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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100015g44.6357.mrna |
Orig protein id | gnl|cribi|Naga_100015g44.6357 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002460.1 | supercontig | CM002460.1:759484..760526 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3117 ID=rna3117|Name=rna3117|organism=Nannochloropsis gaditana|type=mRNA|length=2626bp AGGCATAGCGATCATCACCCGAGGTCTCGTCATGGCGTCTCACGCGATCT CTGAAGTTTCGTGCGAGTAGATGTCGAGTCCTGAGTTTTTTAGCAAACTC TGGTGTGAAAAGCAATGATGGCACCGCGCATGGTGGGAGCTTTCTTTTGA AAGCTGTCCGACAGTATGGTAGGGATACTGCAAGGACGTATCTTGAGCGC ACTGGTCGACGCGGCAGGAGGATTGCCCGTGCACGCCTCAGGTCAGCGAG CCTTCGCCCTGTCCGGCCTTCCCACTGGGTTTACACCCACAAGTCATGCT ATCATTCAGTGCTTTGGCAAATCGGTGAGCTGTTAAAGTAAGAAGTGCTT CAATTTTCCATCAGCCACGAAGTCTGGCTCACGAAAAAGCGCGAGGAGGC CATGGGTTACCTGACTTACGACACGCCCTAGCCAGAGCAATATATGGTCA TAAGTCCCTATGATTGTATGGACGTTGCCTGCTCTCAAGTGTTGGCTTTT CATGCCAAGAGCTCTGCTTCATCACCTGTCACGAACACTGACAAAACAGC TTATCTGAAAGGAAAGCGAAAGAAACTCCTCTTAAAAGCCCAGTCTAAAT AGTGTCTTTAACTATGCCCTTACATGCGAAGTCATGTAGAACGCACAATC TTTCTGCTGTGTTGGTGGCAGGCTATTGCCTGTCGTACGAAGTGTCTGCG TGTCTTTTTCTTGGCCGCATGCCTCTTCCTGTCCCGTCACGACTTTCGCT GTAGTTGTCTCCTTCTCCTTTTAAGCCTCATGACACCCCCATGTCCTATC GATATTGTGCAAACAGACACGTGCGTCCTTCCTCGCGGTAGCTAGAAGTG AAACAAGAAGCCAGCCATGAAATTGCTTACCAGTGTCGTCGTTCTCTCAG CGGCCGCGATCCTAAGCGTCGTGAATGGCTTCATGACGCCGGCCCCCCAA GCCTCCTTTGTCGCCAAGTTGGACCCTGCCATGTCCAGGATTCATCGAAG CCGCGCATCTCCTAGCATGGCTTTGAGCACAGCGATGGGTGCCAATGGAG CGTGGCGCTTCTTGTCCGCTGCCCGCAAGGCCGCCGTCTCCCTGCCTACC AAGTCCTCAACAGCACTGGCATCCAGCGCAGCAGACATGGCCCCCAAGAA AAAAATGACCGCCTTTGAAATGTACGAGAAGGGCAGTGAGCTGATCGTCA ACCTTTTTCCCATTTGGACCGTGCTCTCCTCGGGCCTTGCCCTCTACCGC CCTGAGCTCTTCGCCTGGTTCACCACCAAGTACTTTACCTGGGGACTGGG GCTTCTCATGCTCTCCATGGGCATCACCCTCTCACCGCAGGACTTCGCGG ACGTCCTCAAGCGACCCTCGGCCGTACTGGTGGGTTTCATCTTCTGCTAC TTGTTCATGCCCGCCTTCGCCTACGCCACGGCGCAAGGCTTCGCCCTGAG CCCCGAGATGGTCGCCGGCCTGGTTCTGGTCGGGAGCATCAACGGGGGGC AGGCCTCGAACCTGTGCACCTACATTGCCAAGGGCGACGTGGCTCTGTCC GTGATGATGACCACAGCCACCACCCTGGGCGCCATCTTCATGACACCCCT CCTCTGCAAGTTCCTCCTCGGGGCCATCGTCCCCGTCGATGCCGTGGGCA TTGCCCTCTCCACCGTTCAAGTCGTCCTGGCTCCCATTGTCCTGGGTATG CTGGCCAACAAGTTCTTGAACCGGGCCGTCAAAGCAGTGCTGCCCTTCTC CCCCGTGGTGGGCATGGTCTCAACCTGCCTCTTGGTTGCCTCCGCGGTCG CGCAGTGCGCCCCGGCCATTCTGGGCGCGGGGTGGAGCCTGCAAATCGCC ACCATCTTCTACCATCTGGTCGCTGGGGTCGCTGGATATGCCATCCCGCG CTTCCTGAAATTTTCTGAGACGGACTCCCGGACTATGGCGATTGAGACCG CGATGAAATCGTCCGCTTTCGGATTCCTGTTGGCTAGCCTCCACTTTCCT AATTTCTTGGTCCGGGTTCCCCCCGCCGTCTCCGTGGTGTGGATGGCTGT AACAGGCTCGACTCTGGCGGTCATCTGGCGTTTCATCCCGGTCAAAGACG AGAAGAAATGAGCGGCGACTGCAAAATCGTCTTCCTTGTGCTGAATCAGA GGAAGACTATAGCAGACGATGATCGAAAAGCTTTTCTCGAAAAGATCGCA TGCATGTTTGCCTCTGATTGTTGACCGGCACGACGTGATCCGTACCCCTG TTCCCTGTTTGTGTCTCTGTGAGCGCGTGTAGTTGTGGTTAAGTGAGTCA CAGGGTTCTGAAGTGTCATTATTTGTCTGACAAATGTCATGTATGTCCTG GGATAACCTGAACGTAACAAGTGGACATTTATGTTTGTTAATGATTCTTT AAAGATACTCTTCTACTCTTTCATATCTCTACCTTTCAATCATTTTTTTT AAATTTTTGGGGGTTTTACGACACCAAAGTAAGGAAGTGAGAAATCGAGA AAAGGTCGATTGGGGGCGGCTTTCCCTTTACCTGTTGAATACCGCATCAA CGAAGAGGTTCCCTTCCCAACTTAATAGTCATGCGGCGGATATCGTATGT TTACCCAAAATTAGGGAAGCTTGTCC back to topprotein sequence of rna3117 >rna3117-protein ID=rna3117-protein|Name=rna3117|organism=Nannochloropsis gaditana|type=polypeptide|length=211bp MLQQACARVESPISRRVCAGAAAARITPRIAALRAVSKHFTYSERQFTSS TGASNNPEARPPFPPYTFETATEKVRKAQDAWNTRNPDVVALAYTPDSNW RNRDEFFQGREAIRAFLRKKWAKERDYCLMKELWGFHGNRISARFEYEWH DGQGQWWRSHGNEQWEYDAKGLMKRRDASINDVRIKESERRYIRNPSTGL VEYPLGHPSQT back to topmRNA from alignment at CM002460.1:759484..760526+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3117 ID=rna3117|Name=rna3117|organism=Nannochloropsis gaditana|type=mRNA|length=1043bp|location=Sequence derived from alignment at CM002460.1:759484..760526+ (Nannochloropsis gaditana) ATGTTGCAACAGGCCTGCGCGCGCGTGGAATCCCCTATCTCACGCCGTGT
ATGTGCAGGAGCAGCTGCTGCTCGGATAACCCCGAGAATTGCTGCATTGC
GTGCAGTTTCCAAGCATTTCACATATAGCGAACGACAATTTACCTCCAGT
ACTGGCGCTTCCAACAACCCTGAAGCTCGcccaccttttcccccttacAC
ATTTGAAACAGCCACTGAAAAGGTAATTCCTTACACACCCGCAACAAGTG
GTTTTATGATCTAGCTTGACAATTTAGTCCTCTCATTAGGTTCGAAAGGC
ACAAGACGCTTGGAATACTCGAAATCCTGACGTCGTAGCTCTAGCATGTA
CGTTTTGTGGCTGAACTCGGGTTCTGgtcatccttctcttcatTTCTCAA
CCTCCTTTTCGCTGTCACGTTCGATAGACACACCCGACAGCAACTGGCGG
AACCGAGACGAATTTTTCCAGGGTCGTGAGGTAAGTAGCGGGCCTGGCAT
CTTTACCTTCCAAGAGTGGTGAAGACTGTGCAATCTCTGATGCGTGTCTC
TGCACTTCCTATGCACACAAGGCAATCAGAGCATTTCTGCGGAAAAAGTG
GGCGAAAGAGCGCGATTATTGTCTGATGAAAGAGCTCTGGGGTTTTCATG
GTAATCGAATCAGCGCCCGATTTGAGTACGAATGGCACGACGGGCAGGGT
CAATGGTGGCGATCACACGGGAACGAGCAATGGGAATACGATGCGAAGGG
TACGTCACAGTCATGCACAACGACGCACAAAGCCTTGTTAGAAGCCTGCA
TACGCCAGGAAAAATTTGTTTCCGTGGAGCGTAGAATGATTGATCTTGAA
CCGGCAATAAACTTTGCCAGAGGGACAAGTATCCCAATATGGTATtgtcc
ctttccatcccgcAATAGGCTTAATGAAGCGACGAGATGCCAGCATAAAT
GACGTTCGTATCAAGGAATCCGAAAGGCGATACATTCGGAATCCTTCTAC
GGGTTTGGTAGAGTATCCATTAGGCCATCCTTCCCAGACATGA back to topCoding sequence (CDS) from alignment at CM002460.1:759484..760526+ >rna3117 ID=rna3117|Name=rna3117|organism=Nannochloropsis gaditana|type=CDS|length=3180bp|location=Sequence derived from alignment at CM002460.1:759484..760526+ (Nannochloropsis gaditana) ATGTTGCAACAGGCCTGCGCGCGCGTGGAATCCCCTATCTCACGCCGTGT ATGTGCAGGAGCAGCTGCTGCTCGGATAACCCCGAGAATTGCTGCATTGC GTGCAGTTTCCAAGCATTTCACATATAGCGAACGACAATTTACCTCCAGT ACTGGCGCTTCCAACAACCCTGAAGCTCGcccaccttttcccccttacAC ATTTGAAACAGCCACTGAAAAGGTTCGAAAGGCACAAGACGCTTGGAATA CTCGAAATCCTGACGTCGTAGCTCTAGCATACACACCCGACAGCAACTGG CGGAACCGAGACGAATTTTTCCAGGGTCGTGAGGCAATCAGAGCATTTCT GCGGAAAAAGTGGGCGAAAGAGCGCGATTATTGTCTGATGAAAGAGCTCT GGGGTTTTCATGGTAATCGAATCAGCGCCCGATTTGAGTACGAATGGCAC GACGGGCAGGGTCAATGGTGGCGATCACACGGGAACGAGCAATGGGAATA CGATGCGAAGGGCTTAATGAAGCGACGAGATGCCAGCATAAATGACGTTC GTATCAAGGAATCCGAAAGGCGATACATTCGGAATCCTTCTACGGGTTTG GTAGAGTATCCATTAGGCCATCCTTCCCAGACATGAATGTTGCAACAGGC CTGCGCGCGCGTGGAATCCCCTATCTCACGCCGTGTATGTGCAGGAGCAG CTGCTGCTCGGATAACCCCGAGAATTGCTGCATTGCGTGCAGTTTCCAAG CATTTCACATATAGCGAACGACAATTTACCTCCAGTACTGGCGCTTCCAA CAACCCTGAAGCTCGcccaccttttcccccttacACATTTGAAACAGCCA CTGAAAAGGTTCGAAAGGCACAAGACGCTTGGAATACTCGAAATCCTGAC GTCGTAGCTCTAGCATACACACCCGACAGCAACTGGCGGAACCGAGACGA ATTTTTCCAGGGTCGTGAGGCAATCAGAGCATTTCTGCGGAAAAAGTGGG CGAAAGAGCGCGATTATTGTCTGATGAAAGAGCTCTGGGGTTTTCATGGT AATCGAATCAGCGCCCGATTTGAGTACGAATGGCACGACGGGCAGGGTCA ATGGTGGCGATCACACGGGAACGAGCAATGGGAATACGATGCGAAGGGCT TAATGAAGCGACGAGATGCCAGCATAAATGACGTTCGTATCAAGGAATCC GAAAGGCGATACATTCGGAATCCTTCTACGGGTTTGGTAGAGTATCCATT AGGCCATCCTTCCCAGACATGAATGTTGCAACAGGCCTGCGCGCGCGTGG AATCCCCTATCTCACGCCGTGTATGTGCAGGAGCAGCTGCTGCTCGGATA ACCCCGAGAATTGCTGCATTGCGTGCAGTTTCCAAGCATTTCACATATAG CGAACGACAATTTACCTCCAGTACTGGCGCTTCCAACAACCCTGAAGCTC GcccaccttttcccccttacACATTTGAAACAGCCACTGAAAAGGTTCGA AAGGCACAAGACGCTTGGAATACTCGAAATCCTGACGTCGTAGCTCTAGC ATACACACCCGACAGCAACTGGCGGAACCGAGACGAATTTTTCCAGGGTC GTGAGGCAATCAGAGCATTTCTGCGGAAAAAGTGGGCGAAAGAGCGCGAT TATTGTCTGATGAAAGAGCTCTGGGGTTTTCATGGTAATCGAATCAGCGC CCGATTTGAGTACGAATGGCACGACGGGCAGGGTCAATGGTGGCGATCAC ACGGGAACGAGCAATGGGAATACGATGCGAAGGGCTTAATGAAGCGACGA GATGCCAGCATAAATGACGTTCGTATCAAGGAATCCGAAAGGCGATACAT TCGGAATCCTTCTACGGGTTTGGTAGAGTATCCATTAGGCCATCCTTCCC AGACATGAATGTTGCAACAGGCCTGCGCGCGCGTGGAATCCCCTATCTCA CGCCGTGTATGTGCAGGAGCAGCTGCTGCTCGGATAACCCCGAGAATTGC TGCATTGCGTGCAGTTTCCAAGCATTTCACATATAGCGAACGACAATTTA CCTCCAGTACTGGCGCTTCCAACAACCCTGAAGCTCGcccaccttttccc ccttacACATTTGAAACAGCCACTGAAAAGGTTCGAAAGGCACAAGACGC TTGGAATACTCGAAATCCTGACGTCGTAGCTCTAGCATACACACCCGACA GCAACTGGCGGAACCGAGACGAATTTTTCCAGGGTCGTGAGGCAATCAGA GCATTTCTGCGGAAAAAGTGGGCGAAAGAGCGCGATTATTGTCTGATGAA AGAGCTCTGGGGTTTTCATGGTAATCGAATCAGCGCCCGATTTGAGTACG AATGGCACGACGGGCAGGGTCAATGGTGGCGATCACACGGGAACGAGCAA TGGGAATACGATGCGAAGGGCTTAATGAAGCGACGAGATGCCAGCATAAA TGACGTTCGTATCAAGGAATCCGAAAGGCGATACATTCGGAATCCTTCTA CGGGTTTGGTAGAGTATCCATTAGGCCATCCTTCCCAGACATGAATGTTG CAACAGGCCTGCGCGCGCGTGGAATCCCCTATCTCACGCCGTGTATGTGC AGGAGCAGCTGCTGCTCGGATAACCCCGAGAATTGCTGCATTGCGTGCAG TTTCCAAGCATTTCACATATAGCGAACGACAATTTACCTCCAGTACTGGC GCTTCCAACAACCCTGAAGCTCGcccaccttttcccccttacACATTTGA AACAGCCACTGAAAAGGTTCGAAAGGCACAAGACGCTTGGAATACTCGAA ATCCTGACGTCGTAGCTCTAGCATACACACCCGACAGCAACTGGCGGAAC CGAGACGAATTTTTCCAGGGTCGTGAGGCAATCAGAGCATTTCTGCGGAA AAAGTGGGCGAAAGAGCGCGATTATTGTCTGATGAAAGAGCTCTGGGGTT TTCATGGTAATCGAATCAGCGCCCGATTTGAGTACGAATGGCACGACGGG CAGGGTCAATGGTGGCGATCACACGGGAACGAGCAATGGGAATACGATGC GAAGGGCTTAATGAAGCGACGAGATGCCAGCATAAATGACGTTCGTATCA AGGAATCCGAAAGGCGATACATTCGGAATCCTTCTACGGGTTTGGTAGAG TATCCATTAGGCCATCCTTCCCAGACATGA back to top
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