EWM27635.1, cds3020 (CDS) Nannochloropsis gaditana

Overview
NameEWM27635.1
Unique Namecds3020
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:523594..525441 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27635.1
ProductOrn/Lys/Arg decarboxylase
Orig transcript idgnl|cribi|Naga_100059g8.8040.mrna
GeneOKR_DC
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:523594..525441 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR000310Orn/Lys/Arg_deCO2ase_major_dom
IPR008286Prn/Lys/Arg_de-COase_C
IPR015421PyrdxlP-dep_Trfase_major_sub1
Homology
BLAST of EWM27635.1 vs. NCBI_GenBank
Match: gi|585109905|gb|EWM27635.1| (Orn/Lys/Arg decarboxylase [Nannochloropsis gaditana])

HSP 1 Score: 1241.48 bits (3211), Expect = 0.000e+0
Identity = 615/615 (100.00%), Postives = 615/615 (100.00%), Query Frame = 0
Query:    1 MIAFSLGRLEAPLLLLGLVGFIKAHAFVAPCRPRPRYESAARPLRRWAREHGADQSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLVDSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLLLEETPFPILKPPDRPKGGAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFKALATLVDKGKRDGSQDMAGEEASSFMTDFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRVLCWEKEK 615
            MIAFSLGRLEAPLLLLGLVGFIKAHAFVAPCRPRPRYESAARPLRRWAREHGADQSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLVDSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLLLEETPFPILKPPDRPKGGAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFKALATLVDKGKRDGSQDMAGEEASSFMTDFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRVLCWEKEK
Sbjct:    1 MIAFSLGRLEAPLLLLGLVGFIKAHAFVAPCRPRPRYESAARPLRRWAREHGADQSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLVDSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLLLEETPFPILKPPDRPKGGAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFKALATLVDKGKRDGSQDMAGEEASSFMTDFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRVLCWEKEK 615          
BLAST of EWM27635.1 vs. NCBI_GenBank
Match: gi|298715386|emb|CBJ27997.1| (decarboxylase [Ectocarpus siliculosus])

HSP 1 Score: 410.994 bits (1055), Expect = 3.903e-132
Identity = 271/625 (43.36%), Postives = 345/625 (55.20%), Query Frame = 0
Query:   32 RPRPRYESAARPLRRWAREH-GADQSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEG-----QQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFL---------------------EVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLV----------------DSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLLLEETPFPILK-PPDRPKGGAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFK--ALATLVDKGKRDGSQDMAGEEASSFMTDFP-PFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRVL 609
            RPRP      R LR   R   G +Q  +P+V+AL+ AA  +++P FFPGHKMG G P  L          ++     + D  +HDLPE+PELDNLFAPEGPIRDAE LAA+ FG A +TW L NGST GVLA+++A V+ H            PA SG   ++ V+LPR+ HKSA++ L+LSGA P FL P+  P   +  GV   + L+ AL+EH  G EVAAV +VSPTY GA  D+  AA  C    VPL+VDEAHGAHLAFL                     E   +E  N G    RA   AL  GADLVVQS HKTL +++Q A +H G G +                 D ++   V  AL  VQSSSP+Y+LLASLD ARW L       +  L  A ++A   +  L       +L    ++      VG DPLRLTV   G G+ G++ADE+LIE+ GVYAELP    +TF  GPGS  E    L  A +  AL     +G   GS   AG   +   T+ P P   K      L C PR+A+F  S+ +S  D   +G+ASAETVCPYPPGIP LLPGE+IT   L  L  V  +GG ++GCSD +L  +RV+
Sbjct:   46 RPRPTAVQRVRCLRTQTRASAGLNQDSTPLVDALAEAAGNVRSPLFFPGHKMGSGAPSRL----------VDLILGGKLDALRHDLPELPELDNLFAPEGPIRDAELLAADAFGAA-KTWMLANGSTCGVLASIIACVQWHNSRAGGAPLADAPAGSGGGRKNVVILPRDAHKSAVHALVLSGATPCFLPPLRHPESGVGLGVGT-AELKAALKEH--GDEVAAVFMVSPTYEGACSDVNSAAEACHGAGVPLVVDEAHGAHLAFLGEAQPPSSRSSEEEEEEEEGEEGGRDEHRNNGSFYPRA---ALRCGADLVVQSAHKTLGSLTQSAFLHLGPGGVFASGGTEGGGGGSGGGDDFSIERAVSDALATVQSSSPSYLLLASLDAARWDLAGTDKNAKRRLREAARIADGVREELSSVEGINVLDLGGEKGSAAGCVGTDPLRLTVSLEG-GVGGYEADEILIEDFGVYAELPGPDYVTFVFGPGSTVEHGQRLAEALRHVALEATSRQGSGSGSVAAAGTAQAVEATNTPVPPPSK------LMCTPREAFFAPSKTVSAVD--AIGQASAETVCPYPPGIPALLPGEVITQAALDALAAVKESGGVISGCSDATLATMRVV 644          
BLAST of EWM27635.1 vs. NCBI_GenBank
Match: gi|516330251|ref|WP_017720910.1| (hypothetical protein [Oscillatoria sp. PCC 10802])

HSP 1 Score: 400.979 bits (1029), Expect = 2.088e-130
Identity = 253/558 (45.34%), Postives = 333/558 (59.68%), Query Frame = 0
Query:   54 DQSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLVDSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLLLEETPFPILKPPDRPKG--GAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFKALATLVDKGKRDGSQDMAGEEASSFMTDFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRVL 609
            DQ+++P++EAL   A R  APF+ PGHK GRG+P     P A+    L KT      V++ DLPE+PELDNLFAPEG IR+A+ LAA+ FG AQ TWFLVNGST G++A++LA                  +   K++LPRNVH+SAI+GL+LSGAVPVF+SP YDPAWD+ + +   + + +AL+ H    +  AV++V PTYHG   D+   A L  +  +PL+ DEAHG H AF       P    P        ALA GADL VQS HK L+A++Q +M+H  +G  +D    + V  ALQLVQS+SP+Y+LLASLD AR Q+ +    G   L +A +LA  A+  L +     +L+PP  P+     F  LD  RLTV   G G+SG++ADE+L  + GV AELP  R LTF V  G+   DI+ LV  F    TL +K KR         EA       P      AA       PR+A+F  +E L +  ER   R SAE VCPYPPG+PVL+PGEIIT   L +L+ VLS+GG+VTGC DPSL  ++V+
Sbjct:   10 DQTRAPLLEALQELAHRQHAPFYAPGHKRGRGIP----QPLADL---LGKT------VFEADLPELPELDNLFAPEGAIREAQQLAAQAFGAAQ-TWFLVNGSTGGIIASILATC----------------AAGDKIILPRNVHRSAISGLVLSGAVPVFVSPEYDPAWDLANSI-TPAGVAEALDRH---PDAKAVMVVYPTYHGVCGDVAAIAELAHRHGIPLLADEAHGPHFAF------HPDLPSP--------ALAAGADLTVQSAHKVLSAMTQASMLHV-RGDRIDR---QRVSKALQLVQSTSPSYLLLASLDAARQQMAT---QGEQLLAQALELAEGARSRLAQIPGLSVLQPPS-PEAVTPGFAALDRTRLTVSAAGLGLSGYEADEILHGQLGVTAELPCLRQLTFIVSAGNTPADIEQLVRGFT---TLAEKEKR--------LEAGLSCAGVPVLPCSPAAPA---LTPREAFFAETETLQS--ERACHRISAEIVCPYPPGVPVLVPGEIITTAALDYLQRVLSSGGTVTGCGDPSLQTLKVV 495          
BLAST of EWM27635.1 vs. NCBI_GenBank
Match: gi|808797286|ref|WP_046279676.1| (lysine decarboxylase [Limnoraphis robusta] >gi|807214733|gb|KKD37034.1| lysine decarboxylase [Limnoraphis robusta CS-951])

HSP 1 Score: 398.667 bits (1023), Expect = 1.094e-129
Identity = 237/556 (42.63%), Postives = 338/556 (60.79%), Query Frame = 0
Query:   54 DQSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLVDSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLLLEETP-FPILKPPDRPKGGAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFKALATLVDKGKRDGSQDMAGEEASSFMTDFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRV 608
            DQ+K+P+VE L   A R  A F+ PGHK G+G+      P  +T        V    V++ DLPE+PELDNLFAPEG I++A+ LAAE FG A++TWFLVNGST+G++AA+LA  R   Q                +++PRNVH+S I+GLILSGA+P+F+ P YD  WD+ + +  + AL+ AL +H   S+V AVL V PTYHG   +I+Q A +  ++ +PL+VDEAHG H  F       P    P+A      AL  GADLVVQS HK L A++Q +M+H  +G  ++   L  +  ALQ+VQSSSPNY+LLASLD AR Q+ +    GR  + +   LAAKA R+LL++ P   +L+ P + K  +F  LDP RLT+     G++G+ ADE+L ++  V AELP+ + LTF +  G+ E +I+ LV+AF  L+T+                  +F    P F        +++  PR+A+  AS+  S  D   +G  SAE +CPYPPGIP+L+PGE IT+E + +L+ +L+ GG +TGCSDP+L  +++
Sbjct:    3 DQTKAPLVETLQTLANRPHAAFYAPGHKQGQGI-----NPLLQT--------VLGSKVFRADLPELPELDNLFAPEGVIKEAQELAAEAFG-AEQTWFLVNGSTSGIIAAILATCRTGDQ----------------IIVPRNVHQSVISGLILSGAIPIFIQPEYDTHWDLAYSITTD-ALKAALNQH---SDVKAVLAVYPTYHGICGEIKQLAAITHQYNIPLLVDEAHGPHFHF------HPD--FPIA------ALTAGADLVVQSIHKVLGAMTQASMLHV-QGNKIN---LNRLNQALQMVQSSSPNYLLLASLDAARQQMAT---QGRFLMEQTLNLAAKA-RILLDKIPKISVLELP-KSKQTSFTELDPTRLTIKISDLGLTGYQADEILHQQFKVTAELPSLKHLTFIISLGNTEANIEQLVSAFTQLSTM-----------------GNFQVVNPEFPLPPGFLPAMQLSPREAFEAASQRRSVQD--CLGCISAEIICPYPPGIPILMPGEQITLEAITYLQNILAGGGIITGCSDPTLETLKI 482          
BLAST of EWM27635.1 vs. NCBI_GenBank
Match: gi|737152000|ref|WP_035138904.1| (arginine decarboxylase [Fischerella muscicola])

HSP 1 Score: 381.719 bits (979), Expect = 7.290e-123
Identity = 229/559 (40.97%), Postives = 325/559 (58.14%), Query Frame = 0
Query:   54 DQSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLVDSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLLLEETPFPILKPPDRPKGGA---FVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFKALATLVDKGKRDGSQDMAGEEASSFMTDFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRVL 609
            DQ+++P+++ L + A R  APF+ PGHK G G+   +   F +T             V+++DLPE+ ELDNLFAP G I+ A+ LAAE FG AQ TWFLVNGST G+ AA+LA               +G     K++LPRNVH SAI GLILSGA+P+F++P YDP  DI H +   +A+  AL +H    +  AV++V PTY+G   D++  A +  ++ +PLIVDEAHGAH AF                +  T AL  GADL VQS HKTL A++Q +M+H  +G  ++   L     ALQLVQS+SP+Y+LLASLD AR Q+      G+  + R  +LA +A+  + + +   IL+ P + + G    F+ LD  RLTV   G G++GF A+E+L ++ GV AE    + LTF +  G+ +EDI+ LV A   L  ++       S    G+E          +D       S+   PR+A+F A+E L  +  + +GR  AETVCPYPPGIPVL+PGE+IT   L +L+ + + GG ++GC+D SL  I V+
Sbjct:    6 DQNQTPLLDTLKVCAERFHAPFYTPGHKRGVGISPKIADVFGKT-------------VFRNDLPELTELDNLFAPAGVIQQAQELAAEVFGAAQ-TWFLVNGSTCGIEAAILA------------TCNTG----DKIILPRNVHSSAIAGLILSGAIPIFVNPEYDPVLDIAHSI-TPNAVAAALFKH---PDAKAVIMVYPTYYGVCGDVQAIAQITHQYNIPLIVDEAHGAHFAF--------------HPQLPTPALQAGADLSVQSIHKTLGAMTQASMLHI-QGKRINRDRLN---KALQLVQSTSPSYLLLASLDAARQQMAL---YGKQLMSRTLQLAKEARTRITQISGLSILQSPLQGELGGSPGFISLDQARLTVTVSGLGITGFTAEEILDQQFGVTAEFATLQHLTFIISLGNTQEDIEHLVQALTKLTEMITSSPSLLSYKAEGQEI---------WDDVFNVGASVHISPREAFFAATETLPIS--KTIGRICAETVCPYPPGIPVLMPGEMITKPALEYLQKIQAMGGFISGCADTSLSTITVV 498          
BLAST of EWM27635.1 vs. NCBI_GenBank
Match: gi|501591856|ref|WP_012595621.1| (lysine decarboxylase [Cyanothece sp. PCC 8801] >gi|218167616|gb|ACK66353.1| Orn/Lys/Arg decarboxylase major region [Cyanothece sp. PCC 8801])

HSP 1 Score: 380.563 bits (976), Expect = 1.688e-122
Identity = 232/555 (41.80%), Postives = 332/555 (59.82%), Query Frame = 0
Query:   55 QSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLVDSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLLLEETPFPILKPPDRPKGGAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFKALATLVDKGKRDGSQDMAGEEASSFMTDFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRVL 609
            Q + P++EAL+ +  +  + F+ PGHK G G+   L        T L KT      V+Q DLPE+P+LDNLFAP G I+ A+ LAAE +G A +TWFLVNGST G+++A+LA  R         P         K+++PRN+H+SAI GLILSGAVP+F++P YDP WD+ + +  E AL++AL E+   SEV AV++V PTYHG   D++  A +   + +PL+VDEAHGAH  F     N P +           AL+ GADLVVQSTHK L A++Q +M+H  +G  +D    + +  ALQL QS+SP+Y+LLASLDGAR Q+      G+  L +  +L+ K +  + +     IL   ++P  G F  LD  RLTV   G G++GF+ DE+L ++ GV AELP  R L F +  G++ EDI+ L+ AFK L   +    R              +T  PP         S    PR+A+F+A+++++  D   +G  S E +CPYPPGIP+L+PGE IT + + +L+ VL  GGS+TGCSDPSL +++++
Sbjct:   12 QYRVPLIEALTNSIKQQNSAFYAPGHKRGEGIAPSLA-------TLLGKT------VFQADLPELPDLDNLFAPSGVIQKAQELAAEVYG-ADQTWFLVNGSTCGIISAILATCR---------PG-------DKIIVPRNIHQSAIAGLILSGAVPIFINPEYDPIWDLAYSITPE-ALERALIEN---SEVKAVMVVYPTYHGICGDLQAIAKITHGYNIPLLVDEAHGAHFTF---HPNLPFS-----------ALSLGADLVVQSTHKVLGAMTQASMLHQ-QGNRIDP---QRISQALQLTQSTSPSYLLLASLDGARQQMAL---QGQDLLSQTIELSQKVREEISQIKGLQILNL-EQPCPG-FKQLDITRLTVNVSGLGLTGFEVDEILHQQLGVTAELPMLRHLAFIISIGNKTEDINQLIKAFKTLTANLSPSPRHP------------VTPSPP-----PLLSSCYISPREAFFSATKMVNIEDS--IGGISGELICPYPPGIPLLMPGEKITAQAIEYLQKVLDLGGSITGCSDPSLKQLKII 490          
BLAST of EWM27635.1 vs. NCBI_GenBank
Match: gi|506264362|ref|WP_015784137.1| (lysine decarboxylase [Cyanothece sp. PCC 8802] >gi|256590375|gb|ACV01262.1| Orn/Lys/Arg decarboxylase major region [Cyanothece sp. PCC 8802])

HSP 1 Score: 380.178 bits (975), Expect = 2.358e-122
Identity = 231/555 (41.62%), Postives = 332/555 (59.82%), Query Frame = 0
