Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100174g10.7293.mrna |
Orig protein id | gnl|cribi|Naga_100174g10.7293 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002460.1 | supercontig | CM002460.1:996965..998769 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3206 ID=rna3206|Name=rna3206|organism=Nannochloropsis gaditana|type=mRNA|length=1158bp ATGGACAGGACTTATACTACCTGGGCACAATGGGTTTTAACCTCCCAGTT TGCTTCCTCTTCGATAGAGGTTGAGGCCAGCTTAGCACCCTTCTCAGACG TATCGGTTCAAAGCATGGAGTGGGAAATGAGTTTCACAGCTCAAAAGCTG ATGCAAGCGCGGCGGATGCAGGAATTGCAGATGGTGGAGCGAAACATCGC TATAGACAGGGACGGAGGAGGGAGCAATAAAGACAAGGACTTGCATGATA GGTTAAGCGGAAGTGACAGCGAGGAGTACAACGACGAAGAATCAGCAATT TCACTACTACGTGGAAGAGCAAAGCATATTTATCCTGCGCGGAGAGCGGG TGGAAGCAGGGAAAATGGCCCCTCTAGGGAAAATCGGGTTGAGCGCGGAA GGGAACGGCCACCCTGGGTACAGCGCCCTCTCTCCCTTTTCCTGGGGGCC TGCTTCCCCTGCCTTCTCCTTGCACGTGCCGCAAGTCTACTGGCGCGAAG CCCGATGAATGCAGGTAACAGGGGCAAGTCGCCGTGTAACGGCTTAGACA TGGATGGGTGGAAAACCTGTCTTTCCGCGGCCGTCGTGGCCATGGCGTGC CCGTTGCCCTGCCTGTGGCCCTCTTTGTGGTGGTGGAGGAAGCGACAGCG CCACCGGATCCTCCAGCGCTTCTCTCACTTCCCCGACCCTGTCCCCACGT CTTCCTCCGGCACATCCGGGTCAGATGGCCGGAAGATGGGCGTGCTAACG GCCTGTCAGCTGTGTGCCCCCTGCCCTCTGGTAAGCGAAGTCGCCTTCTT GGAAGAGGTAGAGAGACTCCAGAGGGAGAAGGAGATGCTCTCAGGCAGCA CGGGGACGGAAGGTGACGACGAGAACGAGTGTCTGGATCCAGGCAAGTCC ATGGCAACGTGCAACCTGAGGAGCGACAGTGCCTTGAGAGATTCGCCCGC GAAGCCTTTCCCTCCGACCCCCGCCGAGGGAAAAAAGGAAAATGGGGGTA AGCGGAGGGATTCTGTGGCACAATGGCAGGCGTTTGAGAGCTGGGATCTC CGCCCGGTGGGTGGCGGGACCACCGCCGTCGCGGCGACTGGACCGAGCCT GCGGGCGGTGGAAAACGAGAAGGATACCCGGACAAATTGGGATAGGGGGA AGGAGTGA back to topprotein sequence of rna3206 >rna3206-protein ID=rna3206-protein|Name=rna3206|organism=Nannochloropsis gaditana|type=polypeptide|length=306bp MLLNILAIRQSMYNSGNSATMPPAYQQEIRRVDPTADLPMIVARGAVRLA KKHYVISSMWVAGLIILTFFRGLTVPDENLTKYNQAVKSIDFNKLYRLQN DAWVAEEQFRHSKGWFSCDHVCQANKEVWNRALAKLQKLEREQEKKQREA NKHLGLFSTYGVEECKQLFWKSFKWGKNFGQRQTMFDMLFMGFRAMGRDE GLLEYILQILMHFLLNMAMGLFVALTGFTFSLWSFIRAYSPDLVTGLFFF AGAVISATAMVATYLTLLYGTAGATVYVGVKALLNNANRLEQGGDARRPR RNLHYE back to topmRNA from alignment at CM002460.1:996965..998769+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3206 ID=rna3206|Name=rna3206|organism=Nannochloropsis gaditana|type=mRNA|length=1805bp|location=Sequence derived from alignment at CM002460.1:996965..998769+ (Nannochloropsis gaditana) TGGTCTATCGGTGTGTGCATATCAAAGTTTTAATCCATTAAAAAATAAGT
GTGAGTCCATGTTCCGTTCGCAAAGAGCACTCGCTGAACACTCATCAAGA
TGCACGTAGTCAAGACGCGCCAGGTAATTGAAGGGAATAAAGCATGTGCT
TTCTTCCGCCCAGGAGGAAATGCCATACCATTGTGCCCAGGTAGTATAAG
TCCTGTCCATGCGCAGGCTACTGCTTGAGAAGGGACTCCTTACCTTCACG
ACGACCCACACGGTCTCACTAGCATCTCTCCCGCTTGCCCTCCACTTTGC
GTCCCCATGTTGCTAAACATATTGGCTATTCGACAGAGCATGTACAATTC
TGGCAACAGCGCCACCATGCCTCCGGCATACCAGCAGGAGATACGTAGGG
TGGATCCTACCGCGGACTTACCCATGATCGTGGCACGGGTAAGGCTTTTT
TCCTCGGCAGTGTGCCTGGcggtcctccctcttgaagTTGTGGGTCTCAG
ACCACCGCCCGTCTGACACCGCTTTTTTATGCTCGCCCAGGGAGCTGTCC
GGCTGGCGAAGAAACACTATGTTATTTCATCCATGTGGGTGGCGGGTCTC
ATCATTTTGACCTTTTTTCGAGGCCTGACTGTCCCGGATGAAAACTTGAC
GAAATACAATCAAGCTGTCAAGTCGATCGACTTCAATAAGCTCTACAGGC
TTCAAAATGATGCATGGGTAGCGGAGGAGCAGTTTCGTCATAGCAAAGGC
TGGTTTTCTTGCGATCATGTGTGCCAGGTAGGTCCAGAGCGCTTTGTGGG
GGTGCACCCGTCCGGTAAATCTctggacggagggcgggaaccTAGCCGAA
GATTATCAAGAAAGTGTCGTACTGGCGCTCTCATCCCTTAACTGTTGATA
TTTGTTTTACCTGAAGGCCAATAAGGAGGTGTGGAACAGGGCCCTGGCCA
AGCTGCAGAAgctggaaagggagcaagaaaagaagcaaCGCGAGGCCAAC
AAGCACCTTGGTCTTTTCTCTACATACGGCGTGGAAGAATGCAAACAGCT
CTTCTGGAAATCATTTAAATGGGGCAAGAATTTTGGCCAGCGTCAGACCA
TGTTTGATATGCTTTTTATGGGCTTTCGCGCCATGGGTCGTGACGAGGGT
TTGCTGGAGTACATTTTGCAGgtaaagggaagggagggcgataCGGTTGC
GGTGTAAGGCAATCTGTAAATCTGTCCTATGGAAGCTAGTTGCACGAACG
TGCACAGGGCGCAATCTCATGATGctctcgtcctcatccccgACGCACTA
GATATTGATGCACTTCCTGCTGAACATGGCCATGGGTCTCTTCGTCGCCT
TGACCGGCTTCACTTTTTCCCTCTGGTCCTTCATCCGTGCTTATTCTCCG
GACCTTGTGACCggccttttctttttcgcggGGGCTGTCATTAGCGCCAC
TGCAATGGTAGCTACCTATCTCACCCTGTTGTATGGAACGGCGGGTGCGA
CCGTTTATGTGGGTGTCAAGGCCCTCTTAAACAACGCCAACCGTCtcgag
cagggcggggatGCGAGGAGGCCACGGCGGAATTTGCATTATGAGTAAGG
AATATGCCACGTCGGATGCAAGAATTTGGTAGAATTTACGTTGATGATGG
AAGGCTTGTTAATAACATACCGTCTAACACCTTTTCTCAGACGTTGTTTT
CCCGCACTGAGTTTCTCTACATTTGTGCTGCTTTCAAATGTGCGACCAAA
