EWM27520.1, cds3147 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27520.1 vs. NCBI_GenBank
Match: gi|585109786|gb|EWM27520.1| (presenilin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1060.06 bits (2740), Expect = 0.000e+0 Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 0 Query: 1 MSRTSPSLPDSLPASHVRREPTSTSYEGRSPQLPLADASRAEGLDIEDVLYSANSFWAVLKPVALTMFLASLVVVNVAFATEDQGVSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELPGHARHHHRIPPSTALRGSERATGALASAGSLDGGCEGDDVRLQAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSSPGGTHLGQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNEHGGESERGERGESGRGHGPSEGLSSSSHHQGGTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALVSTPIYV 525 MSRTSPSLPDSLPASHVRREPTSTSYEGRSPQLPLADASRAEGLDIEDVLYSANSFWAVLKPVALTMFLASLVVVNVAFATEDQGVSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELPGHARHHHRIPPSTALRGSERATGALASAGSLDGGCEGDDVRLQAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSSPGGTHLGQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNEHGGESERGERGESGRGHGPSEGLSSSSHHQGGTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALVSTPIYV Sbjct: 1 MSRTSPSLPDSLPASHVRREPTSTSYEGRSPQLPLADASRAEGLDIEDVLYSANSFWAVLKPVALTMFLASLVVVNVAFATEDQGVSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELPGHARHHHRIPPSTALRGSERATGALASAGSLDGGCEGDDVRLQAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSSPGGTHLGQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNEHGGESERGERGESGRGHGPSEGLSSSSHHQGGTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALVSTPIYV 525
BLAST of EWM27520.1 vs. NCBI_GenBank
Match: gi|1210512444|dbj|GAX28476.1| (presenilin 1 [Fistulifera solaris]) HSP 1 Score: 315.849 bits (808), Expect = 7.381e-98 Identity = 214/518 (41.31%), Postives = 291/518 (56.18%), Query Frame = 0 Query: 42 EGLDIEDVLYSANSFWAVLKPVALTMFLASLVVVNVAFATEDQG--------VSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEP-MPGLLYEAELPGHARH-----HHRIPPSTALRGSERATGALASAGSLDGGCEGDDVRL--------QAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSSPGGTHLGQ-------HHPPHPSRSLRRVSRSQGGETLLEDGMGSP-----VEGGNEHGGESERGERGESGRGHGPSEGLSSSSHHQGGTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALVSTPIYV 525 E + IE+++YS++S++A+ KPV LTM L++L VV + QG ++++D G S+ L SL NAL IV VICG TF++V+LY+ + MKCL GYM S LLG++GG + TA+ +++P D TF + +YNF VGV+A+F+ +GIPT VTQGYLV SVI+AW LS F++WT W LL++LALYDLCAVLTPCGPL++LV M + P MPGLL+EAELP A+ R + + ER+ + +DG E V++ Q PV + S ++ ++ T+ SPL D T P Q P H R L V R L D G P V+ + E + G+ + PE+ SI+LGLGDF+FYSVLV KAA Y FAT AAC LVI+AGLG TLVLLSV+ ALPALPISI +G++FY+LTR I P+++A++ P YV Sbjct: 60 EQMTIEELIYSSSSYYAIAKPVTLTMVLSALAVVLINDDATKQGNEAAMANAYQYFSVNDA------GQSSGQNLAHSLANALIIVSVICGMTFMIVVLYRMKFMKCLIGYMIFCSGTLLGMLGGNVLQTAVQVYNIPVDKGTFYLFVYNFCIVGVLAVFFGQGIPTSVTQGYLVATSVILAWHLSFFDDWTAWTLLLMLALYDLCAVLTPCGPLKFLVEAMSQEGSPEMPGLLFEAELPPEAKRPVGSSRGRANIAASASDVERSAPPNPVSQPMDGSSESPRVKIPLAIAKVYQLPVVSIPSSSMSIMFPDRSSDTIGTT--SPLLTNSDSTVILPENPTAEQLLAKVVVRLPAHGGR-LEHVQRRGKKVYLERDRHGVPKRYLWVDRNGKVFAEMKDGDEEK---------------------PEKN-SIRLGLGDFIFYSVLVAKAAQYSFATFAACILVILAGLGGTLVLLSVYHHALPALPISIFMGIVFYVLTRWFIEPWVEAVLEKPYYV 546
BLAST of EWM27520.1 vs. NCBI_GenBank
Match: gi|673018012|ref|XP_008862967.1| (hypothetical protein H310_01595 [Aphanomyces invadans] >gi|574482170|gb|ETW09162.1| hypothetical protein H310_01595 [Aphanomyces invadans]) HSP 1 Score: 308.531 bits (789), Expect = 3.580e-96 Identity = 200/491 (40.73%), Postives = 263/491 (53.56%), Query Frame = 0 Query: 37 DASRAEGLDIEDVLYSANSFWAVLKPVALTMFLASLVVVNV----AFATEDQGVSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELPGHARHHHRIPPSTALRGS----ERATGALASAGSLDGGCEGDDVRLQAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSSPGGTHLGQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNEHGGESERGERGESGRGHGPSEGLSSSSHHQGGTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALV 519 D + +DIED+++S SF AVL PV LTM L+S + + A A Q VY DD D+D S LG + VNAL IV ATFV+V+ YKF+ L GYM LSS +LLG +GG L AL +P D +++ ++YNFA VGV++IFYQKG+ +TQ YLV +S+IMAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPL+ LV L+Q+ P+PGLLYEAE+ H PS RG E+ATG + DD + P +A S T T+ T P L + + ++ RV D + + EG ER + +GP + E + +IKLGLGDFVFYSVLV +AA++ AC + I+ GLG+TL LLSV++KALPALPISI LGV YL R ++ ++D+ V Sbjct: 22 DTQESPEVDIEDLMHSLGSFQAVLLPVTLTMVLSSFASILIRDPDAAAQMAQAYLVYKPDDSDSD-------SALLGHAFVNALAIVCFFIVATFVIVICYKFKFTNFLVGYMFLSSAVLLGFLGGRLAEVALENLSVPVDVWSYWFIMYNFAVVGVLSIFYQKGVNMSLTQSYLVAVSIIMAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQQEGRPLPGLLYEAEV-QRTFHSDAHSPSYYQRGGPPCPEQATGTQTTCTFTRRRSRPDD-----------SHEPLLAAASSTDTSEMTT-----------TAKLPLRDRLVAFYNEYNPSAIERV-----------DQVLAIYEG-------RERDLWNDLAAKYGPHDD-----------DEDDNTIKLGLGDFVFYSVLVSRAAMFDVMAMIACLVSILMGLGSTLFLLSVYKKALPALPISILLGVAIYLWVRFVLVDFMDSTV 453
BLAST of EWM27520.1 vs. NCBI_GenBank
Match: gi|673018014|ref|XP_008862968.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574482171|gb|ETW09163.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 308.145 bits (788), Expect = 4.619e-96 Identity = 200/491 (40.73%), Postives = 263/491 (53.56%), Query Frame = 0 Query: 37 DASRAEGLDIEDVLYSANSFWAVLKPVALTMFLASLVVVNV----AFATEDQGVSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELPGHARHHHRIPPSTALRGS----ERATGALASAGSLDGGCEGDDVRLQAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSSPGGTHLGQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNEHGGESERGERGESGRGHGPSEGLSSSSHHQGGTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALV 519 D + +DIED+++S SF AVL PV LTM L+S + + A A Q VY DD D+D S LG + VNAL IV ATFV+V+ YKF+ L GYM LSS +LLG +GG L AL +P D +++ ++YNFA VGV++IFYQKG+ +TQ YLV +S+IMAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPL+ LV L+Q+ P+PGLLYEAE+ H PS RG E+ATG + DD + P +A S T T+ T P L + + ++ RV D + + EG ER + +GP + E + +IKLGLGDFVFYSVLV +AA++ AC + I+ GLG+TL LLSV++KALPALPISI LGV YL R ++ ++D+ V Sbjct: 14 DTQESPEVDIEDLMHSLGSFQAVLLPVTLTMVLSSFASILIRDPDAAAQMAQAYLVYKPDDSDSD-------SALLGHAFVNALAIVCFFIVATFVIVICYKFKFTNFLVGYMFLSSAVLLGFLGGRLAEVALENLSVPVDVWSYWFIMYNFAVVGVLSIFYQKGVNMSLTQSYLVAVSIIMAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQQEGRPLPGLLYEAEV-QRTFHSDAHSPSYYQRGGPPCPEQATGTQTTCTFTRRRSRPDD-----------SHEPLLAAASSTDTSEMTT-----------TAKLPLRDRLVAFYNEYNPSAIERV-----------DQVLAIYEG-------RERDLWNDLAAKYGPHDD-----------DEDDNTIKLGLGDFVFYSVLVSRAAMFDVMAMIACLVSILMGLGSTLFLLSVYKKALPALPISILLGVAIYLWVRFVLVDFMDSTV 445
BLAST of EWM27520.1 vs. NCBI_GenBank
Match: gi|673020622|ref|XP_008864272.1| (hypothetical protein H310_02517 [Aphanomyces invadans] >gi|574479203|gb|ETW06197.1| hypothetical protein H310_02517 [Aphanomyces invadans]) HSP 1 Score: 300.056 bits (767), Expect = 7.446e-92 Identity = 189/519 (36.42%), Postives = 268/519 (51.64%), Query Frame = 0 Query: 21 PTSTSYEGRSPQLP---LADASRAEGLDIEDVLYSANSFWAVLKPVALTMFLASLVVVNVAFATEDQGVSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTA---LIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELP---GHARHHHRIPPSTALRGSERATGALASAGSLDGGCEGDDVRLQAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQ-SSPGGTHLGQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNEHGGES--ERGERGESGRGHGPSE-----GLSSSSHHQGGTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALVSTP 522 P S+ + G +P AD + ED+++ NSFWAV+ PV +TM +AS+ VVN ++ + Y + + + G D+ V +G SLVNAL ++G + G TF + LLYKF CM+ L GY+ SS+ +LG +GG L T + W P D+ +F+ ++ NF+FVGVVAIFYQKG+ W+ YLV++SVI+AWQ S + EWT W ++ A YDLCAVLTPCGPL+ L+ L+QE PMPGLLYEAE+ G+A H+ + A R ++ +SA P + P PP+ + P LDG ++P H + +R +T D + + S + G P L + + + +++IKLGLGDF+FYSVLVG+AA++ F TC CF+ I+ GLG TL LLSV KALPALPISI L FY R + + + S P Sbjct: 54 PASSDHPGDAPTSAPHVSADEQQEREETAEDLMHGINSFWAVVWPVCVTMVIASVAVVNCRSRALERSMGSYLVYN---EVQGADAGQV-VGHSLVNALVVIGFVTGLTFFMALLYKFNCMRILVGYIMFSSSAILGFVGGQLVDTVNDTYLHW--PIDWVSFLFIMVNFSFVGVVAIFYQKGVAKWIQNTYLVLVSVILAWQFSMWPEWTTWIFCIMFACYDLCAVLTPCGPLKVLINLIQEKQAPMPGLLYEAEVRDGVGNAAAHNSSATAPAPRRPPTSSSGPSSAAR--------------PPREPRQIDP---------------PPTAVPPSLDGVDLTAPFDVHDCATEDEFKALLFAFYARYSPDDTWKVDQVAARFFANQPRMWPSLFHKYMVCSCGTDGVPCSVQIAIDLRNQQQRRDHDDDDDKTIKLGLGDFIFYSVLVGRAAIFDFTTCVICFVCILMGLGGTLFLLSVLHKALPALPISIFLATAFYFWARYTLTAFCTFVTSVP 537
BLAST of EWM27520.1 vs. NCBI_GenBank
Match: gi|299117501|emb|CBN74004.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 294.278 bits (752), Expect = 3.708e-89 Identity = 150/232 (64.66%), Postives = 174/232 (75.00%), Query Frame = 0 Query: 43 GLDIEDVLYSANSFWAVLKPVALTMFLASLVVVNV---AFATEDQGVSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAEL 271 LD DV YSANSF AV+KPV L M L++ + V++ A + +SVY + D D +SV+LGKS VNAL IV V+ ATFV+V +Y RCM+CL GYMA+SS +LLG+MGG +W AL + LPCD FT+ VL+NFA VGVVAIFYQKGIPT VTQ YLV S+IMAWQLSRFEEWTGW LLVVLALYDLCAVLTPCGPL+ LV LMQEY EPMPGLLYEAEL Sbjct: 56 ALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDEST--TTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAEL 285 HSP 2 Score: 129.413 bits (324), Expect = 2.396e-28 Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 0 Query: 439 SIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALVSTPIY 524 SIKLGLGDFVFYSVLV KAALYGF AAC +VI+ GLGATLVLL+V+R ALPALPISIG G +FYLLTR +I PY++AL TP+Y Sbjct: 496 SIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNETPLY 581
BLAST of EWM27520.1 vs. NCBI_GenBank
Match: gi|813119216|ref|XP_012196195.1| (hypothetical protein SPRG_02256 [Saprolegnia parasitica CBS 223.65] >gi|641539640|gb|KDO33449.1| hypothetical protein SPRG_02256 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 288.886 bits (738), Expect = 1.693e-88 Identity = 201/481 (41.79%), Postives = 261/481 (54.26%), Query Frame = 0 Query: 40 RAEGLDIEDVLYSANSFWAVLKPVALTMFLASLV-VVNVAFATEDQGVSVYAI---DDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELPGHARHHHRIPPSTALRGSERATGALASAGSLDGGCEGDDVRLQAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSSPGGTHLGQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNEHGGESERGERGESGRGHGPSEGLSSSSHHQGGTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYID 516 A +D+ D+L+S SF AVL PV +TM L+SL V T DQ Y + +DG++DG+ LG ++VNAL IVGV ATFV+V YKF+ L GYM SS +LLG++GG L L R D+ D ++ IV+YNFA VGV++IFYQKG+P VTQ YLV +SVIMAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPL+ LV L+Q P+PGLLYEAE+ R H P G + A A+ S C R + DD +L ++A T PP L P + L + + +L RV D + + E G G+ R GL + E++ +IKLGLGDFVFYSVLV +AALY + AC + I+ GLG TL LL + ++ALPALPISI LGV Y R + +++ Sbjct: 21 EAGSIDVHDILHSLGSFRAVLLPVTMTMLLSSLASAVLTDPETADQIAHAYLVYLPEDGESDGS-------LLGHAIVNALAIVGVFVIATFVIVFCYKFQFTNFLVGYMFFSSAVLLGVLGGHLATVLLERLDVAVDILSWSIVMYNFAIVGVLSIFYQKGLPMSVTQSYLVAVSVIMAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQSEGRPLPGLLYEAEV--QTRFDHTEPKYYQHGGPLPSVTATATTAS--DVCSFARRRSKPQDEDDD------SLETEAQTEPLLPPPVVLKP------KTSVRDRLVAFYTAYNPDALDRV-----------DSILAMYE-----------GREGDLWRDLERKYGLDTDD-------EEDNTIKLGLGDFVFYSVLVSRAALYDVSAMWACAVAILMGLGGTLFLLGIHKQALPALPISILLGVAVYFWMRCVLFDFMN 449
BLAST of EWM27520.1 vs. NCBI_GenBank
Match: gi|669159372|ref|XP_008615248.1| (hypothetical protein SDRG_11008 [Saprolegnia diclina VS20] >gi|530733165|gb|EQC31407.1| hypothetical protein SDRG_11008 [Saprolegnia diclina VS20]) HSP 1 Score: 285.419 bits (729), Expect = 3.815e-87 Identity = 199/482 (41.29%), Postives = 260/482 (53.94%), Query Frame = 0 Query: 40 RAEGLDIEDVLYSANSFWAVLKPVALTMFLASLV-VVNVAFATEDQGVSVYAI---DDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELPGHARHHHRIPPSTALRGSERATGALASAGSLDGGCEGDDVRLQAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSSPG-GTHLGQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNEHGGESERGERGESGRGHGPSEGLSSSSHHQGGTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYID 516 A +D+ D+L+S SF AVL PV +TM L+SL V T DQ Y + +DG++DG+ LG ++VNAL IVGV ATFV+V YKF+ L GYM SS +LLG++GG L L R D+ D ++ IV+YNFA VGV++IFYQKG+P VTQ YLV +SVIMAWQLS+F EWT WAL+VVLA YDLCAVLTPCGPL+ LV L+Q P+PGLLYEAE+ R H P G A +A + R P +D +L +A T PP P+ + P L + + +L R+ D + + E G G+ R GL + E++ +IKLGLGDFVFYSVLV +AALY A AC + I+ GLG TL LL + ++ALPALPISI LGV Y+ R + +++ Sbjct: 21 EAGAIDVHDILHSLGSFRAVLLPVTMTMLLSSLASAVLTDPETADQIAHAYLVYLPEDGESDGS-------LLGHAIVNALAIVGVFVIATFVIVFCYKFQFTNFLVGYMFFSSAVLLGILGGHLATVLLERLDVAVDILSWSIVMYNFAIVGVLSIFYQKGLPMSVTQSYLVAVSVIMAWQLSKFPEWTTWALVVVLAFYDLCAVLTPCGPLKCLVNLIQSEGRPLPGLLYEAEV--QTRFDHSEPNYYQHGGPLPAITTTTTASDVCSFAR----RRSKPQDEDEE-----SLEKEAQT-EPLLPPQPV-----AKKPKPSVRDRLVAFYTAYNPDALSRI-----------DNILAMYE-----------GREGDLWRDLERKYGLDTDD-------EEDNTIKLGLGDFVFYSVLVSRAALYDVAAMWACAVAILVGLGGTLFLLGIHKQALPALPISILLGVAVYVWMRCVLFEFMN 449
BLAST of EWM27520.1 vs. NCBI_GenBank
Match: gi|1210531819|dbj|GAX09612.1| (presenilin 1 [Fistulifera solaris]) HSP 1 Score: 299.671 bits (766), Expect = 1.314e-86 Identity = 208/504 (41.27%), Postives = 283/504 (56.15%), Query Frame = 0 Query: 38 ASRAEGLDIEDVLYSANSFWAVLKPVALTMFLASLVVVNVAFATEDQG--------VSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEP-MPGLLYEAELPGHARH-----HHRIPPSTALRGSERATGALASAGSLDGGCEGDDVRL--------QAPVGDDGAFSPAMAL-GSQAHTVHSTSPPSPLDPLLDGTQSSPGGTHLGQHHPPHPSRSLRRVSRSQGGETLLEDGMGS-PVEGGN-EHGGES------ERGERGESGRGHGPSEGLSSSSHHQGGTPE--QERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTR 508 +S E + +E+++YS++S++A+ KPV LTM L++L VV + QG ++++D G S+ L SL NAL IV ICG TF++V+LY+ + MKCL GYM S LLG++GG + TA+ +++P D TF + LYNF VGV+A+F+ +GIPT VTQGYLV SVI+AW LS F++WT W LL++LALYDLCAVLTPCGPL++LV M + P MPGLL+EAELP A+ R + + ER+ + + DG E V++ Q PV + S ++ + T+ +TS PLL + S+ P +PS E LL + P GG EH ER G R + + G E ++ SI+LGLGDF+FYSVLV KAA Y FAT AAC LVI+AGLG TLVLLSV+ ALPALPISI +G++FY+ TR Sbjct: 55 SSEGEQMTVEELIYSSSSYYAIAKPVTLTMVLSALAVVLINDDATKQGNEAAMASAYQYFSVNDA------GQSSGQNLAYSLANALIIVSAICGMTFMIVVLYRMKFMKCLIGYMIFCSGTLLGMLGGNVLQTAVQVYNIPIDKGTFYLFLYNFCIVGVLAVFFGQGIPTTVTQGYLVATSVILAWHLSFFDDWTAWTLLLMLALYDLCAVLTPCGPLKFLVEAMSQEGSPEMPGLLFEAELPPEAKRPGGSSRGRANIAASASDVERSAPSNPISQPTDGLSESPRVKIPLAIAKVYQLPVVSIPSSSMSIMFPDRNSDTIGTTS------PLLTNSDSTII-------LPDNPS-----------AEQLLAKVVVRLPAHGGRLEHVQRRGKKVYLERDRHGVPKRYLWVDRNGKVFAEMKDGDEEKPEKNSIRLGLGDFIFYSVLVAKAAQYSFATFAACILVILAGLGGTLVLLSVYHHALPALPISIFMGIVFYVFTR 528
BLAST of EWM27520.1 vs. NCBI_GenBank
Match: gi|567954192|gb|ETK79830.1| (hypothetical protein L915_14322 [Phytophthora parasitica] >gi|567982846|gb|ETL33249.1| hypothetical protein L916_14227 [Phytophthora parasitica] >gi|568012358|gb|ETL86536.1| hypothetical protein L917_14018 [Phytophthora parasitica] >gi|568042370|gb|ETM39701.1| hypothetical protein L914_14144 [Phytophthora parasitica] >gi|570320495|gb|ETO68443.1| hypothetical protein F444_14706 [Phytophthora parasitica P1976] >gi|570944317|gb|ETP09574.1| hypothetical protein F441_14560 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 277.33 bits (708), Expect = 3.273e-84 Identity = 194/505 (38.42%), Postives = 264/505 (52.28%), Query Frame = 0 Query: 12 LPASHVRREPTSTSYEGRSPQLPLADASRAEGLDIEDVLYSANSFWAVLKPVALTMFLASLVVVNVAFATEDQGVS-VYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELPGHARHHHRIPPSTALRGSERATGALASAGSLDGGCEGD-DVRLQAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSSPGGTHLGQHHPPHPSRSLRRVSRSQGGETLLEDGMGSPVEGGNEHGGESERGERGESGRGHGPSEGLSSSSHHQGGTPEQERSIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPY 514 LPA R TS Y+G + E++L+S SF AV+ PVA+TM LAS V +NV + ++ Y I D D G S K+ +LVNAL IV ATFV+V YKF + L GYM SS MLLG++GG + + ++++P D FT + +YNF+ VGV++IFYQKG P W+TQ YLV SVIMAWQL +F EW+ WAL++VLA YDLCAVLTPCGPL++LV L+Q+ P+PGLLYEAE+ R +H + +R ++ CE + +RL +P D P S HT + L++ +H+P SR + + R G ET L + +++GE E +IKLGLGDFVFYSVLV +AA Y F+ C + ++ GLG TL LL +++KALPALPISI L V+ Y RV + + Sbjct: 17 LPA---RPRQTSQDYDGE------------DAFTHEELLHSIGSFSAVVWPVAVTMLLASFVSLNVEDPASAKALAEAYLIYGPDQDK--GASTGTKMTDALVNALAIVSFFLVATFVIVCCYKFNFNRILIGYMMFSSAMLLGMLGGNMLVIVIAKFEIPIDVFTLLFAMYNFSVVGVLSIFYQKGTPMWLTQTYLVATSVIMAWQLGQFPEWSTWALVIVLAFYDLCAVLTPCGPLKWLVNLVQQEGRPLPGLLYEAEI----RRNHSGHTAQPVR------------ENVYYQCESEIPLRLGSP--RDVPEGPT----SSTHTSLTPRQAQLRARLIE---------FYSKHNPSAISRVDKILERYHGRETELWHDL--------YQKYVTDQGEVDE--------------------------TIKLGLGDFVFYSVLVSRAAKYDFSAMIGCLVSVLMGLGGTLFLLGIYQKALPALPISILLAVMMYFWLRVVFVDF 439 The following BLAST results are available for this feature:
BLAST of EWM27520.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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