EWM27541.1, cds3109 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27541.1 vs. NCBI_GenBank
Match: gi|585109808|gb|EWM27541.1| (hypothetical protein Naga_100015g44 [Nannochloropsis gaditana]) HSP 1 Score: 441.039 bits (1133), Expect = 7.897e-157 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 Query: 1 MLQQACARVESPISRRVCAGAAAARITPRIAALRAVSKHFTYSERQFTSSTGASNNPEARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWHDGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYIRNPSTGLVEYPLGHPSQT 211 MLQQACARVESPISRRVCAGAAAARITPRIAALRAVSKHFTYSERQFTSSTGASNNPEARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWHDGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYIRNPSTGLVEYPLGHPSQT Sbjct: 1 MLQQACARVESPISRRVCAGAAAARITPRIAALRAVSKHFTYSERQFTSSTGASNNPEARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWHDGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYIRNPSTGLVEYPLGHPSQT 211
BLAST of EWM27541.1 vs. NCBI_GenBank
Match: gi|553188941|ref|XP_005854898.1| (response regulator receiver domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|553196087|ref|XP_005856267.1| response regulator receiver domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292800|gb|EKU20102.1| response regulator receiver domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294162|gb|EKU21462.1| response regulator receiver domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 220.32 bits (560), Expect = 5.043e-71 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 Query: 1 MLQQACARVESPISRRVCAGAAAARITPRIAALRAVSKHFTYSERQFTSSTGASNNPEARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFF 107 MLQQACARVESPISRRVCAGAAAARITPRIAALRAVSKHFTYSERQFTSSTGASNNPEARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFF Sbjct: 5 MLQQACARVESPISRRVCAGAAAARITPRIAALRAVSKHFTYSERQFTSSTGASNNPEARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFF 111
BLAST of EWM27541.1 vs. NCBI_GenBank
Match: gi|516126703|ref|WP_017557283.1| (DUF1348 domain-containing protein [Nocardiopsis baichengensis]) HSP 1 Score: 206.068 bits (523), Expect = 1.025e-64 Identity = 99/151 (65.56%), Postives = 116/151 (76.82%), Query Frame = 0 Query: 57 PEARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWHDGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYI--RNPSTGLVEYPL 205 PE+RPP PP+T ETA +KV+ A+DAWNTR+P VALAYTPDS WRNRD F QGR+ I AFL +KW +E DY L K LW FHGNRI+ RF+YE D GQWWRSHGNEQWE+DA+GLM RR+ASINDV I ES+RR I R + +E PL Sbjct: 2 PESRPPVPPFTLETALQKVQAAEDAWNTRDPHRVALAYTPDSVWRNRDTFLQGRDEIIAFLTRKWERELDYALRKSLWAFHGNRIAVRFQYESRDSAGQWWRSHGNEQWEFDAQGLMLRREASINDVPIAESDRRIIGPRPEAEYGIEIPL 152
BLAST of EWM27541.1 vs. NCBI_GenBank
Match: gi|971872120|ref|WP_058940933.1| (DUF1348 domain-containing protein [Streptomyces kanasensis] >gi|971328983|gb|KUH39741.1| histidine kinase [Streptomyces kanasensis]) HSP 1 Score: 204.912 bits (520), Expect = 2.511e-64 Identity = 100/152 (65.79%), Postives = 118/152 (77.63%), Query Frame = 0 Query: 57 PEARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWHDGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYIRNP---STGLVEYPL 205 PE RPP+PP+T ETA +KV+ A+DAWNTR+P VA AYTPDS WRNRD F GRE I AFL +KW +ERDY L K LWGFHGNRI+ RF+YEWHD +GQWWRS+GNE WE+DA+GLM+RR+ASINDV I +ERR I P S V+ PL Sbjct: 2 PEDRPPYPPFTQETALQKVQAAEDAWNTRDPRRVASAYTPDSMWRNRDRFVAGREEIVAFLTRKWERERDYALRKSLWGFHGNRIAVRFQYEWHDAEGQWWRSYGNELWEFDARGLMRRREASINDVAITGAERR-IHGPRPLSEHGVDIPL 152
BLAST of EWM27541.1 vs. NCBI_GenBank
Match: gi|516106407|ref|WP_017536987.1| (DUF1348 domain-containing protein [Nocardiopsis halophila]) HSP 1 Score: 204.527 bits (519), Expect = 3.682e-64 Identity = 98/151 (64.90%), Postives = 115/151 (76.16%), Query Frame = 0 Query: 57 PEARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWHDGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYI--RNPSTGLVEYPL 205 PE+RPP PP+T ETA +KV+ A+DAWNTR+P VALAYTPDS WRNRD F QG + I AFL +KW +E DY L K LW FHGNRI+ RF+YE D GQWWRSHGNEQWE+DA+GLM RR+ASINDV I ES+RR I R + +E PL Sbjct: 2 PESRPPVPPFTLETALQKVQAAEDAWNTRDPHRVALAYTPDSVWRNRDTFLQGHDEIIAFLTRKWERELDYALRKSLWAFHGNRIAVRFQYESRDSAGQWWRSHGNEQWEFDAQGLMLRREASINDVAIAESDRRIIGPRPEAEYGIEIPL 152
BLAST of EWM27541.1 vs. NCBI_GenBank
Match: gi|519030188|ref|WP_020186063.1| (hypothetical protein [Methylopila sp. 73B]) HSP 1 Score: 202.986 bits (515), Expect = 1.663e-63 Identity = 91/136 (66.91%), Postives = 113/136 (83.09%), Query Frame = 0 Query: 58 EARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWHDGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYI 193 + RPP PP+TFETAT K RKA+DAWNT +P+ V+LAYT DS WRNR +FF GR AI AFL +KWAKE DY L+KELW FH NRI+ RF+YEWHD G W+RS+GNEQWE+D +GLM+RR+ASINDV I+ES+R+++ Sbjct: 3 DTRPPLPPFTFETATLKARKAEDAWNTHDPEKVSLAYTEDSTWRNRSDFFTGRPAIVAFLTRKWAKELDYRLIKELWAFHDNRIAVRFQYEWHDAAGDWFRSYGNEQWEFDERGLMRRREASINDVVIRESQRKFL 138
BLAST of EWM27541.1 vs. NCBI_GenBank
Match: gi|1110674190|ref|WP_071902744.1| (DUF1348 domain-containing protein [Cystobacter ferrugineus] >gi|1109185313|gb|OJH36251.1| hypothetical protein BON30_34410 [Cystobacter ferrugineus]) HSP 1 Score: 201.445 bits (511), Expect = 7.762e-63 Identity = 93/136 (68.38%), Postives = 108/136 (79.41%), Query Frame = 0 Query: 58 EARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWHDGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYI 193 E RPP PP+T+ETA EKVRKA+DAWN+R+P VALAYT DS WRNR EF QGR AI L +KW KE DY L+KELW FH NRIS RF+YEWHD G W+RSHGNEQWE+D GLM+RR+ASINDV I SER+++ Sbjct: 3 ELRPPLPPFTYETAVEKVRKAEDAWNSRDPQRVALAYTQDSRWRNRSEFVQGRPAIIGLLTRKWEKELDYRLIKELWAFHQNRISVRFQYEWHDSTGNWFRSHGNEQWEFDENGLMRRREASINDVPISASERKFL 138
BLAST of EWM27541.1 vs. NCBI_GenBank
Match: gi|506412073|ref|WP_015931792.1| (DUF1348 domain-containing protein [Methylobacterium nodulans] >gi|219949791|gb|ACL60183.1| protein of unknown function DUF1348 [Methylobacterium nodulans ORS 2060]) HSP 1 Score: 201.06 bits (510), Expect = 1.009e-62 Identity = 97/154 (62.99%), Postives = 116/154 (75.32%), Query Frame = 0 Query: 58 EARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWHDGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYIRNPSTGLVEYPLGHPSQT 211 E+RPPFPPYT ETA K R A+DAWN R+P V+LAYTPDS WRNR EFF GREAI AFL +KWA+E DY L+KE+W FH NRI+ RF YEWHD G W+RSHGNEQWE+D GLM+RR+ASINDV I+E++R++ L P GHP + Sbjct: 3 ESRPPFPPYTAETAARKARAAEDAWNHRDPVRVSLAYTPDSRWRNRAEFFSGREAIVAFLERKWARELDYRLIKEVWAFHQNRIAVRFAYEWHDDSGNWFRSHGNEQWEFDDSGLMRRREASINDVPIRETDRKF----HWPLGPRPEGHPGLS 152
BLAST of EWM27541.1 vs. NCBI_GenBank
Match: gi|517042945|ref|WP_018231763.1| (DUF1348 domain-containing protein [Thioalkalivibrio thiocyanodenitrificans]) HSP 1 Score: 200.29 bits (508), Expect = 2.098e-62 Identity = 91/134 (67.91%), Postives = 113/134 (84.33%), Query Frame = 0 Query: 60 RPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWHDGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYI 193 RPPFPP+T ETA +KVR A++AWNT +P+ V+LAYT DS WRNR EFFQGREAI AFL++KWA+E DY L+KELW FH NRI+ RF+YEWHD G W+R+HGNE WE+D +GLM+RR+ASINDV I ESER+++ Sbjct: 4 RPPFPPFTRETAIQKVRMAENAWNTGDPEKVSLAYTEDSRWRNRAEFFQGREAIVAFLKRKWARELDYRLIKELWAFHDNRIAVRFQYEWHDDSGNWFRAHGNENWEFDERGLMRRREASINDVPIGESERKFL 137
BLAST of EWM27541.1 vs. NCBI_GenBank
Match: gi|516220856|ref|WP_017624819.1| (hypothetical protein [Nocardiopsis chromatogenes]) HSP 1 Score: 199.904 bits (507), Expect = 2.169e-62 Identity = 98/150 (65.33%), Postives = 112/150 (74.67%), Query Frame = 0 Query: 58 EARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNWRNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWHDGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYI--RNPSTGLVEYPL 205 E RPPFPP+T ETA +KV+ A+DAWNTR+P+ VALAYTPDS WRNRD F QGRE I AFL +KW +E DY L K LW FHGNRI+ RF+YE D GQWWRSHGNEQWE+D GLM RR+ASINDV I ES+RR R +E PL Sbjct: 3 EPRPPFPPFTEETALQKVQAAEDAWNTRDPERVALAYTPDSVWRNRDVFLQGREEIAAFLARKWERELDYALRKSLWAFHGNRIAVRFQYECRDTSGQWWRSHGNEQWEFDTNGLMLRREASINDVPIAESDRRIFGTRPKEEYGIEIPL 152 The following BLAST results are available for this feature:
BLAST of EWM27541.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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