EWM27516.1, cds3152 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27516.1 vs. NCBI_GenBank
Match: gi|585109782|gb|EWM27516.1| (hypothetical protein Naga_100101g13 [Nannochloropsis gaditana]) HSP 1 Score: 1597.41 bits (4135), Expect = 0.000e+0 Identity = 773/773 (100.00%), Postives = 773/773 (100.00%), Query Frame = 0 Query: 1 MALNSILVSTLGAVSVILVLSAFVTGGTFYNYIARHEQGIPEMFDSKASEVSPSYSTLSRLPSLRGRYAVDKMAGSGSAPRRQPAKTENTSQVRRFLAFIPLLGLKNDDWGSRESERLVLEAWNALANHVRLMNESVELRVVGMVEDASYCDPRLFGPSASLASSAVSCLTLGPSCNQSGQKSAPTLDCIFEVATRVGDAYGANVYILANGDVVFTPTFTEAIAFALNTFGNGPPVREGEEGVAPSPRLTLQPPASASGASGFPPPCAEASQHEGFVLVGRRLDMNVSIPKVPDDPPLTAEDLLAKDVNVRLHPPTGIDYFAFTANLLPRSFPPFLIGRWRWDNTLLLHFLLSKGASIDATEVVHALHIGMAPFDSAEHATRAGAHYNDVLAASTAGSAHKLGRSDFTTYVLKDGGMPEEEDEVAPHHLALRLERRSHPLIHGQLAGLRVAARGFAFPNASHEERNAHVQADENSGKTIFLLPVPAGEVASAMEWACWAGDMGLTNYLFVAASRNDSCAIEAALAVINKGRKGGEVLHMDPSQLTIAGWGGSKPYFNQKKSGIASRAVLDYGTGALMQRLLRLGLSVVLVPTLTPFPPPSRSASSASPHPHLPSFWGKNADAKMKGDEGTGRTSQEVIQSVMQASDDAACDVILWEETHTSAPGHTDTLSKHTYTKESSSKEKADKRANFLYARVEASSQIMKNWDTVFNCLTEDVRSSKSKRGWCFAELKTSCHHVVPAVSVSNYFENLSADQRLWSASSLQCRQKYKNRGT 773 MALNSILVSTLGAVSVILVLSAFVTGGTFYNYIARHEQGIPEMFDSKASEVSPSYSTLSRLPSLRGRYAVDKMAGSGSAPRRQPAKTENTSQVRRFLAFIPLLGLKNDDWGSRESERLVLEAWNALANHVRLMNESVELRVVGMVEDASYCDPRLFGPSASLASSAVSCLTLGPSCNQSGQKSAPTLDCIFEVATRVGDAYGANVYILANGDVVFTPTFTEAIAFALNTFGNGPPVREGEEGVAPSPRLTLQPPASASGASGFPPPCAEASQHEGFVLVGRRLDMNVSIPKVPDDPPLTAEDLLAKDVNVRLHPPTGIDYFAFTANLLPRSFPPFLIGRWRWDNTLLLHFLLSKGASIDATEVVHALHIGMAPFDSAEHATRAGAHYNDVLAASTAGSAHKLGRSDFTTYVLKDGGMPEEEDEVAPHHLALRLERRSHPLIHGQLAGLRVAARGFAFPNASHEERNAHVQADENSGKTIFLLPVPAGEVASAMEWACWAGDMGLTNYLFVAASRNDSCAIEAALAVINKGRKGGEVLHMDPSQLTIAGWGGSKPYFNQKKSGIASRAVLDYGTGALMQRLLRLGLSVVLVPTLTPFPPPSRSASSASPHPHLPSFWGKNADAKMKGDEGTGRTSQEVIQSVMQASDDAACDVILWEETHTSAPGHTDTLSKHTYTKESSSKEKADKRANFLYARVEASSQIMKNWDTVFNCLTEDVRSSKSKRGWCFAELKTSCHHVVPAVSVSNYFENLSADQRLWSASSLQCRQKYKNRGT Sbjct: 1 MALNSILVSTLGAVSVILVLSAFVTGGTFYNYIARHEQGIPEMFDSKASEVSPSYSTLSRLPSLRGRYAVDKMAGSGSAPRRQPAKTENTSQVRRFLAFIPLLGLKNDDWGSRESERLVLEAWNALANHVRLMNESVELRVVGMVEDASYCDPRLFGPSASLASSAVSCLTLGPSCNQSGQKSAPTLDCIFEVATRVGDAYGANVYILANGDVVFTPTFTEAIAFALNTFGNGPPVREGEEGVAPSPRLTLQPPASASGASGFPPPCAEASQHEGFVLVGRRLDMNVSIPKVPDDPPLTAEDLLAKDVNVRLHPPTGIDYFAFTANLLPRSFPPFLIGRWRWDNTLLLHFLLSKGASIDATEVVHALHIGMAPFDSAEHATRAGAHYNDVLAASTAGSAHKLGRSDFTTYVLKDGGMPEEEDEVAPHHLALRLERRSHPLIHGQLAGLRVAARGFAFPNASHEERNAHVQADENSGKTIFLLPVPAGEVASAMEWACWAGDMGLTNYLFVAASRNDSCAIEAALAVINKGRKGGEVLHMDPSQLTIAGWGGSKPYFNQKKSGIASRAVLDYGTGALMQRLLRLGLSVVLVPTLTPFPPPSRSASSASPHPHLPSFWGKNADAKMKGDEGTGRTSQEVIQSVMQASDDAACDVILWEETHTSAPGHTDTLSKHTYTKESSSKEKADKRANFLYARVEASSQIMKNWDTVFNCLTEDVRSSKSKRGWCFAELKTSCHHVVPAVSVSNYFENLSADQRLWSASSLQCRQKYKNRGT 773
BLAST of EWM27516.1 vs. NCBI_GenBank
Match: gi|544210562|ref|XP_005535682.1| (hypothetical protein CYME_CME193C [Cyanidioschyzon merolae strain 10D] >gi|449015994|dbj|BAM79396.1| hypothetical protein CYME_CME193C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 78.5666 bits (192), Expect = 8.247e-12 Identity = 57/147 (38.78%), Postives = 72/147 (48.98%), Query Frame = 0 Query: 268 AEASQHEGFVLVGRRLDMNVSIPKVPDDPPLTAEDLLAKDVNVRLHPPTGIDYFAFTANLLP-RSFPPFLIGRWRWDNTLLLHFLLS-KGASIDATEVVHALHIGMAPFDSAEHATRAGAHYNDVLAAST-AGSAHKLGRSDFTTYV 411 A Q F + GRR D N+S P D N LH G+DYF P +S PPF+IG WRWDN L +F+ + A IDAT V+ ALH+ AP A A R GA YN+ L +G LGRSD + ++ Sbjct: 202 AARQQMGSFAVFGRRYDRNLS-PGASD--------------NEELHAAWGLDYFICRKQDFPVQSMPPFVIGNWRWDNWLADYFIRHPQIADIDATAVIRALHLSGAPHVPA--AERDGAVYNEGLVPRVDSGDFRDLGRSDNSNWI 331
BLAST of EWM27516.1 vs. NCBI_GenBank
Match: gi|1084540627|gb|OGO00879.1| (hypothetical protein A2Y90_02810 [Chloroflexi bacterium RBG_13_52_12]) HSP 1 Score: 73.1738 bits (178), Expect = 2.534e-10 Identity = 39/103 (37.86%), Postives = 55/103 (53.40%), Query Frame = 0 Query: 266 PCAEASQHEGFVLVGRRLDMNVSIPKVPDDPPLTAEDLLAKDVNVRLHPPTGIDYFAFTANLLPRSFPPFLIGRWRWDNTLLLHFLLSKGASIDATEVVHALH 368 P Q + F++VGRR D+++ P + P + + +LHPP+GIDYF F L R PPF +GR WDN L+ + K IDAT V+ A+H Sbjct: 100 PAIRQVQKQSFLIVGRRWDIDIKEPLDFNKPDWESNLRVRVTGEGKLHPPSGIDYFTFPRGLY-RDIPPFAVGRTAWDNWLIYRARVMKLPVIDATRVITAIH 201
