EWM27678.1, cds2990 (CDS) Nannochloropsis gaditana

Overview
NameEWM27678.1
Unique Namecds2990
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:447675..447762 -
Alignment locationCM002460.1:447386..447524 -
Alignment locationCM002460.1:447061..447181 -

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Properties
Property NameValue
Protein idEWM27678.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100104g22.5941.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:447675..447762 -
CM002460.1supercontigCM002460.1:447386..447524 -
CM002460.1supercontigCM002460.1:447061..447181 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27678.1 vs. NCBI_GenBank
Match: gi|585109950|gb|EWM27678.1| (hypothetical protein Naga_100104g22 [Nannochloropsis gaditana])

HSP 1 Score: 238.039 bits (606), Expect = 1.278e-79
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 
Query:    1 MNHKSSFKEKCRRKRRKTKALERSHALSDGKCVQSVPLASREEDSPAHSHFQDFCTLREVRPFPDFLRRLSETRNGQFDSRGSINHYLIVRPEVKAKSYGIHTFVENLVRQKFPT 115
            MNHKSSFKEKCRRKRRKTKALERSHALSDGKCVQSVPLASREEDSPAHSHFQDFCTLREVRPFPDFLRRLSETRNGQFDSRGSINHYLIVRPEVKAKSYGIHTFVENLVRQKFPT
Sbjct:    1 MNHKSSFKEKCRRKRRKTKALERSHALSDGKCVQSVPLASREEDSPAHSHFQDFCTLREVRPFPDFLRRLSETRNGQFDSRGSINHYLIVRPEVKAKSYGIHTFVENLVRQKFPT 115
The following BLAST results are available for this feature:
BLAST of EWM27678.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109950|gb|EWM27678.1|1.278e-79100.00hypothetical protein Naga_100104g22 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2998rna2998Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications