EWM27689.1, cds2983 (CDS) Nannochloropsis gaditana

Overview
NameEWM27689.1
Unique Namecds2983
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:431111..432454 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27689.1
Product26s proteasome subunit 4
Orig transcript idgnl|cribi|Naga_100104g13.5952.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:431111..432454 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
GO:0016787hydrolase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0019538protein metabolic process
GO:0030163protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR003960ATPase_AAA_CS
IPR00593726S_Psome_P45
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Homology
BLAST of EWM27689.1 vs. NCBI_GenBank
Match: gi|585109961|gb|EWM27689.1| (26s proteasome subunit 4 [Nannochloropsis gaditana])

HSP 1 Score: 897.116 bits (2317), Expect = 0.000e+0
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0
Query:    1 MGQGTPGGMPPPGGQLPGQGDQKKEDKAKKKKFEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447
            MGQGTPGGMPPPGGQLPGQGDQKKEDKAKKKKFEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL
Sbjct:    1 MGQGTPGGMPPPGGQLPGQGDQKKEDKAKKKKFEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447          
BLAST of EWM27689.1 vs. NCBI_GenBank
Match: gi|298712577|emb|CBJ33278.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 753.051 bits (1943), Expect = 0.000e+0
Identity = 367/415 (88.43%), Postives = 401/415 (96.63%), Query Frame = 0
Query:   33 FEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447
            FEPRP +R+G+++R+KGPS AVR PQVFPT+KC+LRLLKL+RIKDFL+LE E+IRNQEVF+P EEKDQEER KV++LRGSPL+VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQDLLEPGS+VLLHNKVM+VVGIL DD DPMVSVMKV+KAPLE+YADIGGLESQIQEIKE+VELPLTHPELYEDIGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAD++SP++VFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTL++DVDLE+F+MAKDELSGADIKA+CTE+GLLALRERRMKVT DDF KAKEKALYRKKGN+P  +YL
Sbjct:   32 FEPRPPMRTGKKKRKKGPSVAVRTPQVFPTAKCRLRLLKLERIKDFLMLEKEYIRNQEVFKPREEKDQEERQKVDDLRGSPLSVGTLEEMIDDNHAIVSSSVGPEYYVNVMSFVNQDLLEPGSSVLLHNKVMSVVGILGDDADPMVSVMKVDKAPLETYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADEMSPTLVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLADDVDLEIFIMAKDELSGADIKAICTESGLLALRERRMKVTMDDFTKAKEKALYRKKGNVPEGLYL 446          
BLAST of EWM27689.1 vs. NCBI_GenBank
Match: gi|1173947896|gb|OQR96066.1| (choline/Carnitine O-acyltransferase [Thraustotheca clavata])

HSP 1 Score: 746.117 bits (1925), Expect = 0.000e+0
Identity = 360/433 (83.14%), Postives = 400/433 (92.38%), Query Frame = 0
Query:   16 LPG-QGDQKKEDKAKKKKFEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447
            LPG + ++KKED  K+KKFEPR    + +R+++KGPS A RIP VFPT+KCKLRLLKL+RIKDFLL+E EFI+NQEV +P +EKD+EER+KV+++RG+P+ VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQD+LE G +VLLHNKVMAVVGILS+DTDPMVSVMKV+KAPLESYADIGGL+ QIQEIKE+VELPLTHPELYE IGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPD+KTKRRIF IHT RM+LSEDV+LE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +Y 
Sbjct:  479 LPGAKKNEKKEDAPKRKKFEPRGGAMTRKRKKKKGPSVATRIPAVFPTAKCKLRLLKLERIKDFLLMEEEFIKNQEVMKPKQEKDEEERSKVDDIRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVSVMSFVNQDMLEAGCSVLLHNKVMAVVGILSNDTDPMVSVMKVDKAPLESYADIGGLDQQIQEIKEAVELPLTHPELYEGIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDVKTKRRIFAIHTSRMSLSEDVELEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQTDFRKAKEKALYKKKANIPEGLYF 911          
BLAST of EWM27689.1 vs. NCBI_GenBank
Match: gi|1173945067|gb|OQR93739.1| (26S protease regulatory subunit 4 [Achlya hypogyna])

HSP 1 Score: 743.421 bits (1918), Expect = 0.000e+0
Identity = 367/447 (82.10%), Postives = 405/447 (90.60%), Query Frame = 0
Query:    1 MGQGTPGGMPPPGGQLPGQGDQKKEDKAKKKKFEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447
            MGQG  G    PG + P    +KK+D  K+KKFEPR    + +R+++KGPS A RIP VFPT+KCKLRLLKL+RIKDFLLLE EFI+NQEV +P +EKD+EER+KV++LRG+P+ VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQD+LE G +VLLHNKVMAVVGILS+DTDPMVSVMKV+KAPLESYADIGGL+ QIQEIKE+VELPLTHPELYE IGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPD+KTKRRIF IHT RM+LS+DV+LE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:    1 MGQGQSG---LPGSKKP----EKKDDAPKRKKFEPRAGAMTRKRKKKKGPSVATRIPAVFPTAKCKLRLLKLERIKDFLLLEEEFIKNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVSVMSFVNQDMLEAGCSVLLHNKVMAVVGILSNDTDPMVSVMKVDKAPLESYADIGGLDQQIQEIKEAVELPLTHPELYEGIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDVKTKRRIFAIHTSRMSLSDDVELEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQSDFRKAKEKALYKKKANIPEGLYL 440          
BLAST of EWM27689.1 vs. NCBI_GenBank
Match: gi|635364004|emb|CCI47533.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 740.725 bits (1911), Expect = 0.000e+0
Identity = 366/450 (81.33%), Postives = 407/450 (90.44%), Query Frame = 0
Query:    1 MGQGTPGGMPPPGGQLPGQGDQKK---EDKAKKKKFEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447
            MGQ   G        LP +G +KK   + + KKKKFEPR  V + +RR++KGPSAAVRIP V+PT+KCKLRLLKL+RIKDFLL+E EFI+NQEV +P  EKD+EER+KV++LRG+P+ VG LEE+IDDNHAIVSSSVGPEYYV V+SFVNQD+LE G +VLLHNKVM+VVGILSDDTDPMVSVMKV+KAPLESYADIGGL++QIQEIKE+VELPLTHPELYE IGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVA+DL+PSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATN I+SLDPALIRPGRIDRKIEFPLPD KTKRRIF IHTGRM+LS+DVDLE F+M+KDELSGADIKA+CTEAGLLALRERRM+VT  DF KAKEKALYRKK NIP  +YL
Sbjct:    1 MGQSQSG--------LPREGARKKKPDDAEKKKKKFEPRSGVMTHKRRKKKGPSAAVRIPTVYPTAKCKLRLLKLERIKDFLLMEQEFIQNQEVMKPKHEKDEEERSKVDDLRGNPMGVGTLEEIIDDNHAIVSSSVGPEYYVSVMSFVNQDMLETGCSVLLHNKVMSVVGILSDDTDPMVSVMKVDKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEGIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVAEDLAPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIQSLDPALIRPGRIDRKIEFPLPDTKTKRRIFQIHTGRMSLSDDVDLEEFIMSKDELSGADIKAICTEAGLLALRERRMRVTHVDFAKAKEKALYRKKANIPEGLYL 442          
BLAST of EWM27689.1 vs. NCBI_GenBank
Match: gi|325187094|emb|CCA21636.1| (26S proteasome AAAATPase subunit RPT2a putative [Albugo laibachii Nc14])

HSP 1 Score: 739.569 bits (1908), Expect = 0.000e+0
Identity = 363/447 (81.21%), Postives = 405/447 (90.60%), Query Frame = 0
Query:    1 MGQGTPGGMPPPGGQLPGQGDQKKEDKAKKKKFEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447
            MGQ +  G+P    +   Q D +K    KKKKFEPR    + +RR++KGPSAAVRIP V+PT+KCKLRLLKL+RIKDFLL+E EFI+NQEV +P  EKD+EER+KV++LRG+P++VG LEE+IDDNHAIVSSSVGPEYYV V+SFVNQD+LE G +VLLHNKVM+VVGILSDDTDPMVSVMKV+KAPLESYADIGGL++QIQEIKE+VELPLTHPELYE IGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVA+DL+PSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATN I+SLDPALIRPGRIDRKIEFPLPD KTKRRIF IHTGRM+L +DVDLE F+M+KDELSGADIKA+CTEAGLLALRERRM+VT  DF KAKEKALYRKK NIP  +YL
Sbjct:    1 MGQ-SQSGLPREAARKKQQDDAEK----KKKKFEPRSGAMTHKRRKKKGPSAAVRIPTVYPTAKCKLRLLKLERIKDFLLMEQEFIQNQEVMKPKHEKDEEERSKVDDLRGNPMSVGTLEEIIDDNHAIVSSSVGPEYYVSVMSFVNQDMLETGCSVLLHNKVMSVVGILSDDTDPMVSVMKVDKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEGIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVAEDLAPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNSIQSLDPALIRPGRIDRKIEFPLPDTKTKRRIFQIHTGRMSLGDDVDLEEFIMSKDELSGADIKAICTEAGLLALRERRMRVTHVDFAKAKEKALYRKKANIPEGLYL 442          
BLAST of EWM27689.1 vs. NCBI_GenBank
Match: gi|813156446|ref|XP_012201572.1| (26S proteasome regulatory subunit 4 A [Saprolegnia parasitica CBS 223.65] >gi|641533824|gb|KDO27797.1| 26S proteasome regulatory subunit 4 A [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 738.413 bits (1905), Expect = 0.000e+0
Identity = 365/448 (81.47%), Postives = 405/448 (90.40%), Query Frame = 0
Query:    1 MGQGTPGGMPPPGGQLPGQGDQKKEDKA-KKKKFEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447
            MGQG  G        LPG    +K+D+A K+KKFEPR    + +R+++KGPS A RIP VFPT+KCKLRLLKL+RIKDFLL+E EFI+NQEV +P +EKD+EER+KV++LRG+P+ VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQD+LE G +VLLHNKVMAVVGILS+DTDPMVSVMKV+KAPLESYADIGGL+ QIQEIKE+VELPLTHPELYE IGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPD+KTKRRIF IHT RM+LS+DV+LE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:    1 MGQGQSG--------LPGSKKPEKKDEAPKRKKFEPRGGAMTRKRKKKKGPSVATRIPAVFPTAKCKLRLLKLERIKDFLLMEEEFIKNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVSVMSFVNQDMLEAGCSVLLHNKVMAVVGILSNDTDPMVSVMKVDKAPLESYADIGGLDQQIQEIKEAVELPLTHPELYEGIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDVKTKRRIFAIHTSRMSLSDDVELEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQTDFRKAKEKALYKKKANIPEGLYL 440          
BLAST of EWM27689.1 vs. NCBI_GenBank
Match: gi|669140498|ref|XP_008605817.1| (26S proteasome regulatory subunit 4 like A [Saprolegnia diclina VS20] >gi|530742731|gb|EQC40973.1| 26S proteasome regulatory subunit 4 like A [Saprolegnia diclina VS20])

HSP 1 Score: 738.413 bits (1905), Expect = 0.000e+0
Identity = 365/448 (81.47%), Postives = 405/448 (90.40%), Query Frame = 0
Query:    1 MGQGTPGGMPPPGGQLPGQGDQKKEDKA-KKKKFEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447
            MGQG  G        LPG    +K+D+A K+KKFEPR    + +R+++KGPS A RIP VFPT+KCKLRLLKL+RIKDFLL+E EFI+NQEV +P +EKD+EER+KV++LRG+P+ VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQD+LE G +VLLHNKVMAVVGILS+DTDPMVSVMKV+KAPLESYADIGGL+ QIQEIKE+VELPLTHPELYE IGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPD+KTKRRIF IHT RM+LS+DV+LE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:    1 MGQGQSG--------LPGNKKPEKKDEAPKRKKFEPRGGAMTRKRKKKKGPSVATRIPAVFPTAKCKLRLLKLERIKDFLLMEEEFIKNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVSVMSFVNQDMLEAGCSVLLHNKVMAVVGILSNDTDPMVSVMKVDKAPLESYADIGGLDQQIQEIKEAVELPLTHPELYEGIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDVKTKRRIFAIHTSRMSLSDDVELEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQTDFRKAKEKALYKKKANIPEGLYL 440          
BLAST of EWM27689.1 vs. NCBI_GenBank
Match: gi|301103434|ref|XP_002900803.1| (26S protease regulatory subunit 4 [Phytophthora infestans T30-4] >gi|262101558|gb|EEY59610.1| 26S protease regulatory subunit 4 [Phytophthora infestans T30-4])

HSP 1 Score: 738.028 bits (1904), Expect = 0.000e+0
Identity = 358/415 (86.27%), Postives = 393/415 (94.70%), Query Frame = 0
Query:   33 FEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447
            FEPR    + +RR++KGPSAAVRIP V+PT+KCKLRLLK++RIKDFLL+E EFI+NQEV +P +EKD+EER+KV++LRG+P+ VG LEEMIDDNHAIVSSSVGPEYYVGV+SFVNQD+LEPG +VLLHNKVM+VVGIL+DDTDPMVSVMKV+KAPLESYADIGGLESQIQEIKE+VELPLTHPELYE IGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLR+VGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRM+L +DVDLE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   31 FEPRGGAMTRKRRKKKGPSAAVRIPTVYPTAKCKLRLLKMERIKDFLLMEQEFIQNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVGVMSFVNQDMLEPGCSVLLHNKVMSVVGILADDTDPMVSVMKVDKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEGIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMSLGDDVDLEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQSDFRKAKEKALYKKKANIPEGLYL 445          
BLAST of EWM27689.1 vs. NCBI_GenBank
Match: gi|953486384|emb|CEG49715.1| (26s protease regulatory subunit 4 [Plasmopara halstedii])

HSP 1 Score: 737.258 bits (1902), Expect = 0.000e+0
Identity = 356/413 (86.20%), Postives = 391/413 (94.67%), Query Frame = 0
Query:   35 PRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447
            PR    + +RR++KGPSAAVRIP V+PT+KCKLRLLK++RIKDFLL+E EFI+NQEV +P +EKD+EER+KV++LRG+P+ VG LEEMIDDNHAIVSSSVGPEYYVGV+SFVNQD+LEPG +VLLHNKVM+VVGIL+DD DPMVSVMKV+KAPLESYADIGGLESQIQEIKE+VELPLTHPELYE IGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLR+VGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRM+L+EDVDLE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   33 PRGGAMTRKRRKKKGPSAAVRIPTVYPTAKCKLRLLKMERIKDFLLMEQEFIQNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVGVMSFVNQDMLEPGCSVLLHNKVMSVVGILADDADPMVSVMKVDKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEGIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMSLAEDVDLEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQSDFRKAKEKALYKKKANIPEGLYL 445          
The following BLAST results are available for this feature:
BLAST of EWM27689.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109961|gb|EWM27689.1|0.000e+0100.0026s proteasome subunit 4 [Nannochloropsis gaditana... [more]
gi|298712577|emb|CBJ33278.1|0.000e+088.43conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173947896|gb|OQR96066.1|0.000e+083.14choline/Carnitine O-acyltransferase [Thraustotheca... [more]
gi|1173945067|gb|OQR93739.1|0.000e+082.1026S protease regulatory subunit 4 [Achlya hypogyna... [more]
gi|635364004|emb|CCI47533.1|0.000e+081.33unnamed protein product [Albugo candida][more]
gi|325187094|emb|CCA21636.1|0.000e+081.2126S proteasome AAAATPase subunit RPT2a putative [A... [more]
gi|813156446|ref|XP_012201572.1|0.000e+081.4726S proteasome regulatory subunit 4 A [Saprolegnia... [more]
gi|669140498|ref|XP_008605817.1|0.000e+081.4726S proteasome regulatory subunit 4 like A [Saprol... [more]
gi|301103434|ref|XP_002900803.1|0.000e+086.2726S protease regulatory subunit 4 [Phytophthora in... [more]
gi|953486384|emb|CEG49715.1|0.000e+086.2026s protease regulatory subunit 4 [Plasmopara hals... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2991rna2991Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications