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Properties
Property Name | Value |
Product | citrate synthase |
Orig transcript id | gnl|cribi|Naga_100015g11.6365.mrna |
Orig protein id | gnl|cribi|Naga_100015g11.6365 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002460.1 | supercontig | CM002460.1:835055..837674 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3143 ID=rna3143|Name=rna3143|organism=Nannochloropsis gaditana|type=mRNA|length=3341bp AGCGGAATACGGCGGCTGAAGGGCCATCGCTACGAGGGCTCCACGTTTGG ATTTTGTGGCATGGGTCTCGATGTCAATCGGATTGAAATGGAGAGGTGTC TCAGTGTTGGCTTGATTTTTTTATTGGTGTTGTGCAAAGGAATTCAACAC GCGTTTTCTCTTCCTTGAGACGAGCGAGCGAGGAGGCGGATCCTCTCAAG CAAGCCTTGGGTTCATGTCGTTATACGCATATCACAAAGTCTTTCGAGCA CAAGTTCTCGTTCAGGTCTCATCTTTCACAGATAAACGAACTTTACATAG GTAATATCAGGGGCAAAAGGAAGATGGCTGGTCTCTTGTGAGTCCACCAT TCTCTGCTCACGTTTTGAGGAGCCTGCGGCCACCTAGCACGCCCAGCTTA AAGCTCGTGCTCGGCGCCCTCAAGACGTCAGAAGAGACAGTTTTTTTGTC AAATCACAGACAAAGACGATAGGCAAGCGTTCAGCTTCAAGACTTTGGAC GCAGTGTGGACATCGCGTCTAAGTGTGTGCATACTTATTTGTTGATATTT GCTCGGACCGGAGCCGATCCGCAGCCTGTAAACAACCACCAAATCAGTGA GAAAATAGAGCCAGATACTTGCACGGGGCCAAGATGGGGGACTTATTGGT CGTGCACCGTTTGTGCCTGTGATTGCCCAGATTTGGCTTTCTTACTCTTA AGGCAATACTCCTCTCCGAGTGCTGTCTCTCTCTCCAGTCTATAATTCGG CCATCGGTTCGTAAGATTCCCCCGTATCGCTGTTCGTAAGGAATGGAGGG ATCCTCAAAACGATGGAATAGCAAGCATCAGCTCCATACACAACAACAAT TTTTTTCACGATCTCCCTCGCCATCGTTGAGCAACACCAGCAACAACAGT CCTTTCGCAGATGCTGTCCTTCACCAACAGCAACTTAATCAGCATTCACA CCCTGATGACCCGCTCCACTACTCTCAACGTTCCCGTGCTGAAGTCTCTC GCATCCCCATCGATGCGGTTGCGGGGCCATCTGCCGGCGGTGCGGCCTTT GGGGACGATTATCCGTTGCATCGGTCGGTCATGGCAGTCTCACGAGGCGG GCACAGTGCCGTGGGCAATAACCAAGGAGGTGTTGAGGTGGTCGCGCCGC CCGCCCTCCCGTTCCTCCCGGCCTCGACCGCTACGCCATTCTCTGCAGCT TACTTCGGCGGAGCGCGATACTCTCCCACGGGATTGCCCCTGGCAGACCT AGCTCCCTTAAAGTTTATCAAGGACGAGAGCAGTGCGAATCGGTACAGCA CGGGTAGCAGCAGCGGAAGCATCAGCATCAGCGGTAATAGCCTCGCGTCA GTTTCGCCGTCGGTCATGCGTGGTGAGGTGGAAGATGGAGTCGGTGTCAA GACTTTTCTCTCTATGTCGAATGGCAACAGCAGCACTGCCATGTTGGAGT GGCGCAGCGTGCCAGCCCTGCCTTTATATTTGGAACCCAATAACCATGCC ATGCTGGCCCCTGTCGTAGAGGCGAAGTCTGACACAGAGAAAATGAAGTT CCTGGCTTCGATCATGAAACTGGTGGAGCGGACTTTCGCTCGCTGTCAGG TCGACTATGTCTTCAAGGCTGACAAGTGTAAATGGAAAGCAGCCCGTCAC CGGGCCATGTCTCGCGTGGACTTTCGCTGCCGTGTGTATCGCGAAGGCGG CACCAATACAGGATTGGTGGTGGAATTCCAGAAGCGCTTGGGTGACTATT TCTTGATGCGGGATGTCATGGAGAGTTTCTTGGCGGGCGCGGAACAGGCG GGTCTCGTCCGCGTCACGGGAGGACATGGAAGCGGAGAAAGTCAGGGCAG CCTCGATCACACTAACACTCCAAGCGAGCATGCGGTTTTCGCTTCGACTG ATCCCTTCCAAAATTTGGGAGGTAGTGGTAGTGCTGCTAATTTCCTGTCT CCGCCCAGCTTCGGGCGCTCCTTCACTGCCAGCGCCAATGAATCCTTGTT GCACACTAAGTCCTCCGGCATGAGTGCTGACTCTAACGTTGCTTCGCCTG TTCATTCAGACCCTGTAGCGTACGCATCCGATAGTGCCGTCCTCGCCCCA CTCCTAGAAATGGCCACGGGTGATTGCGACTTGGCCCGCCTGGAAGGTGT CCTTGGTCTCGCCAAGCTGTCGGTGCTGGAAGACAACCGGGCTGTGCTGA AGGACGCGGGGGCGATTCCTATCTTGGTATCTATCATCAAACACATGCAT ATCGAGCCGGCGGTACGACAAGCGGCGGTGACCGCTCTCTCCAACTTGTC TGAGAGCGCCTCTTGCAAGCATCCCTTGGTAGAGGCGGGGGTGGTGCGTA GCCTTCTGCGTTTGGCGGAGCAGACTACGAAGAAGGGTGCGGTCCAGAAA AGTGGGTGTCATCAGTCGTCCTCGGCTTCCTCCACCGGTTCCATGGCATC TTCTTGGAATGTCCTTGTTTCGAGATGTCTGTACATGGATTTGGAAATTG GGAGAGAAAGCGCGCGGACCCTGGCGAATCTTTCTGAGGAGCACGCGGCC GTCATGATAAGGGATCTTGGCCGGGATGGGGTGAAGGAGTTCCTGAAATC GGTCGACAGTGTGGAGGACGAAAGACTGCGCATGCATGCCCGGCGATTTA AGACCCGCATGGGCCAAGTCGTGTGTTGACGGAGGAACGCAAGGCGTGGG CACGTGTGATGTGTTTTGCATGAGGACAGGAAGGAAGACAAGCAGTTAAA TGGACATGAAAAGCAAGGGAGCTTTGGAAGCGTGAAAGAAATGAGCCGAA GAATGAAAGGACAGAGAGTTGCGACGACGAGGATCACCGCATAGAAGTAA GATCATGATGTTGGAGGGCGGCACAGGCATATCTTGACGAAATAGGGACA GGAAAAGGCAAGGGAAACGCAGAGCGAAATGCTGACAAGCATACATGATC AATGTCGTGTATATAAGCTTGGATGGCGTCTGGAGTCATGGTTACGGGAA GGAAAGACTGCAAAATTACAAGGACATCTTAAGTGGTACAAACACATAGC CTGTGCACGGCCACACCCAATTATTGACCTGTATTGGTTTCTGTCTCGTA CTTTCCGTCCCTATCGGCTGGAGGACCGCGAAGTGTGCCCTATGAAGTGT GATTCCTGGTGGAGTAGGATGTCTGAATGATCCCTAGTCTGCTGATACGA ACTCCGTCGCATTAAAAGTCAGGGAAGTGAAAAGCAGGTATGAAGACATG CACAGTGAATAGAACGAATCGGAGAAAACGGTGCACATGTTCGAAACAAC AATGGGAAGAATCAAATTTCGCTTATTTCGCAAATTTACGG back to topprotein sequence of rna3143 >rna3143-protein ID=rna3143-protein|Name=rna3143|organism=Nannochloropsis gaditana|type=polypeptide|length=467bp MITHMSRRLRNTVAPSMKSLATRGMASIQETLTELVPVKQAELVALKKEH GHKVIGDVTVDQCIGGGRDIKSLFWETSLLDAQEGIRFRGYSIPELQQKL PTFKGPAGQGEPTPEALVWLMLTDTIPTKAEADSLTHELYKRSEIPQHVV ALLKSLPKSLHPMSQLVVGLMALQKDSKFAAAYASGVHKKEYWKHTLEDI LDVWAKLPELAALVFSNTYKDGSVGSKDPSLDYSANFARRLGYNKPEFDE LMRLYLVIHSDHEGGNASAHTTHLVGSTLSDPYLSYSAGLNALAGPLHGL ANQEVLGWILDLQKKFKAEGKPVNKETITQFAWETLKSGKVIPGYGHAVL RKTDPRYTSQREFALKYLPDDELFKIVGTIYEVVPDVLTEHGKTKNPYPN VDSHSGVLLWHYGFKEFNYYTVLFGVSRALGALSQVFWDRALGMPLERPK SVTSKWILEHVNNSKSQ back to topmRNA from alignment at CM002460.1:835055..837674- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3143 ID=rna3143|Name=rna3143|organism=Nannochloropsis gaditana|type=mRNA|length=2620bp|location=Sequence derived from alignment at CM002460.1:835055..837674- (Nannochloropsis gaditana) GGGTGGCCCCTTGCCTTGCCCGCTTGGGGTGGTGCACGGAGATTCAGCAC
GGTGTTCACAGACGCGGTGGCCGCGGGAAGGCGTCACGTGCTGTGTTTAG
GTCTTTTCGTGTCGGTTACGGCATGTGCCGTGAGGGAGGAGGAATTCCAG
CACTTCGAGAGGGAGATACCCTCGCTCCGCCGCCGCAATGCCCGAACCGA
CCATAAAACCCAAACTTGCACGGCTCACCGCTCGCGATCGTTGAATGTGA
CCGCAGAGATGATGTTTAAAGGTCGACCAGGACCCTTTTTGCGTGTCAAT
GTGCCCACTTTGTCCCCGTAATCAAGGCTTCTCTTGCAACAGACTTTCTC
CGCCTCCGTATTCAACAGACTCGCAGCAGCACGCAGCAAACAACGGTCAC
CATGATCACGCATATGTCCCGTCGCCTCCGCAATACCGTGGCTCCATCCA
TGAAGGTAGGCTTCTCATAGTTGGGTGGGAAAAAATAAAAAAAAGCAACT
TTCACGGGTCCGGGGCTATCGATTTGCTTTGTGCAGGGTATGTTGCGGAG
GCTCATTCCCATCCGGAACGCTTCAAATGTCCTCCTCTTTCTTCGTGCCG
GGAGTCATATGCCTTCCGCTTCTTGATAGCGAAGGGAGTAAAGCTCTAAT
TGGATTTTCCCTCTCACACCGGAGCCGGAAAATCGATGATTCTTCTCATA
TTCATATGTAGTTCCCGGGCGGCTTGCTCTCTATCTCGACTTCCCTGTTC
TGTCATGACGTGCCTCCGAAGATGCGTTGATTCATATTCTGTTTTGACCT
TGACCTCCCCTCACTCCCAATTCTCTGTTTTGCTGCAGTCACTGGCCACG
CGGGGTATGGCATCCATTCAGGAGACCCTCACGGAGCTTGTGCCCGTCAA
GCAAGCCGAGCTCGTCGCTCTGAAAAAAGAGCACGGACACAAGGTCATCG
GCGATGTAACCGTGGATCAATGCATTGGGGGCGGGCGAGACATCAAGTCT
CTTTTCTGGGAAACTTCGCTCCTGGACGCGCAAGAGGGCATCCGCTTCCG
AGGCTATTCGATCCCGGAGCTGCAGCAGAAGCTCCCCACCTTCAAAGGGC
CTGCCGGACAGGGAGAACCCACCCCAGAGGCCTTGGTCTGGCTGATGCTC
ACAGACACGATCCCTACCAAGGCAGAAGCGGACTCCTTGACGCATGAGCT
TTACAAGCGTTCCGAGATCCCCCAGCACGTGGTCGCGCTCCTCAAGTCCT
TGCCCAAGTCGCTCCACCCGATGAGCCAGTTGGTCGTGGGCCTCATGGCT
CTGCAGAAGGACAGCAAATTCGCGGCGGCCTACGCGAGCGGCGTTCACAA
GAAGGAATATTGGAAGCACACGCTGGAAGACATCCTGGACGTATGGGCCA
AGCTGCCAGAGCTCGCAGCTTTGGTGTTCAGCAACACGTACAAAGACGGG
TCTGTCGGGAGCAAGGATCCTTCCCTGGACTACTCCGCCAATTTCGCCCG
GCGTCTGGGCTACAATAAACCCGAGTTCGACGAGCTCATGCGCCTGTACC
TCGTCATCCATTCCGATCACGAGGGAGGGAATGCCTCGGCGCATACCACT
CACCTGGTCGGCTCGACCCTCTCCGACCCCTACCTGTCCTACTCGGCGGG
CCTCAATGCCTTGGCGGGCCCCCTGCATGGACTGGCCAATCAGGAAGTGC
TTGGGTGGATATTGGACCTGCAAAAGAAATTCAAAGCGGAGGGGAAGCCT
GTGAACAAGGAGACCATCACGCAGTTCGCATGGGAGACACTCAAGTCGGG
CAAGGTCATCCCGGGCTACGGCCACGCCGTGCTTCGGAAAACCGATCCCC
GCTACACCTCTCAGCGAGAGTTTGCCTTGAAATACTTGCCGGATGACGAA
CTCTTCAAGATTGTGGGCACGATCTACGAGGTGGTCCCGGACGTGTTGAC
GGAGCACGGGAAGACCAAGAACCCCTACCCGAACGTGGACTCCCACTCTG
GCGTCTTGCTCTGGCACTACGGCTTCAAAGAGTTCAACTACTACACGGTA
TTGTTTGGAGTTTCGCGGGCCTTGGGAGCCTTGTCGCAGGTGTTTTGGGA
CCGGGCTCTGGGGATGCCTCTGGAGCGACCGAAGTCTGTCACCTCTAAGT
GGATCCTGGAGCATGTGAACAACAGCAAAAGTCAGTAAAGCCGGCACAAG
AGCGCTTTCTTGGCTCGCATCCAGCTACGCGGGCATGGACCGGGCGAAGG
GATGGGAAAAACTGATCCAATAAAGGACTACAAGCCAGGTATGGTGAAAG
ACGGATGGGAGAGCGTGTTTTTCGACACGGAGGAGCATTGGCAGCTCGGG
GAAAGAAGCAGGGCGGCTTGTGGGGGGAATCCATCGGTCAATTTTGGCGG
TTTGAAACCTTTAAGGTATGATTCCTGTGATGATCGCAGCCGCGGGAGTA
GAACAGCAGCATGCAAAAATAATCCGCTTGATGGAGAGAAGACGAAGAGA
AGGGAATGGAAATATCCAGAGGTGTACTGTCAAGACTCGCGTCTCATTTT
TAAGCTGGTTCACGAAAGAAATAGGAATTGAACAAATTCCCGTGCGTCCG
TAAATTTGCGAAATAAGCGA back to topCoding sequence (CDS) from alignment at CM002460.1:835055..837674- >rna3143 ID=rna3143|Name=rna3143|organism=Nannochloropsis gaditana|type=CDS|length=2808bp|location=Sequence derived from alignment at CM002460.1:835055..837674- (Nannochloropsis gaditana) TCACTGGCCACGCGGGGTATGGCATCCATTCAGGAGACCCTCACGGAGCT TGTGCCCGTCAAGCAAGCCGAGCTCGTCGCTCTGAAAAAAGAGCACGGAC ACAAGGTCATCGGCGATGTAACCGTGGATCAATGCATTGGGGGCGGGCGA GACATCAAGTCTCTTTTCTGGGAAACTTCGCTCCTGGACGCGCAAGAGGG CATCCGCTTCCGAGGCTATTCGATCCCGGAGCTGCAGCAGAAGCTCCCCA CCTTCAAAGGGCCTGCCGGACAGGGAGAACCCACCCCAGAGGCCTTGGTC TGGCTGATGCTCACAGACACGATCCCTACCAAGGCAGAAGCGGACTCCTT GACGCATGAGCTTTACAAGCGTTCCGAGATCCCCCAGCACGTGGTCGCGC TCCTCAAGTCCTTGCCCAAGTCGCTCCACCCGATGAGCCAGTTGGTCGTG GGCCTCATGGCTCTGCAGAAGGACAGCAAATTCGCGGCGGCCTACGCGAG CGGCGTTCACAAGAAGGAATATTGGAAGCACACGCTGGAAGACATCCTGG ACGTATGGGCCAAGCTGCCAGAGCTCGCAGCTTTGGTGTTCAGCAACACG TACAAAGACGGGTCTGTCGGGAGCAAGGATCCTTCCCTGGACTACTCCGC CAATTTCGCCCGGCGTCTGGGCTACAATAAACCCGAGTTCGACGAGCTCA TGCGCCTGTACCTCGTCATCCATTCCGATCACGAGGGAGGGAATGCCTCG GCGCATACCACTCACCTGGTCGGCTCGACCCTCTCCGACCCCTACCTGTC CTACTCGGCGGGCCTCAATGCCTTGGCGGGCCCCCTGCATGGACTGGCCA ATCAGGAAGTGCTTGGGTGGATATTGGACCTGCAAAAGAAATTCAAAGCG GAGGGGAAGCCTGTGAACAAGGAGACCATCACGCAGTTCGCATGGGAGAC ACTCAAGTCGGGCAAGGTCATCCCGGGCTACGGCCACGCCGTGCTTCGGA AAACCGATCCCCGCTACACCTCTCAGCGAGAGTTTGCCTTGAAATACTTG CCGGATGACGAACTCTTCAAGATTGTGGGCACGATCTACGAGGTGGTCCC GGACGTGTTGACGGAGCACGGGAAGACCAAGAACCCCTACCCGAACGTGG ACTCCCACTCTGGCGTCTTGCTCTGGCACTACGGCTTCAAAGAGTTCAAC TACTACACGGTATTGTTTGGAGTTTCGCGGGCCTTGGGAGCCTTGTCGCA GGTGTTTTGGGACCGGGCTCTGGGGATGCCTCTGGAGCGACCGAAGTCTG TCACCTCTAAGTGGATCCTGGAGCATGTGAACAACAGCAAAAGTCAGTAA ATGATCACGCATATGTCCCGTCGCCTCCGCAATACCGTGGCTCCATCCAT GAAGTCACTGGCCACGCGGGGTATGGCATCCATTCAGGAGACCCTCACGG AGCTTGTGCCCGTCAAGCAAGCCGAGCTCGTCGCTCTGAAAAAAGAGCAC GGACACAAGGTCATCGGCGATGTAACCGTGGATCAATGCATTGGGGGCGG GCGAGACATCAAGTCTCTTTTCTGGGAAACTTCGCTCCTGGACGCGCAAG AGGGCATCCGCTTCCGAGGCTATTCGATCCCGGAGCTGCAGCAGAAGCTC CCCACCTTCAAAGGGCCTGCCGGACAGGGAGAACCCACCCCAGAGGCCTT GGTCTGGCTGATGCTCACAGACACGATCCCTACCAAGGCAGAAGCGGACT CCTTGACGCATGAGCTTTACAAGCGTTCCGAGATCCCCCAGCACGTGGTC GCGCTCCTCAAGTCCTTGCCCAAGTCGCTCCACCCGATGAGCCAGTTGGT CGTGGGCCTCATGGCTCTGCAGAAGGACAGCAAATTCGCGGCGGCCTACG CGAGCGGCGTTCACAAGAAGGAATATTGGAAGCACACGCTGGAAGACATC CTGGACGTATGGGCCAAGCTGCCAGAGCTCGCAGCTTTGGTGTTCAGCAA CACGTACAAAGACGGGTCTGTCGGGAGCAAGGATCCTTCCCTGGACTACT CCGCCAATTTCGCCCGGCGTCTGGGCTACAATAAACCCGAGTTCGACGAG CTCATGCGCCTGTACCTCGTCATCCATTCCGATCACGAGGGAGGGAATGC CTCGGCGCATACCACTCACCTGGTCGGCTCGACCCTCTCCGACCCCTACC TGTCCTACTCGGCGGGCCTCAATGCCTTGGCGGGCCCCCTGCATGGACTG GCCAATCAGGAAGTGCTTGGGTGGATATTGGACCTGCAAAAGAAATTCAA AGCGGAGGGGAAGCCTGTGAACAAGGAGACCATCACGCAGTTCGCATGGG AGACACTCAAGTCGGGCAAGGTCATCCCGGGCTACGGCCACGCCGTGCTT CGGAAAACCGATCCCCGCTACACCTCTCAGCGAGAGTTTGCCTTGAAATA CTTGCCGGATGACGAACTCTTCAAGATTGTGGGCACGATCTACGAGGTGG TCCCGGACGTGTTGACGGAGCACGGGAAGACCAAGAACCCCTACCCGAAC GTGGACTCCCACTCTGGCGTCTTGCTCTGGCACTACGGCTTCAAAGAGTT CAACTACTACACGGTATTGTTTGGAGTTTCGCGGGCCTTGGGAGCCTTGT CGCAGGTGTTTTGGGACCGGGCTCTGGGGATGCCTCTGGAGCGACCGAAG TCTGTCACCTCTAAGTGGATCCTGGAGCATGTGAACAACAGCAAAAGTCA GTAAATGATCACGCATATGTCCCGTCGCCTCCGCAATACCGTGGCTCCAT CCATGAAG back to top
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