EWM27478.1, cds3198 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27478.1 vs. NCBI_GenBank
Match: gi|585109739|gb|EWM27478.1| (hypothetical protein Naga_100174g10 [Nannochloropsis gaditana]) HSP 1 Score: 639.032 bits (1647), Expect = 0.000e+0 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0 Query: 1 MLLNILAIRQSMYNSGNSATMPPAYQQEIRRVDPTADLPMIVARGAVRLAKKHYVISSMWVAGLIILTFFRGLTVPDENLTKYNQAVKSIDFNKLYRLQNDAWVAEEQFRHSKGWFSCDHVCQANKEVWNRALAKLQKLEREQEKKQREANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAMGRDEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANRLEQGGDARRPRRNLHYE 306 MLLNILAIRQSMYNSGNSATMPPAYQQEIRRVDPTADLPMIVARGAVRLAKKHYVISSMWVAGLIILTFFRGLTVPDENLTKYNQAVKSIDFNKLYRLQNDAWVAEEQFRHSKGWFSCDHVCQANKEVWNRALAKLQKLEREQEKKQREANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAMGRDEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANRLEQGGDARRPRRNLHYE Sbjct: 1 MLLNILAIRQSMYNSGNSATMPPAYQQEIRRVDPTADLPMIVARGAVRLAKKHYVISSMWVAGLIILTFFRGLTVPDENLTKYNQAVKSIDFNKLYRLQNDAWVAEEQFRHSKGWFSCDHVCQANKEVWNRALAKLQKLEREQEKKQREANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAMGRDEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANRLEQGGDARRPRRNLHYE 306
BLAST of EWM27478.1 vs. NCBI_GenBank
Match: gi|1072230375|gb|OEU15108.1| (hypothetical protein FRACYDRAFT_169912 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 201.445 bits (511), Expect = 1.643e-59 Identity = 107/288 (37.15%), Postives = 162/288 (56.25%), Query Frame = 0 Query: 24 AYQQEIRRVDPTADLPMIVARGAVRLAKKHYVISSMWVAGLIILTFFRGLTVPD-ENLTKYNQAVKSIDFNKLYRLQNDAWVAEEQFRHSKGWFSCDHVCQANKEVWNRALAKLQKLEREQEKKQREANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAMGRDEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANRLEQGGDARRPRRNL----HYE 306 A +Q I +P AD+ I+ RGA AK+H VI+ +V G++++ G + + + +YN + +ID Y ND + A + +R +KGWFSCD +CQ NK + A +L ++ E + +A GLFS GV E + FW F GK F +RQ+M+D +FMG R+MGRDE ++EY +++LM LLN ++GL +AL F LWS +R+Y P+ + + FF A +A + V TYL +YG A VY +K N +QG R + ++ HYE Sbjct: 15 AGRQVIVLPEP-ADVGKIIIRGASDFAKQHKVITGGYVLGILVIILIGGGSKLNYDQRREYNNIMNTIDVEAEYAASNDFFAANQNYRATKGWFSCDGLCQRNKRKMDDAKIRLDRIREEGNVRMSDAKNVAGLFSEIGVGEVQDAFWSYFSAGKKFAKRQSMWDAMFMGIRSMGRDENMVEYGMKVLMQVLLNFSIGLVMALVMFVVGLWSIVRSYQPNPIVAVAFFVSASCAAFSFVTTYLFAIYGAAAGGVYGVLKIAEGNLQIQQQGNRGGRQQPHMQNRPHYE 301
BLAST of EWM27478.1 vs. NCBI_GenBank
Match: gi|1210517886|dbj|GAX23287.1| (hypothetical protein FisN_21Hh028 [Fistulifera solaris]) HSP 1 Score: 178.333 bits (451), Expect = 1.230e-50 Identity = 97/289 (33.56%), Postives = 156/289 (53.98%), Query Frame = 0 Query: 22 PPAYQQEIRRVDPTADLPMIVARGAVRLAKKHYVISSMWVAGLIILTFFRGLTVP--DENLTKYNQAVKSIDFNKLYRLQNDAWVAEEQFRHSKGW-FSCDHVCQANKEVWNRALAKLQKLEREQEKKQREANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAM--GRDEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANRLEQGGDARRPRRNLHY 305 P QQ+I + + ++ RG+V +++ VIS + G+++L F G P E +Y++ ++++D YR +D W A ++ S+GW + CD VC N + A + +++E + +A GL S G+ E + FW F GK F +RQTM+DM+FMG R+M GRDE +E+ L++L+ LLN++MGL +AL F LW+ +R+Y P+ + + FF G I+A + V TYL +YG A VY +L A Q A + R+ + Y Sbjct: 4 PHRPQQQIIALPNPDQMGTLILRGSVAFVRRNPVISGTYFLGILLLIIFGGGGRPLTPEQHYEYHRILQTVDLQAEYRATDDYWRAYHAYQASRGWLWGCDAVCTRNYQRMKEAERIMHLIQQEGAARTADAKNAAGLLSEIGIGEVQDSFWGYFHAGKRFAKRQTMWDMMFMGIRSMSRGRDESWMEFALKVLLQVLLNLSMGLVMALIFFVMGLWTIVRSYQPNPLVAVLFFCGGAIAAFSFVVTYLLAVYGAAAGGVYT----VLKVAENASQARIADQQRQRVQY 288
BLAST of EWM27478.1 vs. NCBI_GenBank
Match: gi|1210514451|dbj|GAX26560.1| (hypothetical protein FisN_21Lh028 [Fistulifera solaris]) HSP 1 Score: 173.711 bits (439), Expect = 7.735e-49 Identity = 93/278 (33.45%), Postives = 152/278 (54.68%), Query Frame = 0 Query: 34 PTAD-LPMIVARGAVRLAKKHYVISSMWVAGLIILTFFRGLTVP--DENLTKYNQAVKSIDFNKLYRLQNDAWVAEEQFRHSKGW-FSCDHVCQANKEVWNRALAKLQKLEREQEKKQREANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAM--GRDEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANRLEQGGDARRPRRNLHY 305 P D + ++ RG+V +++ V+S + G+++L F G P E +Y++ ++++D YR +D W A ++ S+GW + CD VC N + A + +++E + +A GL S G+ E + FW F GK F +RQTM+DM+FMG R+M GRDE +E+ +++L+ LLN++MGL +AL F LW+ +R+Y P+ + + FF G I+A + V TYL +YG A VY +L A Q A + R+ + Y Sbjct: 15 PNPDQMGTLILRGSVAFIRRNPVVSGTYFLGILLLIIFGGGGRPLTPEQHYEYHRILQTVDLQAEYRATDDYWRAYHAYQASRGWLWGCDAVCTRNYQRMKEAERIMHLIQQEGAARTADAKNAAGLLSEIGIGEVQDSFWGYFHAGKRFAKRQTMWDMMFMGIRSMSRGRDESWMEFAVKVLLQVLLNLSMGLVMALIFFVMGLWTIVRSYQPNPLVAVLFFCGGAIAAFSFVVTYLLAVYGAAAGGVYT----ILKVAENASQARIADQQRQRVQY 288
BLAST of EWM27478.1 vs. NCBI_GenBank
Match: gi|224010525|ref|XP_002294220.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970237|gb|EED88575.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 166.392 bits (420), Expect = 5.807e-46 Identity = 92/261 (35.25%), Postives = 144/261 (55.17%), Query Frame = 0 Query: 35 TADLPMIVARGAVRLAKKHYVISSMWV----AGLIILTFFRGLTVPDENLTKYNQAVKSIDFNKLYRLQNDAWVAEEQFRHSKGWFSCDHVCQANKEVWNRALAKLQKLEREQEKKQREANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAMGRDEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANRLE 291 TAD+ + ++H VIS ++ + +++L G + + +YN+ + +ID Y + A + SKGWFSCD C K + + + +++ E + +A GLFS GV E + FW+ F+ GK F +RQ+M+D +FMG R+MGRDE ++EY+ ++L+ L+N +MGL +AL F F LW+ I+ Y P+ +TGLFFF A +A A V+TYL +YG A VY GV + R+E Sbjct: 13 TADIGTLALSAVTSFGRRHKVISFSYLYGLTSLILLLLLGSGTKLTIDQQRQYNRIMSTIDLQAEYSAASRYHNAYNNYYQSKGWFSCDAHCNHYKSIMKQRKHEWDEIKAEGNARMSDAKSVAGLFSEVGVNEVQDSFWEYFQSGKQFAKRQSMWDAMFMGMRSMGRDENMMEYLFKMLIQVLINFSMGLLMALVIFIFGLWNIIQTYQPNPLTGLFFFVTAACAAFAFVSTYLFAIYGAAAGGVY-GVVKMAEGNMRIE 272
BLAST of EWM27478.1 vs. NCBI_GenBank
Match: gi|219117091|ref|XP_002179340.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409231|gb|EEC49163.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 161.77 bits (408), Expect = 3.434e-44 Identity = 97/260 (37.31%), Postives = 145/260 (55.77%), Query Frame = 0 Query: 34 PTA-DLPMIVARGAVRLAKKHYVISSMWVAGLIILTFFRGLT-VPDENLTKYNQAVKSIDFNKLYRLQNDAWVAEEQFRHSKGWFSCDHVCQANKEVWNRALAKLQKLEREQEKKQREANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAMG--RDEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANR 289 P A +LP ++ RG A++H IS ++ GLI L + + +Y + +K+ID + N+ W A + +KGWF+CD +CQ NK +A L ++ RE + + +A GL+S GV E K FW+ F GK F +RQ+M+D LF+G R +G RDE +EY +ILM L+N ++GL +AL F F LW+ +R+Y P + + FF A A A VATYL +YG + A++Y GV L + R Sbjct: 17 PDAHELPALLVRGVTNFARRHRYISGAYILGLISLLLIGSGAKLSLQQTREYTKLMKTIDLQAEFDASNEYWKARNAYHGTKGWFTCDELCQRNKARMVKAETVLGEIRREGQARMSDAKAVAGLWSEIGVGEVKDSFWQYFYSGKQFARRQSMWDALFIGIRQIGRSRDESWIEYAFKILMQVLINFSLGLLMALGMFVFGLWAIVRSYQPSPLVAVAFFVAAACGAFAFVATYLMAIYGASAASIY-GVFKLAETSAR 275
BLAST of EWM27478.1 vs. NCBI_GenBank
Match: gi|551670981|ref|XP_005838248.1| (hypothetical protein GUITHDRAFT_151026 [Guillardia theta CCMP2712] >gi|428182407|gb|EKX51268.1| hypothetical protein GUITHDRAFT_151026 [Guillardia theta CCMP2712]) HSP 1 Score: 161.77 bits (408), Expect = 1.529e-43 Identity = 100/297 (33.67%), Postives = 163/297 (54.88%), Query Frame = 0 Query: 26 QQEIRRVDPT----ADLP---MIVARGAVRLAKKHYVISSMWVAGLIILTFFRGLTVPDENLTKYNQAVKSIDFNK--LYRLQNDAWVAEEQFRHSKGW--FSCDHVCQANKEVWNRALAKLQKLERE--QEKKQR-----EANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAMGRDEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVK-ALLNNANRLEQGGDARRPRRNL 303 ++++ R PT DLP ++V RGA + +K + + +++ GL ++ F G+ + +Y++ ++ + + +L+ ++ S+G+ FSCD C RA LQKL++E + K Q+ EA +G+ S Y VEE ++LFW +F GK F +R +M+D+LFMG +MGRDEGL +IL+ ++ L N +GL AL F + LW +R+Y PD VT + F I+A +MVATYL LYG+ A+ Y+ V+ A+L +E G PR ++ Sbjct: 5 RRDVSRHTPTRLTAEDLPPIQVVVYRGAKAIVQKFPITTFLYILGLCLMLFATGMMPSEGANEEYSRLLQEAQYETSMVDQLERKVAAHSRKYHESRGFLGFSCDSSCM-------RAYDNLQKLQKELKEAKSQQFQALSEAKSKVGILSLYAVEEARELFWGTFAQGKGFAKRASMWDLLFMGLGSMGRDEGLASFILRFVIQVLFNFTLGLVGALLAFIWYLWDVVRSYQPDPVTAVVSFLLFSIAAISMVATYLIALYGSVAASGYMIVRTAVLG----IENGNSRSGPRAHI 290
BLAST of EWM27478.1 vs. NCBI_GenBank
Match: gi|397624706|gb|EJK67479.1| (hypothetical protein THAOC_11479 [Thalassiosira oceanica]) HSP 1 Score: 166.392 bits (420), Expect = 1.446e-42 Identity = 99/277 (35.74%), Postives = 149/277 (53.79%), Query Frame = 0 Query: 21 MPPAYQQEIRRVDPTADLPMIVARGAVRLAKKHYVISSMWVAGLIILTFFRG------LTVPDENLTKYNQAVKSIDFNKLYRLQNDAWVAEEQFRHSKGWFSCDHVCQANKEVWNRALAKLQKLEREQEKKQREANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAMGRDEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANRLE 291 +P Q+I D DL + A AK+H V+++ ++ GL L LT+ + +YN+ + +ID Y + A + SKGW SCD CQ K + ++ + +++ E + +A GLFS GV E FW+ F GK F +RQ+ +D +F+GFR+MGRDE EY+L++LM L+N +MGL +AL F F LW+ I+ Y P+ +T L FF AV +A A V+TYL LYG A +Y G+ + ++ RLE Sbjct: 549 LPLPVGQQIINAD---DLGTLALSTATSFAKRHKVLTTSYLYGLTTLLLILLMGGGTKLTI--DQKRQYNRIMNTIDLQAEYNAADRYHAAYANYYQSKGWLSCDAHCQHYKSIMDKRKFEWDEIKAEGNARMSDAKNVAGLFSEVGVGEVTDSFWEYFASGKRFAKRQSWWDAIFIGFRSMGRDEHFSEYVLRMLMQVLINFSMGLLMALVIFIFGLWNIIQTYQPNPITALVFFVTAVCAAFAFVSTYLLTLYGAAAGGLY-GMVKMAESSGRLE 819
BLAST of EWM27478.1 vs. NCBI_GenBank
Match: gi|219117087|ref|XP_002179338.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409229|gb|EEC49161.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 157.147 bits (396), Expect = 1.857e-42 Identity = 97/260 (37.31%), Postives = 144/260 (55.38%), Query Frame = 0 Query: 34 PTA-DLPMIVARGAVRLAKKHYVISSMWVAGLIILTFFRGLT-VPDENLTKYNQAVKSIDFNKLYRLQNDAWVAEEQFRHSKGWFSCDHVCQANKEVWNRALAKLQKLEREQEKKQREANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAMG--RDEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANR 289 P A +LP ++ RG A +H IS ++ GLI L + + + +Y + +K+ID + N+ W A + +KGWF+CD +CQ NK +A L ++ RE + + +A GL+S GV E K FW+ F GK F +RQ+M+D LF+G R +G RDE +EY +ILM L+N ++GL +AL F LW+ +R+Y P + + FF A A A VATYL +YG + A+VY GV L + R Sbjct: 17 PDAHELPALLVRGVTNFACRHRYISGAYILGLISLLLIGSGSKLSLQQTQEYTKLMKTIDLQAEFDASNEYWKARNAYHGTKGWFTCDELCQRNKARMVKAETVLGEIRREGQARMSDAKAVAGLWSEIGVGEVKDSFWQYFYSGKQFAKRQSMWDALFIGIRQIGRSRDESWIEYAFKILMQVLINFSLGLLMALGMFVLGLWATVRSYQPSPLVAVAFFVAAACGAFAFVATYLMAIYGASAASVY-GVFKLAETSAR 275
BLAST of EWM27478.1 vs. NCBI_GenBank
Match: gi|298705192|emb|CBJ28623.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 150.214 bits (378), Expect = 7.726e-40 Identity = 94/264 (35.61%), Postives = 140/264 (53.03%), Query Frame = 0 Query: 41 IVARGAVRLAKKHYVISSMWVAGLIILTFFRGLTVPDENLTKYNQAVKSIDFNKLYRLQNDAWVAEEQFRHSKGWF-SCDHVCQANKEVWNRALAKLQKLEREQEKKQREANKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAMGR-DEGLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFFAGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANRLE----QGGDARR 298 +V A +L K+H VIS WV GL++ T G T + Y + +D + R Q + ++ +R SKG F +C+ C AN++ + R L + K + +A LG+FS GVEE + LFW+ GK F +R TM+D +F+G M R DEGL + +I F++N+ MGLF+A+ F FS+W+ I +Y PD ++ L F A A + A +M+AT+L L VY K L ++E QG D RR Sbjct: 24 LVVSNAKQLVKRHPVISVSWVVGLLVSTLASGYTPSTTAMQNYENKMIGLDDESVMRAQGEMVYWDDIYRRSKGMFWTCNEQCTANRKEFERRRKTYLDLNKAYLKGEADAKSELGIFSEDGVEETRDLFWRKVSGGKQFAKRATMWDAMFVGIGTMTRRDEGLASIVARIAFRFVVNLTMGLFMAVFQFLFSMWTVIWSYQPDPLSTLAFAAMAALGAVSMLATWLLGLAAVGVTGVYTVAK--LAETAQIEAARQQGQDPRR 285 The following BLAST results are available for this feature:
BLAST of EWM27478.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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