EWM27671.1, cds3003 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27671.1 vs. NCBI_GenBank
Match: gi|585109942|gb|EWM27671.1| (hypothetical protein Naga_100125g12 [Nannochloropsis gaditana]) HSP 1 Score: 897.116 bits (2317), Expect = 0.000e+0 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0 Query: 1 MFRAATSTNDSGSTGGDEASCSWLSASSDPSVPAAALTRTGGDGTTLFEAKRVMALCLLSLVSLAAGAPCPIDDGGWSTSRSKTLTGFLRPSTSAPVTPLCGGFRPGQRRELLSPRGVSYTGTSTGSSHMSSPVVVQLNHSSVAITEESSAYALPPSQAAARRRALPKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRWPSLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQNRGEMDRSGRIALERSCTDEDESAGGGKCGKSEASFGLWLKGCKVVLFCISGTMFWLVEHSLLERSTVPSRHCGSVFLDRKISFSTRKLRF 437 MFRAATSTNDSGSTGGDEASCSWLSASSDPSVPAAALTRTGGDGTTLFEAKRVMALCLLSLVSLAAGAPCPIDDGGWSTSRSKTLTGFLRPSTSAPVTPLCGGFRPGQRRELLSPRGVSYTGTSTGSSHMSSPVVVQLNHSSVAITEESSAYALPPSQAAARRRALPKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRWPSLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQNRGEMDRSGRIALERSCTDEDESAGGGKCGKSEASFGLWLKGCKVVLFCISGTMFWLVEHSLLERSTVPSRHCGSVFLDRKISFSTRKLRF Sbjct: 1 MFRAATSTNDSGSTGGDEASCSWLSASSDPSVPAAALTRTGGDGTTLFEAKRVMALCLLSLVSLAAGAPCPIDDGGWSTSRSKTLTGFLRPSTSAPVTPLCGGFRPGQRRELLSPRGVSYTGTSTGSSHMSSPVVVQLNHSSVAITEESSAYALPPSQAAARRRALPKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRWPSLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQNRGEMDRSGRIALERSCTDEDESAGGGKCGKSEASFGLWLKGCKVVLFCISGTMFWLVEHSLLERSTVPSRHCGSVFLDRKISFSTRKLRF 437
BLAST of EWM27671.1 vs. NCBI_GenBank
Match: gi|553180477|ref|XP_005853410.1| (hypothetical protein NGA_0260102 [Nannochloropsis gaditana CCMP526] >gi|422295650|gb|EKU22949.1| hypothetical protein NGA_0260102 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 730.709 bits (1885), Expect = 0.000e+0 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0 Query: 1 MFRAATSTNDSGSTGGDEASCSWLSASSDPSVPAAALTRTGGDGTTLFEAKRVMALCLLSLVSLAAGAPCPIDDGGWSTSRSKTLTGFLRPSTSAPVTPLCGGFRPGQRRELLSPRGVSYTGTSTGSSHMSSPVVVQLNHSSVAITEESSAYALPPSQAAARRRALPKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRWPSLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQNRGEMDRSGR 356 MFRAATSTNDSGSTGGDEASCSWLSASSDPSVPAAALTRTGGDGTTLFEAKRVMALCLLSLVSLAAGAPCPIDDGGWSTSRSKTLTGFLRPSTSAPVTPLCGGFRPGQRRELLSPRGVSYTGTSTGSSHMSSPVVVQLNHSSVAITEESSAYALPPSQAAARRRALPKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRWPSLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQNRGEMDRSGR Sbjct: 1 MFRAATSTNDSGSTGGDEASCSWLSASSDPSVPAAALTRTGGDGTTLFEAKRVMALCLLSLVSLAAGAPCPIDDGGWSTSRSKTLTGFLRPSTSAPVTPLCGGFRPGQRRELLSPRGVSYTGTSTGSSHMSSPVVVQLNHSSVAITEESSAYALPPSQAAARRRALPKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRWPSLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQNRGEMDRSGR 356
BLAST of EWM27671.1 vs. NCBI_GenBank
Match: gi|1072224186|gb|OEU08938.1| (hypothetical protein FRACYDRAFT_249280 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 154.066 bits (388), Expect = 1.279e-38 Identity = 84/206 (40.78%), Postives = 120/206 (58.25%), Query Frame = 0 Query: 167 PKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKI-------------------TSRW------PSLTKGVFTLSKFRFRLSVVHKHAPEEN--RLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVE 345 P P LP L+ E I L G+R+Q Q R G GSGYVV+D+ A +W LL FE Y ++IPT+R +++ T R PS+T+ F LSKFR ++ +HK+ P N + F LDP C +L+ A+G WY E+ P R +G+TRVY+ A+++++ +P ++VDYAAERA+ RAT+WLKP VE Sbjct: 202 PLPFELPKLTVEQKIKLVNGKRIQEQSRMGREGSGYVVLDIEAAPYVIWECLLDFESYPELIPTVRAMQLYTSTKLNTGFVNEKPVLPGTGRETRHYGTPSITRASFILSKFRLNIAAIHKYTPHPNGDYMEFTLDPSCTNV--VLKGAKGTWYTEENPDGR-KGFTRVYLLASLQISRALPKFIVDYAAERAMPRATNWLKPEVE 404
BLAST of EWM27671.1 vs. NCBI_GenBank
Match: gi|223995163|ref|XP_002287265.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976381|gb|EED94708.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 142.51 bits (358), Expect = 1.292e-33 Identity = 85/233 (36.48%), Postives = 122/233 (52.36%), Query Frame = 0 Query: 141 SSVAITEESSAYALPPSQAAARRRALPKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSR--------------------------WPSLTKGVFTLSKFRFRLSVVHKHAPEEN--RLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVE 345 SS T S Y+ A R + P LP L + L G+RVQ+Q G GSG+VV DV A S+ VW+ LL F+ Y IPT+R+V + + PS+T+ F+LSKFR +++ +H + P N + F LDP +L+ A+G W+ + P D EG+TRV++ ++V+ L+P W+VDYAA RA+ RAT+WLKP VE Sbjct: 305 SSSQTTPASKKYSKTKVSATFARSSETLPFELPKLDSKQYRQLMNGERVQYQDDMGLAGSGFVVWDVKAPSSVVWDCLLDFKSYPQTIPTVREVTMYTNTHLKEDYRAEKPLDFEDGTAAICKHGIPSVTRAQFSLSKFRLKIAAMHTYRPHSNGDYMVFTLDPASTNM--VLKYAKGIWHTQSNP-DGKEGYTRVWLLCELRVSKLLPQWIVDYAAARAMPRATTWLKPQVE 534
BLAST of EWM27671.1 vs. NCBI_GenBank
Match: gi|1210529208|dbj|GAX12354.1| (hypothetical protein FisN_1Hh287 [Fistulifera solaris]) HSP 1 Score: 139.043 bits (349), Expect = 2.764e-33 Identity = 76/213 (35.68%), Postives = 114/213 (53.52%), Query Frame = 0 Query: 167 PKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRW-------------------------PSLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQNRGEMDRS 354 P P +LP LS E L AG+R+Q Q + G GSG+VVVDV A VW LL FE Y + I T+R +++ + S+++ F LSK++ +++ +HK+ P + D ++L+ A+G WY + P R TRV++ ++KV+ L+P ++VDYAA RA+ RAT+WLKP VEQ E+ RS Sbjct: 187 PLPFSLPSLSDEQRKQLAAGERIQEQSKMGREGSGFVVVDVNAPPYVVWECLLDFENYPEYIKTVRSMRMFTNTHLASSYLAEDPVLPESTRAMRHYGTASISRASFVLSKYQLKIAAIHKYQPHPDGHYMVFTLDRANKGAVLQDAKGIWYTQRNPDGRGPNVTRVWLLCSLKVSKLLPTFIVDYAANRAMPRATTWLKPTVEQKYSEIQRS 399
BLAST of EWM27671.1 vs. NCBI_GenBank
Match: gi|1210520158|dbj|GAX21041.1| (hypothetical protein FisN_1Lh287 [Fistulifera solaris]) HSP 1 Score: 139.043 bits (349), Expect = 3.090e-33 Identity = 76/213 (35.68%), Postives = 114/213 (53.52%), Query Frame = 0 Query: 167 PKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRW-------------------------PSLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQNRGEMDRS 354 P P +LP LS E L AG+R+Q Q + G GSG+VVVDV A VW LL FE Y + I T+R +++ + S+++ F LSK++ +++ +HK+ P + D ++L+ A+G WY + P R TRV++ ++KV+ L+P ++VDYAA RA+ RAT+WLKP VEQ E+ RS Sbjct: 190 PLPFSLPSLSDEQRKQLAAGERIQEQSKMGREGSGFVVVDVNAPPYVVWECLLDFENYPEYIKTVRSMRMFTNTHLASSYLAEDPVLPESTKAMRHYGTASISRASFVLSKYQLKIAAIHKYQPHPDGHYMVFTLDRANKGAVLQDAKGIWYTQRNPDGRGPNVTRVWLLCSLKVSKLLPTFIVDYAANRAMPRATTWLKPTVEQKYSEIQRS 402
BLAST of EWM27671.1 vs. NCBI_GenBank
Match: gi|298706076|emb|CBJ29186.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 134.42 bits (337), Expect = 2.204e-31 Identity = 86/178 (48.31%), Postives = 110/178 (61.80%), Query Frame = 0 Query: 172 LPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRWP---SLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQY-RSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVE 345 LP L EDL LRAGQRVQ Q R G GSG VVVDV AD V L +E YA+MI T+R+ ++ + S GV +S+F+ + VV E N + F LDPDC + R++L A GF+Y+E P DRP G++RV+M A V VN VP +VDYAA RAL RA++W+KP E Sbjct: 241 LPLLDDEDLTQLRAGQRVQKQTRQGGSGSGSVVVDVRADPDVVLGLLTKYEDYAEMIDTVRECEVFPQGETADSRKVGVM-VSRFKLHIRVVMSLLRERNMVQFELDPDCTKAGRAVLREATGFFYVES-PPDRP-GFSRVWMLAKVDVNRFVPGAIVDYAAGRALPRASNWIKPTCE 415
BLAST of EWM27671.1 vs. NCBI_GenBank
Match: gi|219126873|ref|XP_002183672.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404909|gb|EEC44854.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 131.339 bits (329), Expect = 5.527e-30 Identity = 78/233 (33.48%), Postives = 120/233 (51.50%), Query Frame = 0 Query: 149 SSAYALPPSQAAARRRALPKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRW-------------------------PSLTKGVFTLSKFRFRLSVVHKHAPEENR--LNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQNRGEMDRS 354 S+ +P S + P P LP LS + L G+R+Q Q + G GSGYVV+DV A VW LL FE Y + I T+R ++I + S+T+ F LSKF+ ++ +HK+ P + + F LD C+ +L+ A+G W+ + P R TRV++ VKV+S++P ++V+Y A+RA+ RAT+WL+P VEQ + R+ Sbjct: 217 SADTGIPDSDDNDNKTIEPLPFALPNLSSQQRRALANGERIQEQSKMGREGSGYVVLDVEAPPYVVWECLLDFEAYPENIGTVRSMRIFTNTHLKSSYIAEKPLLPGTGKETRHYGNASVTRANFVLSKFQLNIAAIHKYVPHPDGHFMEFTLDKACKNV--VLQDAKGIWHTQSNPDGRGAHVTRVWLLCEVKVSSVLPSFIVEYTAKRAMPRATTWLRPLVEQKASQWLRT 447
BLAST of EWM27671.1 vs. NCBI_GenBank
Match: gi|1129162644|gb|OLP75831.1| (hypothetical protein AK812_SmicGene44312 [Symbiodinium microadriaticum]) HSP 1 Score: 117.472 bits (293), Expect = 7.237e-27 Identity = 73/190 (38.42%), Postives = 103/190 (54.21%), Query Frame = 0 Query: 170 TNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKI----TSRWPSLTKGV-FTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQNRGEMDRS 354 + LP LS + LR+G+RVQ Q R G G G V DV A ++ V L F Y MIP +RK + + +LT + +S+F +S+VH + +E + F LDP +L+ GFWY+E A +G RV++ + + +P WL+DYA++RAL RATSWLKP VEQ EM S Sbjct: 47 SELPELSSSEQQRLRSGRRVQRQTREGPKGQGLVAFDVRAPASVVLERLADFANYPSMIPVVRKAVVHLSHVADDGTLTAHCSYRISRFYLGVSIVHSVSRDEGLVRFDLDPTVSAM--MLQEVTGFWYVEALDA---QGACRVWLKVDLHAANWLPHWLIDYASKRALTRATSWLKPNVEQLWSEMQSS 231
BLAST of EWM27671.1 vs. NCBI_GenBank
Match: gi|1129207623|gb|OLQ09486.1| (hypothetical protein AK812_SmicGene6879 [Symbiodinium microadriaticum]) HSP 1 Score: 109.383 bits (272), Expect = 1.162e-23 Identity = 71/211 (33.65%), Postives = 104/211 (49.29%), Query Frame = 0 Query: 141 SSVAITEESSAYALPPSQAAARRRALPKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRWPS-----LTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQYRSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQ 346 +S + S A+A+ +Q A A P L L+ E+ +LR RVQ Q + G G G V ++V A V L F +Y DM+ IR ++ S PS + K + +++F F + VH R++F +DPD +L A GFW + P + G RV + L+P WLV+Y A + LKRATSWLKP+ E+ Sbjct: 36 ASSVMASRSRAWAVVATQGDAWLEAKNFPRQLWDLTAEEHQVLRDAGRVQKQAQLGNRGWGLVRINVRAPDHVVLRCLSNFRQYPDMMSAIRAAEVNSTSPSADAAMVAKCTYRITRFWFEIPAVHHVDQRRGRVSFDIDPDATGL--VLREASGFWQVV--PCRQNPGECRVVFRVYAHASKLMPEWLVEYGARKCLKRATSWLKPFAEK 242 The following BLAST results are available for this feature:
BLAST of EWM27671.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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