Query:   55 QSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLVDSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLLLEETPFPILKPPDRPKGGAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFKALATLVDKGKRDGSQDMAGEEASSFMTDFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRVL 609
            Q + P++EAL+ +  +  + F+ PGHK G G+   L        T L KT      V+Q DLPE+P+LDNLFAP G I+ A+ LAAE +G A +TWFL+NGST G+++A+LA  R         P         K+++PRN+H+SAI GLILSGAVP+F++P YDP WD+ + +  E AL++AL E+   SEV AV++V PTYHG   D++  A +   + +PL+VDEAHGAH  F     N P +           AL+ GADLVVQSTHK L A++Q +M+H  +G  +D    + +  ALQL QS+SP+Y+LLASLDGAR Q+      G+  L +  +L+ K +  + +     IL   ++P  G F  LD  RLTV   G G++GF+ DE+L ++ GV AELP  R L F +  G++ EDI+ L+ AFK L   +    R              +T  PP         S    PR+A+F+A+++++  D   +G  S E +CPYPPGIP+L+PGE IT + + +L+ VL  GGS+TGCSDPSL +++++
Sbjct:   12 QYRVPLIEALTNSIKQQNSAFYAPGHKRGEGIAPSLA-------TLLGKT------VFQADLPELPDLDNLFAPSGVIQKAQELAAEVYG-ADQTWFLINGSTCGIISAILATCR---------PG-------DKIIVPRNIHQSAIAGLILSGAVPIFINPEYDPIWDLAYSITPE-ALERALIEN---SEVKAVMVVYPTYHGICGDLQAIAKITHGYNIPLLVDEAHGAHFTF---HPNLPFS-----------ALSLGADLVVQSTHKVLGAMTQASMLHQ-QGNRIDP---QRISQALQLTQSTSPSYLLLASLDGARQQMAL---QGQDLLSQTIELSQKVREEISQIKGLQILNL-EQPCPG-FKQLDITRLTVNVSGLGLTGFEVDEILHQQLGVTAELPMLRHLAFIISIGNKTEDINQLIKAFKTLTANLSPSPRHP------------VTPSPP-----PLLSSCYISPREAFFSATKMVNIEDS--IGGISGELICPYPPGIPLLMPGEKITAQAIEYLQKVLDLGGSITGCSDPSLKQLKII 490          
BLAST of EWM27635.1 vs. NCBI_GenBank
Match: gi|553734094|ref|WP_023068718.1| (aminotransferase class-V family protein [Lyngbya aestuarii] >gi|550813601|gb|ERT05054.1| aminotransferase class-V family protein [Lyngbya aestuarii BL J])

HSP 1 Score: 378.637 bits (971), Expect = 9.094e-122
Identity = 228/558 (40.86%), Postives = 321/558 (57.53%), Query Frame = 0
Query:   54 DQSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVP---IESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLVDSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLLLEETPFPILKPPDRPKGGAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFKALATLVDKGKRDGSQDMAGEEASSFMTDFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRV 608
            DQ+K+P+++ L   A R  A F+ PGHK G G+ + L               V    V++ DLPE+PELDNLFAPEG I +A+ LAAE FG A++T FLVNGST G++AA+LA                      K+++PRNVH+S I+GLILSGA+PVFL P Y+  WD+ + +    IE+AL+Q        S++ AVL+V PTY G   +IEQ A +   + +PL+VDEAHG H  F               S   T AL  GADLVVQSTHK L A++Q +M+H  +G  +D   L     ALQ++QSSSP+Y+LLASLD AR Q+ +    G+  ++   KLA +A++LL +     +L  P+  K  +F  LDP RL+V     G++G+ ADE+L ++  V AELP  + LTF +  G+ + DI+ LV  F  L+ ++                  F T  P F      +  ++  PR+A+  AS+  S ND   VG  SAE VCPYPPGIP+L+PGE I+ + + +L  VLS G ++TGCSDP+L  +++
Sbjct:    3 DQTKTPLLDTLKTLANRPHAAFYAPGHKRGNGINLLL-------------QNVLGSQVFKADLPELPELDNLFAPEGVIDEAQQLAAEAFG-AEQTRFLVNGSTGGIIAAILATC----------------GTGDKIIMPRNVHQSVISGLILSGAIPVFLQPEYNADWDLTYCITPQAIETALKQY-------SDIKAVLIVYPTYQGICGNIEQIAKITHDYNIPLLVDEAHGPHFYF--------------HSDLPTAALTAGADLVVQSTHKVLGAMTQASMLHI-QGNRIDRNRL---NQALQMIQSSSPSYLLLASLDAARQQMAT---QGQELMNHTLKLADQARKLLDKIPGISVLNLPEN-KQDSFWDLDPTRLSVNVSNLGLTGYQADEILHQQLQVTAELPNLKHLTFIISLGNTKADIEQLVKGFTQLSAMI----------------PDFQTISPEFPLPPVFSSVVRFSPREAFEGASQRRSVND--CVGCISAEMVCPYPPGIPILMPGEQISADAINYLHKVLSVGATITGCSDPTLETLKI 483          
BLAST of EWM27635.1 vs. NCBI_GenBank
Match: gi|505005057|ref|WP_015192159.1| (arginine decarboxylase [Stanieria cyanosphaera] >gi|428268545|gb|AFZ34486.1| arginine decarboxylase [Stanieria cyanosphaera PCC 7437])

HSP 1 Score: 376.326 bits (965), Expect = 7.943e-121
Identity = 229/563 (40.67%), Postives = 329/563 (58.44%), Query Frame = 0
Query:   55 QSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLVDSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLL--------LEETPFPILKPPDRPKGGAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFKALATLVDKGKRDGSQDMAGEEASSFMTDFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRVL 609
            QS++P+V+ L   + +  A F+ PGHK G+G+             A N T +  + V++ DLPE+P+LDNLFAPEG I++A+ LAAE FG AQ+TWFL+NGST G++AA+LA  +                   K++LPRN+H+SAI GLILSGA+P+F++P YD   D+ + +    +L+Q L++H    +  AV+++ PTY G   D+   A +  ++ +PL+VDEAHGAH AF       P ++ P        AL+ GADL VQSTHK L+A++Q +M+H     +  S     +  ALQL+QS+SPNY+LLASLD AR Q+   L G R  +++  +LAA A++ L        LE  P P            F  LDP RLTV     G++G++ADE+L ++ GV AELP  + LTF +  G+  EDI+ LV AFK L+                  + S    F P      A  SL   PR+A+F  SE ++   ++  GR  AE +CPYPPGIP+L+PGEIIT E + +L+ VL+ GG ++GCSDP+L  I+V+
Sbjct:   11 QSQTPLVDCLKSLSQQPDAAFYAPGHKKGQGI-------------ASNLTDILGNSVFKVDLPELPQLDNLFAPEGVIKEAQHLAAELFG-AQQTWFLINGSTCGIIAAILATCKTG----------------DKIILPRNIHQSAIAGLILSGAIPIFINPEYDSQQDLAYSI-TSVSLKQTLQQHP---DTKAVMVLYPTYQGVGGDLAAIAQITHQYDIPLLVDEAHGAHFAF------HP-DLPP-------SALSLGADLTVQSTHKVLSAMTQASMLHLQGNRIAPSR----ISQALQLLQSTSPNYILLASLDAARQQMA--LSGDRL-MNQTLELAAIARKQLSAIPGISCLELIPSP-----------GFSYLDPTRLTVNVTQLGLTGYEADEILDQQLGVTAELPLLKHLTFIISLGNTTEDINQLVNAFKTLSL-----------------SPSPFIHFSPTPLFSLAPLSL--SPREAFFATSETIAI--KKSSGRICAELICPYPPGIPILMPGEIITSEAIDYLQTVLTLGGKISGCSDPNLTTIQVI 486          
BLAST of EWM27635.1 vs. NCBI_GenBank
Match: gi|1210196629|dbj|BAZ15683.1| (Orn/Lys/Arg decarboxylase [Calothrix sp. NIES-4071] >gi|1210242811|dbj|BAZ61830.1| Orn/Lys/Arg decarboxylase [Calothrix sp. NIES-4105])

HSP 1 Score: 375.941 bits (964), Expect = 1.066e-120
Identity = 231/562 (41.10%), Postives = 323/562 (57.47%), Query Frame = 0
Query:   51 HGADQSKSPIVEALSLAAARIKAPFFFPGHKMGRGLPVGLPGPFAETNTALNKTRVHRDDVWQHDLPEIPELDNLFAPEGPIRDAETLAAETFGGAQRTWFLVNGSTAGVLAALLALVRRHQQEGQQHPARSGRSIQSKVLLPRNVHKSAINGLILSGAVPVFLSPVYDPAWDICHGVPIESALQQALEEHASGSEVAAVLLVSPTYHGAVMDIEQAALLCAKFKVPLIVDEAHGAHLAFLEVEVNEPGNVGPLASRAMTGALAQGADLVVQSTHKTLTAVSQCAMMHAGKGPLVDSAMLEFVGSALQLVQSSSPNYVLLASLDGARWQLGSPLGGGRAALHRAQKLAAKAKRLLLEETP---FPILKPPDRPKGGAFVGLDPLRLTVGTMGTGMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGSEEEDIDCLVAAFKALATLVDKGKRDGSQDMAGEEASSFMTDFPPFDGKQAAAGSLKCGPRDAYFTASEVLSTNDERVVGRASAETVCPYPPGIPVLLPGEIITVEVLRFLKGVLSTGGSVTGCSDPSLGKIRVL 609
            + A Q+++P++ AL   A    APF+ PGHK G G+   L   F ++             V+  DLPE+ ELDNLFAPEG I +A+ LAAE FG A RTWFLVNGST G+ AA++A               +G     K++LPRNVH S I GLILSGA+P+F++P YD   DI H +  ES +  AL +H    +  AVL+V PTY+G   D+ + A +  ++ +PLI+DEAHGAH AF       P    P++       LA GAD+ VQSTHKTL A++Q +M+H  +G +V+    + +   LQLVQS+SP+Y+L+ASLD AR Q+      G + + +  + A  A RL + + P    P L PP +   G F+ LD  RLT+     G++GF+ADE+L  +  V +EL + + LTF +  G+ ++DID L+ AF  LA +    K +             +T         A+   L   PR+AYF ASE L    ++   R SAET+CPYPPGIPVL+PGEIIT E L +L+ V   GG +TGCSD +L  ++V+
Sbjct:    3 NSASQAQTPLLTALYECAKSSHAPFYTPGHKRGVGISPSLIDVFGKS-------------VFTADLPELTELDNLFAPEGVIDEAQQLAAEAFGAA-RTWFLVNGSTCGIEAAIMA------------TCNAG----DKIILPRNVHSSVIAGLILSGAIPIFINPEYDAVLDIAHSITPES-VAVALHQH---PDAKAVLMVYPTYYGVCGDVAKIANIVHQYNIPLILDEAHGAHFAF------HPD--LPIS------GLAAGADICVQSTHKTLGAMTQASMLHV-QGNIVN---YDRISKVLQLVQSTSPSYILMASLDAARAQMAL---HGNSLITQTLQFAHTA-RLNINKIPGLSTP-LSPPYQALLGGFINLDATRLTINVSNLGITGFEADEILETQLAVRSELASLQNLTFIISIGNTQQDIDKLIQAFNTLAGMAPVSKNNTK-----------LTSAKILYSLTASNSILHISPREAYFAASETLPL--DQTYSRISAETICPYPPGIPVLMPGEIITKEALEYLQKVKVLGGFLTGCSDTTLKTLKVI 494          
The following BLAST results are available for this feature:
BLAST of EWM27635.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109905|gb|EWM27635.1|0.000e+0100.00Orn/Lys/Arg decarboxylase [Nannochloropsis gaditan... [more]
gi|298715386|emb|CBJ27997.1|3.903e-13243.36decarboxylase [Ectocarpus siliculosus][more]
gi|516330251|ref|WP_017720910.1|2.088e-13045.34hypothetical protein [Oscillatoria sp. PCC 10802][more]
gi|808797286|ref|WP_046279676.1|1.094e-12942.63lysine decarboxylase [Limnoraphis robusta] >gi|807... [more]
gi|737152000|ref|WP_035138904.1|7.290e-12340.97arginine decarboxylase [Fischerella muscicola][more]
gi|501591856|ref|WP_012595621.1|1.688e-12241.80lysine decarboxylase [Cyanothece sp. PCC 8801] >gi... [more]
gi|506264362|ref|WP_015784137.1|2.358e-12241.62lysine decarboxylase [Cyanothece sp. PCC 8802] >gi... [more]
gi|553734094|ref|WP_023068718.1|9.094e-12240.86aminotransferase class-V family protein [Lyngbya a... [more]
gi|505005057|ref|WP_015192159.1|7.943e-12140.67arginine decarboxylase [Stanieria cyanosphaera] >g... [more]
gi|1210196629|dbj|BAZ15683.1|1.066e-12041.10Orn/Lys/Arg decarboxylase [Calothrix sp. NIES-4071... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3028rna3028Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications