG
TCCCTTACTGCCTAAACCTTGCTTATACGAAGTTGGACGTCAAAATCAAG
TTTGTTCCCCAAAAAGTGATCAATTATTTCTCGAAATTTTTGTGTGGCTG
GGTCATATGGTTTTTATTTCAAGAGATGTTGTGTGGATGGGAAGTGCCTC
CGGTACCTGCTTTCGAGATAAACAAGGATTGCGCTTCTGCCCAAGCTTGG
CGACAAGAATACCACGAGTTGCTGGCTAAAAATAGGTTGTTAGGTGACGA
AGAAAACTCAGGTATTAAAGAAAGCGTTGAGGAAGAACAGGCTGGGGATT
GAATGCGGCGTCTCCAGACCGATCCTGTGGAAAGTCCCACCGCCCAGCTT
ATGCGCTCTGAACCCTTCTACGCCAACTACTTGGTCCCTTACTGCCTAAA
CCTTGCTTATACGAAGTTGGACGTCAAAATCAAGTTTGTTCCCCAAAAAG
TGATCAATTATTTCTCGAAATTTTTGTGTGGCTGGGTCATATGGTTTTTA
TTTCAAGAGATGTTGTGTGGATGGGAAGTGCCTCCGGTACCTGCTTTCGA
GATAAACAAGGATTGCGCTTCTGCCCAAGCTTGGCGACAAGAATACCACG
AGTTGCTGGCTAAAAATAGGTTGTTAGGTGACGAAGAAAACTCAGGTATT
AAAGAAAGCGTTGAGGAAGAACAGGCTGGGGATTGAATGCGGCGTCTCCA
GACCGATCCTGTGGAAAGTCCCACCGCCCAGCTTATGCGCTCTGAACCCT
TCTACGCCAACTACTTGGTCCCTTACTGCCTAAACCTTGCTTATACGAAG
TTGGACGTCAAAATCAAGTTTGTTCCCCAAAAAGTGATCAATTATTTCTC
GAAATTTTTGTGTGGCTGGGTCATATGGTTTTTATTTCAAGAGATGTTGT
GTGGATGGGAAGTGCCTCCGGTACCTGCTTTCGAGATAAACAAGGATTGC
GCTTCTGCCCAAGCTTGGCGACAAGAATACCACGAGTTGCTGGCTAAAAA
TAGGTTGTTAGGTGACGAAGAAAACTCAGGTATTAAAGAAAGCGTTGAGG
AAGAACAGGCTGGGGATTGAATGCGGCGTCTCCAGACCGATCCTGTGGAA
AGTCCCACCGCCCAGCTTATGCGCTCTGAACCCTTCTACGCCAACTACTT
GGTCCCTTACTGCCTAAACCTTGCTTATACGAAGTTGGACGTCAAAATCA
AGTTTGTTCCCCAAAAAGTGATCAATTATTTCTCGAAATTTTTGTGTGGC
TGGGTCATATGGTTTTTATTTCAAGAGATGTTGTGT back to top
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