CCAAGTTCATGCTTGACATTTATCTTGTCATACATCTACTTCTGCGCAGC
Aaatc back to topCoding sequence (CDS) from alignment at CM002460.1:996965..998769+ >rna3206 ID=rna3206|Name=rna3206|organism=Nannochloropsis gaditana|type=CDS|length=3684bp|location=Sequence derived from alignment at CM002460.1:996965..998769+ (Nannochloropsis gaditana) ATGTTGCTAAACATATTGGCTATTCGACAGAGCATGTACAATTCTGGCAA CAGCGCCACCATGCCTCCGGCATACCAGCAGGAGATACGTAGGGTGGATC CTACCGCGGACTTACCCATGATCGTGGCACGGGGAGCTGTCCGGCTGGCG AAGAAACACTATGTTATTTCATCCATGTGGGTGGCGGGTCTCATCATTTT GACCTTTTTTCGAGGCCTGACTGTCCCGGATGAAAACTTGACGAAATACA ATCAAGCTGTCAAGTCGATCGACTTCAATAAGCTCTACAGGCTTCAAAAT GATGCATGGGTAGCGGAGGAGCAGTTTCGTCATAGCAAAGGCTGGTTTTC TTGCGATCATGTGTGCCAGGCCAATAAGGAGGTGTGGAACAGGGCCCTGG CCAAGCTGCAGAAgctggaaagggagcaagaaaagaagcaaCGCGAGGCC AACAAGCACCTTGGTCTTTTCTCTACATACGGCGTGGAAGAATGCAAACA GCTCTTCTGGAAATCATTTAAATGGGGCAAGAATTTTGGCCAGCGTCAGA CCATGTTTGATATGCTTTTTATGGGCTTTCGCGCCATGGGTCGTGACGAG GGTTTGCTGGAGTACATTTTGCAGATATTGATGCACTTCCTGCTGAACAT GGCCATGGGTCTCTTCGTCGCCTTGACCGGCTTCACTTTTTCCCTCTGGT CCTTCATCCGTGCTTATTCTCCGGACCTTGTGACCggccttttctttttc gcggGGGCTGTCATTAGCGCCACTGCAATGGTAGCTACCTATCTCACCCT GTTGTATGGAACGGCGGGTGCGACCGTTTATGTGGGTGTCAAGGCCCTCT TAAACAACGCCAACCGTCtcgagcagggcggggatGCGAGGAGGCCACGG CGGAATTTGCATTATGAGTAAATGTTGCTAAACATATTGGCTATTCGACA GAGCATGTACAATTCTGGCAACAGCGCCACCATGCCTCCGGCATACCAGC AGGAGATACGTAGGGTGGATCCTACCGCGGACTTACCCATGATCGTGGCA CGGGGAGCTGTCCGGCTGGCGAAGAAACACTATGTTATTTCATCCATGTG GGTGGCGGGTCTCATCATTTTGACCTTTTTTCGAGGCCTGACTGTCCCGG ATGAAAACTTGACGAAATACAATCAAGCTGTCAAGTCGATCGACTTCAAT AAGCTCTACAGGCTTCAAAATGATGCATGGGTAGCGGAGGAGCAGTTTCG TCATAGCAAAGGCTGGTTTTCTTGCGATCATGTGTGCCAGGCCAATAAGG AGGTGTGGAACAGGGCCCTGGCCAAGCTGCAGAAgctggaaagggagcaa gaaaagaagcaaCGCGAGGCCAACAAGCACCTTGGTCTTTTCTCTACATA CGGCGTGGAAGAATGCAAACAGCTCTTCTGGAAATCATTTAAATGGGGCA AGAATTTTGGCCAGCGTCAGACCATGTTTGATATGCTTTTTATGGGCTTT CGCGCCATGGGTCGTGACGAGGGTTTGCTGGAGTACATTTTGCAGATATT GATGCACTTCCTGCTGAACATGGCCATGGGTCTCTTCGTCGCCTTGACCG GCTTCACTTTTTCCCTCTGGTCCTTCATCCGTGCTTATTCTCCGGACCTT GTGACCggccttttctttttcgcggGGGCTGTCATTAGCGCCACTGCAAT GGTAGCTACCTATCTCACCCTGTTGTATGGAACGGCGGGTGCGACCGTTT ATGTGGGTGTCAAGGCCCTCTTAAACAACGCCAACCGTCtcgagcagggc ggggatGCGAGGAGGCCACGGCGGAATTTGCATTATGAGTAAATGTTGCT AAACATATTGGCTATTCGACAGAGCATGTACAATTCTGGCAACAGCGCCA CCATGCCTCCGGCATACCAGCAGGAGATACGTAGGGTGGATCCTACCGCG GACTTACCCATGATCGTGGCACGGGGAGCTGTCCGGCTGGCGAAGAAACA CTATGTTATTTCATCCATGTGGGTGGCGGGTCTCATCATTTTGACCTTTT TTCGAGGCCTGACTGTCCCGGATGAAAACTTGACGAAATACAATCAAGCT GTCAAGTCGATCGACTTCAATAAGCTCTACAGGCTTCAAAATGATGCATG GGTAGCGGAGGAGCAGTTTCGTCATAGCAAAGGCTGGTTTTCTTGCGATC ATGTGTGCCAGGCCAATAAGGAGGTGTGGAACAGGGCCCTGGCCAAGCTG CAGAAgctggaaagggagcaagaaaagaagcaaCGCGAGGCCAACAAGCA CCTTGGTCTTTTCTCTACATACGGCGTGGAAGAATGCAAACAGCTCTTCT GGAAATCATTTAAATGGGGCAAGAATTTTGGCCAGCGTCAGACCATGTTT GATATGCTTTTTATGGGCTTTCGCGCCATGGGTCGTGACGAGGGTTTGCT GGAGTACATTTTGCAGATATTGATGCACTTCCTGCTGAACATGGCCATGG GTCTCTTCGTCGCCTTGACCGGCTTCACTTTTTCCCTCTGGTCCTTCATC CGTGCTTATTCTCCGGACCTTGTGACCggccttttctttttcgcggGGGC TGTCATTAGCGCCACTGCAATGGTAGCTACCTATCTCACCCTGTTGTATG GAACGGCGGGTGCGACCGTTTATGTGGGTGTCAAGGCCCTCTTAAACAAC GCCAACCGTCtcgagcagggcggggatGCGAGGAGGCCACGGCGGAATTT GCATTATGAGTAAATGTTGCTAAACATATTGGCTATTCGACAGAGCATGT ACAATTCTGGCAACAGCGCCACCATGCCTCCGGCATACCAGCAGGAGATA CGTAGGGTGGATCCTACCGCGGACTTACCCATGATCGTGGCACGGGGAGC TGTCCGGCTGGCGAAGAAACACTATGTTATTTCATCCATGTGGGTGGCGG GTCTCATCATTTTGACCTTTTTTCGAGGCCTGACTGTCCCGGATGAAAAC TTGACGAAATACAATCAAGCTGTCAAGTCGATCGACTTCAATAAGCTCTA CAGGCTTCAAAATGATGCATGGGTAGCGGAGGAGCAGTTTCGTCATAGCA AAGGCTGGTTTTCTTGCGATCATGTGTGCCAGGCCAATAAGGAGGTGTGG AACAGGGCCCTGGCCAAGCTGCAGAAgctggaaagggagcaagaaaagaa gcaaCGCGAGGCCAACAAGCACCTTGGTCTTTTCTCTACATACGGCGTGG AAGAATGCAAACAGCTCTTCTGGAAATCATTTAAATGGGGCAAGAATTTT GGCCAGCGTCAGACCATGTTTGATATGCTTTTTATGGGCTTTCGCGCCAT GGGTCGTGACGAGGGTTTGCTGGAGTACATTTTGCAGATATTGATGCACT TCCTGCTGAACATGGCCATGGGTCTCTTCGTCGCCTTGACCGGCTTCACT TTTTCCCTCTGGTCCTTCATCCGTGCTTATTCTCCGGACCTTGTGACCgg ccttttctttttcgcggGGGCTGTCATTAGCGCCACTGCAATGGTAGCTA CCTATCTCACCCTGTTGTATGGAACGGCGGGTGCGACCGTTTATGTGGGT GTCAAGGCCCTCTTAAACAACGCCAACCGTCtcgagcagggcggggatGC GAGGAGGCCACGGCGGAATTTGCATTATGAGTAA back to top
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