|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100125g12.434.mrna |
| Orig protein id | gnl|cribi|Naga_100125g12.434 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:469314..471009 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3011 ID=rna3011|Name=rna3011|organism=Nannochloropsis gaditana|type=mRNA|length=297bp
ATGGGTCTGCCCACCGCGCAAGCGAAGACATTCGATGTTATATTGACTGG
GAAAGTAATGCCGGATCGGCCTCGCATATCACGGCACCAAGGAACTTCGA
AAAGGCGCGCTCTGAGGAGAGAGCGAGAGAGACAGACCAAAAAATGCTTT
TCGAGCGATGACTGGGAAAAAGTGCAGCTAACAGATTTCGCATTCAGGAA
ATTGGAGTCAGTATCTCCTCGAAATTATAAGCTTGAATTGCAAGGGGTGT
GGAAACAACAGACGTCAAACACCACTGATAACTCTGTCACGAAATAA back to topprotein sequence of rna3011 >rna3011-protein ID=rna3011-protein|Name=rna3011|organism=Nannochloropsis gaditana|type=polypeptide|length=437bp
MFRAATSTNDSGSTGGDEASCSWLSASSDPSVPAAALTRTGGDGTTLFEA
KRVMALCLLSLVSLAAGAPCPIDDGGWSTSRSKTLTGFLRPSTSAPVTPL
CGGFRPGQRRELLSPRGVSYTGTSTGSSHMSSPVVVQLNHSSVAITEESS
AYALPPSQAAARRRALPKPTNLPGLSKEDLILLRAGQRVQHQIRNGCVGS
GYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSRWPSLTKGVFTL
SKFRFRLSVVHKHAPEENRLNFYLDPDCQQYRSILEMAEGFWYIEDQPAD
RPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVEQNRGE
MDRSGRIALERSCTDEDESAGGGKCGKSEASFGLWLKGCKVVLFCISGTM
FWLVEHSLLERSTVPSRHCGSVFLDRKISFSTRKLRF back to topmRNA from alignment at CM002460.1:469314..471009- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3011 ID=rna3011|Name=rna3011|organism=Nannochloropsis gaditana|type=mRNA|length=1696bp|location=Sequence derived from alignment at CM002460.1:469314..471009- (Nannochloropsis gaditana)
ATGTTTAGAGCAGCGACAAGCACCAATGACAGCGGCAGCACGGGTGGAGA
CGAAGCGTCTTGTTCTTGGCTGTCTGCCTCGTCAGACCCCTCTGTTCCAG
CTGCTGCTCTGACGCGGACTGGGGGAGACGGCACGACATTATTTGAGGCC
AAGCGGGTCATGGCATTGTGCCTTTTGTCGCTGGTCAGTCTAGCTGCGGG
GGCACCTTGCCCGATTGATGATGGTGGATGGTCAACATCCAGATCGAAAA
CGTTGACCGGCTTCCTTCGGCCGTCCACCTCGGCGCCTGTCACCCCGCTC
TGTGGTGGGTTCCGCCCCGGACAACGGCGGGAGCTTTTGTCACCGAGAGG
TGTGAGCTATACGGGAACTAGCACAGGGTCGAGCCATATGTCCAGCCCGG
TGGTTGTCCAGCTCAATCATTCCTCGGTTGCCATCACGGTGAGTCACGCG
CCGTCGTCTCCCGTCCGGGAATCTGAGGGATTCGATTCTGTTTGTCCAGC
GATCGCTTTCTATTTACACGTGTGTCCACATACTCGGCCCTTAAAACTGT
CCTCCTCCCCCCCCCCTTTTTTTCTGCTCTTTTCTGCAGGAGGAGTCCTC
CGCCTACGCCTTGCCCCCCTCCCAAGCAGCGGCGCGTCGACGGGCGTTGC
CGAAGCCGACAAACCTCCCAGGACTGAGCAAAGAGGACCTCATATTGCTG
CGAGCTGGCCAACGTGTGCAGCATCAGATCCGCAATGGCTGCGTGGGTAG
CGGGTATGTCGTTGTGGACGTGCTGGCGGACAGCGCCACGGTCTGGAACA
CGCTCCTGGGCTTCGAGCGCTACGCGGACATGATTCCCACCATTCGCAAG
GTCAAGATCACCTCCCGGTGGCCGTCCTTGACCAAGGGAGTCTTCACACT
CTCCAAGTTCCGCTTCCGCCTCTCGGTCGTCCACAAGCACGCGCCTGAGG
AGGTGCGTTCTGGTGGAGGATGCAGAGAAAGGAGCTCAAAGGGATTCCTG
ATCTTGGTCGAGCCCGGACGGATTCCTGGATATAGTCTGACTCTGTCATC
TACTCATTGTGTTGTGTTTCATATTCTTTCCCTCCTCACAAGAATCGCCT
GAACTTCTACCTCGACCCCGACTGCCAGCAGTACCGCAGCATCTTGGAGA
TGGCGGAGGGATTCTGGTACATCGAGGATCAACCTGCGGATCGACCGGAG
GGTTGGACGCGGGTCTACATGTCGGCGACTGTCAAGGTCAACAGCCTGGT
GCCCATGTGGCTGGTGGACTACGCGGCCGAGCGGGCGCTGAAACGGGCGA
CCTCGTGGTTGAAGCCCTATGTAGAACAGAACAGGGGGGAGATGGACAGG
AGCGGAAGGTGAAGGGCTTTCAACTCAAAGGAAAAGAATGTACAGTCAAC
TAGCTTAGGATTGCATTAGAGCGTTCTTGTACTGATGAGGATGAGTCGGC
AGGAGGAGGAAAATGTGGGAAATCGGAGGCTTCTTTTGGATTATGGTTGA
AAGGCTGTAAGTTTTGAAAGTAATCGCAGCGTTGAGTGCGCTGCTATTCA
GGGTGGTGTTGTTTTGTATTAGTGGCACGATGTTTTGGCTGGTTGAGCAT
TCGCTGCTAGAACGTAGTACAGTTCCCTCAAGGCACTGTGGCTCAGTGTT
TCTTGACCGGAAAATATCCTTTTCGACGAGGAAGCTCAGGTTTTGA back to topCoding sequence (CDS) from alignment at CM002460.1:469314..471009- >rna3011 ID=rna3011|Name=rna3011|organism=Nannochloropsis gaditana|type=CDS|length=6570bp|location=Sequence derived from alignment at CM002460.1:469314..471009- (Nannochloropsis gaditana)
GGTGGTGTTGTTTTGTATTAGTGGCACGATGTTTTGGCTGGTTGAGCATT
CGCTGCTAGAACGTAGTACAGTTCCCTCAAGGCACTGTGGCTCAGTGTTT
CTTGACCGGAAAATATCCTTTTCGACGAGGAAGCTCAGGTTTTGAGATTG
CATTAGAGCGTTCTTGTACTGATGAGGATGAGTCGGCAGGAGGAGGAAAA
TGTGGGAAATCGGAGGCTTCTTTTGGATTATGGTTGAAAGGCTGTAAAAT
CGCCTGAACTTCTACCTCGACCCCGACTGCCAGCAGTACCGCAGCATCTT
GGAGATGGCGGAGGGATTCTGGTACATCGAGGATCAACCTGCGGATCGAC
CGGAGGGTTGGACGCGGGTCTACATGTCGGCGACTGTCAAGGTCAACAGC
CTGGTGCCCATGTGGCTGGTGGACTACGCGGCCGAGCGGGCGCTGAAACG
GGCGACCTCGTGGTTGAAGCCCTATGTAGAACAGAACAGGGGGGAGATGG
ACAGGAGCGGAAGGAGGAGTCCTCCGCCTACGCCTTGCCCCCCTCCCAAG
CAGCGGCGCGTCGACGGGCGTTGCCGAAGCCGACAAACCTCCCAGGACTG
AGCAAAGAGGACCTCATATTGCTGCGAGCTGGCCAACGTGTGCAGCATCA
GATCCGCAATGGCTGCGTGGGTAGCGGGTATGTCGTTGTGGACGTGCTGG
CGGACAGCGCCACGGTCTGGAACACGCTCCTGGGCTTCGAGCGCTACGCG
GACATGATTCCCACCATTCGCAAGGTCAAGATCACCTCCCGGTGGCCGTC
CTTGACCAAGGGAGTCTTCACACTCTCCAAGTTCCGCTTCCGCCTCTCGG
TCGTCCACAAGCACGCGCCTGAGGAGATGTTTAGAGCAGCGACAAGCACC
AATGACAGCGGCAGCACGGGTGGAGACGAAGCGTCTTGTTCTTGGCTGTC
TGCCTCGTCAGACCCCTCTGTTCCAGCTGCTGCTCTGACGCGGACTGGGG
GAGACGGCACGACATTATTTGAGGCCAAGCGGGTCATGGCATTGTGCCTT
TTGTCGCTGGTCAGTCTAGCTGCGGGGGCACCTTGCCCGATTGATGATGG
TGGATGGTCAACATCCAGATCGAAAACGTTGACCGGCTTCCTTCGGCCGT
CCACCTCGGCGCCTGTCACCCCGCTCTGTGGTGGGTTCCGCCCCGGACAA
CGGCGGGAGCTTTTGTCACCGAGAGGTGTGAGCTATACGGGAACTAGCAC
AGGGTCGAGCCATATGTCCAGCCCGGTGGTTGTCCAGCTCAATCATTCCT
CGGTTGCCATCACGGGTGGTGTTGTTTTGTATTAGTGGCACGATGTTTTG
GCTGGTTGAGCATTCGCTGCTAGAACGTAGTACAGTTCCCTCAAGGCACT
GTGGCTCAGTGTTTCTTGACCGGAAAATATCCTTTTCGACGAGGAAGCTC
AGGTTTTGAGATTGCATTAGAGCGTTCTTGTACTGATGAGGATGAGTCGG
CAGGAGGAGGAAAATGTGGGAAATCGGAGGCTTCTTTTGGATTATGGTTG
AAAGGCTGTAAAATCGCCTGAACTTCTACCTCGACCCCGACTGCCAGCAG
TACCGCAGCATCTTGGAGATGGCGGAGGGATTCTGGTACATCGAGGATCA
ACCTGCGGATCGACCGGAGGGTTGGACGCGGGTCTACATGTCGGCGACTG
TCAAGGTCAACAGCCTGGTGCCCATGTGGCTGGTGGACTACGCGGCCGAG
CGGGCGCTGAAACGGGCGACCTCGTGGTTGAAGCCCTATGTAGAACAGAA
CAGGGGGGAGATGGACAGGAGCGGAAGGAGGAGTCCTCCGCCTACGCCTT
GCCCCCCTCCCAAGCAGCGGCGCGTCGACGGGCGTTGCCGAAGCCGACAA
ACCTCCCAGGACTGAGCAAAGAGGACCTCATATTGCTGCGAGCTGGCCAA
CGTGTGCAGCATCAGATCCGCAATGGCTGCGTGGGTAGCGGGTATGTCGT
TGTGGACGTGCTGGCGGACAGCGCCACGGTCTGGAACACGCTCCTGGGCT
TCGAGCGCTACGCGGACATGATTCCCACCATTCGCAAGGTCAAGATCACC
TCCCGGTGGCCGTCCTTGACCAAGGGAGTCTTCACACTCTCCAAGTTCCG
CTTCCGCCTCTCGGTCGTCCACAAGCACGCGCCTGAGGAGATGTTTAGAG
CAGCGACAAGCACCAATGACAGCGGCAGCACGGGTGGAGACGAAGCGTCT
TGTTCTTGGCTGTCTGCCTCGTCAGACCCCTCTGTTCCAGCTGCTGCTCT
GACGCGGACTGGGGGAGACGGCACGACATTATTTGAGGCCAAGCGGGTCA
TGGCATTGTGCCTTTTGTCGCTGGTCAGTCTAGCTGCGGGGGCACCTTGC
CCGATTGATGATGGTGGATGGTCAACATCCAGATCGAAAACGTTGACCGG
CTTCCTTCGGCCGTCCACCTCGGCGCCTGTCACCCCGCTCTGTGGTGGGT
TCCGCCCCGGACAACGGCGGGAGCTTTTGTCACCGAGAGGTGTGAGCTAT
ACGGGAACTAGCACAGGGTCGAGCCATATGTCCAGCCCGGTGGTTGTCCA
GCTCAATCATTCCTCGGTTGCCATCACGGGTGGTGTTGTTTTGTATTAGT
GGCACGATGTTTTGGCTGGTTGAGCATTCGCTGCTAGAACGTAGTACAGT
TCCCTCAAGGCACTGTGGCTCAGTGTTTCTTGACCGGAAAATATCCTTTT
CGACGAGGAAGCTCAGGTTTTGAGATTGCATTAGAGCGTTCTTGTACTGA
TGAGGATGAGTCGGCAGGAGGAGGAAAATGTGGGAAATCGGAGGCTTCTT
TTGGATTATGGTTGAAAGGCTGTAAAATCGCCTGAACTTCTACCTCGACC
CCGACTGCCAGCAGTACCGCAGCATCTTGGAGATGGCGGAGGGATTCTGG
TACATCGAGGATCAACCTGCGGATCGACCGGAGGGTTGGACGCGGGTCTA
CATGTCGGCGACTGTCAAGGTCAACAGCCTGGTGCCCATGTGGCTGGTGG
ACTACGCGGCCGAGCGGGCGCTGAAACGGGCGACCTCGTGGTTGAAGCCC
TATGTAGAACAGAACAGGGGGGAGATGGACAGGAGCGGAAGGAGGAGTCC
TCCGCCTACGCCTTGCCCCCCTCCCAAGCAGCGGCGCGTCGACGGGCGTT
GCCGAAGCCGACAAACCTCCCAGGACTGAGCAAAGAGGACCTCATATTGC
TGCGAGCTGGCCAACGTGTGCAGCATCAGATCCGCAATGGCTGCGTGGGT
AGCGGGTATGTCGTTGTGGACGTGCTGGCGGACAGCGCCACGGTCTGGAA
CACGCTCCTGGGCTTCGAGCGCTACGCGGACATGATTCCCACCATTCGCA
AGGTCAAGATCACCTCCCGGTGGCCGTCCTTGACCAAGGGAGTCTTCACA
CTCTCCAAGTTCCGCTTCCGCCTCTCGGTCGTCCACAAGCACGCGCCTGA
GGAGATGTTTAGAGCAGCGACAAGCACCAATGACAGCGGCAGCACGGGTG
GAGACGAAGCGTCTTGTTCTTGGCTGTCTGCCTCGTCAGACCCCTCTGTT
CCAGCTGCTGCTCTGACGCGGACTGGGGGAGACGGCACGACATTATTTGA
GGCCAAGCGGGTCATGGCATTGTGCCTTTTGTCGCTGGTCAGTCTAGCTG
CGGGGGCACCTTGCCCGATTGATGATGGTGGATGGTCAACATCCAGATCG
AAAACGTTGACCGGCTTCCTTCGGCCGTCCACCTCGGCGCCTGTCACCCC
GCTCTGTGGTGGGTTCCGCCCCGGACAACGGCGGGAGCTTTTGTCACCGA
GAGGTGTGAGCTATACGGGAACTAGCACAGGGTCGAGCCATATGTCCAGC
CCGGTGGTTGTCCAGCTCAATCATTCCTCGGTTGCCATCACGGGTGGTGT
TGTTTTGTATTAGTGGCACGATGTTTTGGCTGGTTGAGCATTCGCTGCTA
GAACGTAGTACAGTTCCCTCAAGGCACTGTGGCTCAGTGTTTCTTGACCG
GAAAATATCCTTTTCGACGAGGAAGCTCAGGTTTTGAGATTGCATTAGAG
CGTTCTTGTACTGATGAGGATGAGTCGGCAGGAGGAGGAAAATGTGGGAA
ATCGGAGGCTTCTTTTGGATTATGGTTGAAAGGCTGTAAAATCGCCTGAA
CTTCTACCTCGACCCCGACTGCCAGCAGTACCGCAGCATCTTGGAGATGG
CGGAGGGATTCTGGTACATCGAGGATCAACCTGCGGATCGACCGGAGGGT
TGGACGCGGGTCTACATGTCGGCGACTGTCAAGGTCAACAGCCTGGTGCC
CATGTGGCTGGTGGACTACGCGGCCGAGCGGGCGCTGAAACGGGCGACCT
CGTGGTTGAAGCCCTATGTAGAACAGAACAGGGGGGAGATGGACAGGAGC
GGAAGGAGGAGTCCTCCGCCTACGCCTTGCCCCCCTCCCAAGCAGCGGCG
CGTCGACGGGCGTTGCCGAAGCCGACAAACCTCCCAGGACTGAGCAAAGA
GGACCTCATATTGCTGCGAGCTGGCCAACGTGTGCAGCATCAGATCCGCA
ATGGCTGCGTGGGTAGCGGGTATGTCGTTGTGGACGTGCTGGCGGACAGC
GCCACGGTCTGGAACACGCTCCTGGGCTTCGAGCGCTACGCGGACATGAT
TCCCACCATTCGCAAGGTCAAGATCACCTCCCGGTGGCCGTCCTTGACCA
AGGGAGTCTTCACACTCTCCAAGTTCCGCTTCCGCCTCTCGGTCGTCCAC
AAGCACGCGCCTGAGGAGATGTTTAGAGCAGCGACAAGCACCAATGACAG
CGGCAGCACGGGTGGAGACGAAGCGTCTTGTTCTTGGCTGTCTGCCTCGT
CAGACCCCTCTGTTCCAGCTGCTGCTCTGACGCGGACTGGGGGAGACGGC
ACGACATTATTTGAGGCCAAGCGGGTCATGGCATTGTGCCTTTTGTCGCT
GGTCAGTCTAGCTGCGGGGGCACCTTGCCCGATTGATGATGGTGGATGGT
CAACATCCAGATCGAAAACGTTGACCGGCTTCCTTCGGCCGTCCACCTCG
GCGCCTGTCACCCCGCTCTGTGGTGGGTTCCGCCCCGGACAACGGCGGGA
GCTTTTGTCACCGAGAGGTGTGAGCTATACGGGAACTAGCACAGGGTCGA
GCCATATGTCCAGCCCGGTGGTTGTCCAGCTCAATCATTCCTCGGTTGCC
ATCACGGGTGGTGTTGTTTTGTATTAGTGGCACGATGTTTTGGCTGGTTG
AGCATTCGCTGCTAGAACGTAGTACAGTTCCCTCAAGGCACTGTGGCTCA
GTGTTTCTTGACCGGAAAATATCCTTTTCGACGAGGAAGCTCAGGTTTTG
AGATTGCATTAGAGCGTTCTTGTACTGATGAGGATGAGTCGGCAGGAGGA
GGAAAATGTGGGAAATCGGAGGCTTCTTTTGGATTATGGTTGAAAGGCTG
TAAAATCGCCTGAACTTCTACCTCGACCCCGACTGCCAGCAGTACCGCAG
CATCTTGGAGATGGCGGAGGGATTCTGGTACATCGAGGATCAACCTGCGG
ATCGACCGGAGGGTTGGACGCGGGTCTACATGTCGGCGACTGTCAAGGTC
AACAGCCTGGTGCCCATGTGGCTGGTGGACTACGCGGCCGAGCGGGCGCT
GAAACGGGCGACCTCGTGGTTGAAGCCCTATGTAGAACAGAACAGGGGGG
AGATGGACAGGAGCGGAAGGAGGAGTCCTCCGCCTACGCCTTGCCCCCCT
CCCAAGCAGCGGCGCGTCGACGGGCGTTGCCGAAGCCGACAAACCTCCCA
GGACTGAGCAAAGAGGACCTCATATTGCTGCGAGCTGGCCAACGTGTGCA
GCATCAGATCCGCAATGGCTGCGTGGGTAGCGGGTATGTCGTTGTGGACG
TGCTGGCGGACAGCGCCACGGTCTGGAACACGCTCCTGGGCTTCGAGCGC
TACGCGGACATGATTCCCACCATTCGCAAGGTCAAGATCACCTCCCGGTG
GCCGTCCTTGACCAAGGGAGTCTTCACACTCTCCAAGTTCCGCTTCCGCC
TCTCGGTCGTCCACAAGCACGCGCCTGAGGAGATGTTTAGAGCAGCGACA
AGCACCAATGACAGCGGCAGCACGGGTGGAGACGAAGCGTCTTGTTCTTG
GCTGTCTGCCTCGTCAGACCCCTCTGTTCCAGCTGCTGCTCTGACGCGGA
CTGGGGGAGACGGCACGACATTATTTGAGGCCAAGCGGGTCATGGCATTG
TGCCTTTTGTCGCTGGTCAGTCTAGCTGCGGGGGCACCTTGCCCGATTGA
TGATGGTGGATGGTCAACATCCAGATCGAAAACGTTGACCGGCTTCCTTC
GGCCGTCCACCTCGGCGCCTGTCACCCCGCTCTGTGGTGGGTTCCGCCCC
GGACAACGGCGGGAGCTTTTGTCACCGAGAGGTGTGAGCTATACGGGAAC
TAGCACAGGGTCGAGCCATATGTCCAGCCCGGTGGTTGTCCAGCTCAATC
ATTCCTCGGTTGCCATCACG back to top
|