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Properties
| Property Name | Value |
|---|
| Product | presenilin-like protein |
| Orig transcript id | gnl|cribi|Naga_100101g18.9058.mrna |
| Orig protein id | gnl|cribi|Naga_100101g18.9058 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:863779..865447 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3155 ID=rna3155|Name=rna3155|organism=Nannochloropsis gaditana|type=mRNA|length=576bp
ATGGTGTTTGGATGGGGCAAGGGCAAAGCCAAGCCCGAGAAGCCAGTGGA
GCCTGAGCCTCCTAAAGTGCCGCGAATCGATTTGAGCAAGCCTCGATGGG
ACCAAAGCACCTTCGAAGGCCGTGCTCGCCATTTCTTCAGCACAACTAAT
CCTCTCAACAGTCTTGCCTCAGATGCGGAGCTGGACCGTGCCAAGACGCT
TCTGGAGCAGTACAAAGCAGGCACGGAGCCCCCGGGGACGACGGAGGAAC
AGGTGTGGGAAGCTAAGCACCTGTATGACTCTGCCTATCACCCCGAGACT
GGCGAGAAGCTTTTCTTGCCAGGCAGAATGTCGTTTCAAGTGCCAGGAAA
TATGGTCATTACCGGATGCATGATGCAGTTCTACCGCTCAATACCGGCGG
TTGTATTCTGGCAATGGGTGAACCAAAGCTTTAATGCCATCGTCAATTAC
TCAAACCGCAATGCCTGCCTCTGTGGCCACGGCTGTTGGATTCAACCGTC
TTATCGCTCGCAATCCGAAATTGAGCCAGGGGATGATTGGACGTTTTGTG
CCTCTACTCGCAGTGGCTGCTGCTAA back to topprotein sequence of rna3155 >rna3155-protein ID=rna3155-protein|Name=rna3155|organism=Nannochloropsis gaditana|type=polypeptide|length=525bp
MSRTSPSLPDSLPASHVRREPTSTSYEGRSPQLPLADASRAEGLDIEDVL
YSANSFWAVLKPVALTMFLASLVVVNVAFATEDQGVSVYAIDDGDADGNG
GDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSST
MLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPT
WVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRY
LVGLMQEYNEPMPGLLYEAELPGHARHHHRIPPSTALRGSERATGALASA
GSLDGGCEGDDVRLQAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLL
DGTQSSPGGTHLGQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNE
HGGESERGERGESGRGHGPSEGLSSSSHHQGGTPEQERSIKLGLGDFVFY
SVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLG
VLFYLLTRVAIIPYIDALVSTPIYV back to topmRNA from alignment at CM002460.1:863779..865447- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3155 ID=rna3155|Name=rna3155|organism=Nannochloropsis gaditana|type=mRNA|length=1669bp|location=Sequence derived from alignment at CM002460.1:863779..865447- (Nannochloropsis gaditana)
TTTATTTCCACTGACAACAGCTCATGTCGCGGACAAGTCCCTCCTTGCCC
GATTCCTTGCCTGCCAGCCATGTCCGCCGTGAACCCACATCAACATCCTA
CGAAGGTCGCTCACCCCAGCTACCCCTCGCGGACGCGTCCCGTGCAGAGG
GCCTTGACATTGAAGACGTCCTTTACTCGGCCAACTCCTTCTGGGCGGTG
CTTAAGCCTGTCGCGTTGACCATGTTTCTGGCAAGCTTGGTTGTTGTGAA
TGTGGCGTTTGCCACCGAGGATCAGGGAGTAAGCGTATACGCCATCGACG
ACGGTGACGCGGATGGCAACGGCGGAGACAGCAATTCGGTCAAGCTAGGC
AAGTCTTTGGTGAATGCCCTCACCATAGTTGGAGTCATCTGCGGCGCCAC
GTTCGTGGTAGTCCTTTTGTACAAGTTTCGATGCATGAAATGTTTGTTTG
GGTATATGGCTCTTAGCAGTACTATGTTGTTGGGCCTAATGGGCGGGTTG
CTGTGGTACACTGCTTTAATAAGGTGGGACCTGCCCTGCGACTACTTCAC
GTTTGTGATAGTTCTCTACAACTTCGCATTTGTCGGCGTGGTTGCCATCT
TCTACCAGAAAGGGATCCCAACCTGGGTCACCCAAGGTTACTTGGTCATG
ATCAGCGTCATCATGGCGTGGCAGCTATCGCGCTTCGAGGAATGGACAGG
ATGGGCCCTCCTGGTCGTCTTGGCGCTCTACGATCTATGCGCGGTCCTCA
CGCCCTGCGGACCGCTTCGGTACCTGGTGGGGCTCATGCAAGAGTACAAT
GAGCCCATGCCAGGGTTACTGTACGAGGCCGAGCTGCCCGGACATGCTCG
GCACCACCATCGAATACCCCCCTCGACCGCCTTGCGCGGAAGCGAAAGGG
CAACGGGCGCACTGGCAAGTGCAGGGAGTTTGGATGGAGGGTGCGAAGGG
GATGACGTGCGTTTGCAGGCCCCGGTTGGAGATGATGGTGCCTTCTCGCC
TGCTATGGCCTTGGGTAGTCAGGCCCACACTGTGCACAGCACCAGCCCTC
CTAGCCCTCTCGACCCTTTGCTGGACGGGACTCAGAGTAGTCCTGGAGGT
ACTCACCTCGGTCAGCACCACCCTCCTCACCCGTCCCGCAGCCTCCGTCG
GGTTTCTCGGTCACAGGGAGGGGAAACCCTCCTGGAGGATGGGATGGGGA
GCCCCGTGGAAGGTGGGAATGAGCATGGGGGCGAGTCTGAAAGGGGAGAA
AGGGGAGAAAGTGGTAGAGGCCACGGTCCATCGGAAGGTTTATCCTCCTC
TTCTCATCACCAGGGAGGGACACCGGAGCAAGAGCGATCCATCAAATTGG
GCTTGGGAGATTTCGTTTTCTATTCGGTGCTGGTCGGCAAGGCTGCTTTG
TACGGTTTTGCCACCTGTGCGGCATGCTTTCTTGTAATAATCGCGGGTCT
AGGAGCCACGCTTGTCCTCCTGAGTGTATTCCGTAAAGCTTTGCCTGCTC
TACCCATCTCTATAGGCTTGGGTGTACTTTTCTATCTGCTCACTCGAGTT
GCCATTATTCCTTACATTGATGCCTTGGTCAGCACGCCCATCTACGTCTA
AATCTGGCAAATACTATGAAGGACTTGCGCCTAGATAATAACAAAGTATC
AATATCGGAAAATTGTACA back to topCoding sequence (CDS) from alignment at CM002460.1:863779..865447- >rna3155 ID=rna3155|Name=rna3155|organism=Nannochloropsis gaditana|type=CDS|length=1578bp|location=Sequence derived from alignment at CM002460.1:863779..865447- (Nannochloropsis gaditana)
ATGTCGCGGACAAGTCCCTCCTTGCCCGATTCCTTGCCTGCCAGCCATGT
CCGCCGTGAACCCACATCAACATCCTACGAAGGTCGCTCACCCCAGCTAC
CCCTCGCGGACGCGTCCCGTGCAGAGGGCCTTGACATTGAAGACGTCCTT
TACTCGGCCAACTCCTTCTGGGCGGTGCTTAAGCCTGTCGCGTTGACCAT
GTTTCTGGCAAGCTTGGTTGTTGTGAATGTGGCGTTTGCCACCGAGGATC
AGGGAGTAAGCGTATACGCCATCGACGACGGTGACGCGGATGGCAACGGC
GGAGACAGCAATTCGGTCAAGCTAGGCAAGTCTTTGGTGAATGCCCTCAC
CATAGTTGGAGTCATCTGCGGCGCCACGTTCGTGGTAGTCCTTTTGTACA
AGTTTCGATGCATGAAATGTTTGTTTGGGTATATGGCTCTTAGCAGTACT
ATGTTGTTGGGCCTAATGGGCGGGTTGCTGTGGTACACTGCTTTAATAAG
GTGGGACCTGCCCTGCGACTACTTCACGTTTGTGATAGTTCTCTACAACT
TCGCATTTGTCGGCGTGGTTGCCATCTTCTACCAGAAAGGGATCCCAACC
TGGGTCACCCAAGGTTACTTGGTCATGATCAGCGTCATCATGGCGTGGCA
GCTATCGCGCTTCGAGGAATGGACAGGATGGGCCCTCCTGGTCGTCTTGG
CGCTCTACGATCTATGCGCGGTCCTCACGCCCTGCGGACCGCTTCGGTAC
CTGGTGGGGCTCATGCAAGAGTACAATGAGCCCATGCCAGGGTTACTGTA
CGAGGCCGAGCTGCCCGGACATGCTCGGCACCACCATCGAATACCCCCCT
CGACCGCCTTGCGCGGAAGCGAAAGGGCAACGGGCGCACTGGCAAGTGCA
GGGAGTTTGGATGGAGGGTGCGAAGGGGATGACGTGCGTTTGCAGGCCCC
GGTTGGAGATGATGGTGCCTTCTCGCCTGCTATGGCCTTGGGTAGTCAGG
CCCACACTGTGCACAGCACCAGCCCTCCTAGCCCTCTCGACCCTTTGCTG
GACGGGACTCAGAGTAGTCCTGGAGGTACTCACCTCGGTCAGCACCACCC
TCCTCACCCGTCCCGCAGCCTCCGTCGGGTTTCTCGGTCACAGGGAGGGG
AAACCCTCCTGGAGGATGGGATGGGGAGCCCCGTGGAAGGTGGGAATGAG
CATGGGGGCGAGTCTGAAAGGGGAGAAAGGGGAGAAAGTGGTAGAGGCCA
CGGTCCATCGGAAGGTTTATCCTCCTCTTCTCATCACCAGGGAGGGACAC
CGGAGCAAGAGCGATCCATCAAATTGGGCTTGGGAGATTTCGTTTTCTAT
TCGGTGCTGGTCGGCAAGGCTGCTTTGTACGGTTTTGCCACCTGTGCGGC
ATGCTTTCTTGTAATAATCGCGGGTCTAGGAGCCACGCTTGTCCTCCTGA
GTGTATTCCGTAAAGCTTTGCCTGCTCTACCCATCTCTATAGGCTTGGGT
GTACTTTTCTATCTGCTCACTCGAGTTGCCATTATTCCTTACATTGATGC
CTTGGTCAGCACGCCCATCTACGTCTAA back to top
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