BLAST of EWM27516.1 vs. NCBI_GenBank
Match: gi|694526169|ref|XP_009492639.1| (hypothetical protein, variant 4 [Fonticula alba] >gi|627951150|gb|KCV72939.1| hypothetical protein, variant 4 [Fonticula alba]) HSP 1 Score: 71.2478 bits (173), Expect = 4.470e-9 Identity = 70/247 (28.34%), Postives = 113/247 (45.75%), Query Frame = 0 Query: 278 LVGRRLDMNVSIPKVPD-DPPLTAEDL-LAKDVNVRLHPPTGIDYFAFTANLLPRSFPPFLIGRWRWDNTLLLHFLLSK-GASIDATEVVHALHIGMAPFDSAEHATRAGAHYNDVLAASTAGSAHKLGRSDFTTYVLKDGGMPEEE-DEVAPHHLALRLERRSHPLIHGQLAGLRVAARGFAFPNASHEERNAHV------QADENSGKTIFLLPVPAGEVASAMEWACWAGDMGLTNYLFVAASR 514 +VG+R+D + P++ D + P+ ED + + H GIDYF + R PPF++GR RWDN LL F+ ++ A++DATEVV A+H+ + +R+G YN L S A KLG + Y L +P + ++P +L S G +A A P + + + QAD + + + + V +G + ++ W C +G N+LF A R Sbjct: 1 MVGQRID--ILYPRLIDFNNPMWREDFKRTVERYGKTHGKYGIDYFLYRTRY-ARPMPPFIVGRVRWDNWLLAQFIGNQNAAAVDATEVVFAVHLNHMKVGGSH--SRSGTDYNINLTKSDAVDPKKLGDVESCDYYL--APIPNSPGNALSPKNLPAGESAPSVFTRPGADFSTTSSAPSGACPFCTLRPKEQSIDVMLAKQADPQT-RDVIVATVNSGYLDFSINWMCTLLRIGRKNFLFHATDR 239
BLAST of EWM27516.1 vs. NCBI_GenBank
Match: gi|694526181|ref|XP_009492643.1| (hypothetical protein H696_00498 [Fonticula alba] >gi|627951146|gb|KCV72935.1| hypothetical protein H696_00498 [Fonticula alba]) HSP 1 Score: 70.4774 bits (171), Expect = 9.339e-9 Identity = 49/138 (35.51%), Postives = 73/138 (52.90%), Query Frame = 0 Query: 278 LVGRRLDMNVSIPKVPD-DPPLTAEDL-LAKDVNVRLHPPTGIDYFAFTANLLPRSFPPFLIGRWRWDNTLLLHFLLSK-GASIDATEVVHALHIGMAPFDSAEHATRAGAHYNDVLAASTAGSAHKLGRSDFTTYVL 412 +VG+R+D + P++ D + P+ ED + + H GIDYF + R PPF++GR RWDN LL F+ ++ A++DATEVV A+H+ + +R+G YN L S A KLG + Y L Sbjct: 1 MVGQRID--ILYPRLIDFNNPMWREDFKRTVERYGKTHGKYGIDYFLYRTRY-ARPMPPFIVGRVRWDNWLLAQFIGNQNAAAVDATEVVFAVHLNHMKVGGSH--SRSGTDYNINLTKSDAVDPKKLGDVESCDYYL 133 The following BLAST results are available for this feature:
BLAST of EWM27516.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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