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Properties
| Property Name | Value |
|---|
| Product | 26s proteasome subunit 4 |
| Orig transcript id | gnl|cribi|Naga_100104g13.5952.mrna |
| Orig protein id | gnl|cribi|Naga_100104g13.5952 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:430926..432600 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2991 ID=rna2991|Name=rna2991|organism=Nannochloropsis gaditana|type=mRNA|length=582bp
ATGTCATCATCAAGCAGCCGCTCTGCTGCCACTCGCGCAGGGGATCAAGC
CTGGACCAAGATGAGCAAAATGAATGCCGAATTATTTAATCTCACATACG
GGGCCATGGTCATGCAGCTGATTCGAGACTACGAGGACGTGCAAGCCGTA
AATCAACAACTTGAGACGATGGGGTATAGCATCGGCCAGAAACTCGTCGA
CGAGTTCCTCGCCAAGTCTGGTGTTGGCAACTGTGCCAATTTCCGTGAAG
TTGCTGAGACGCTGGCGAAAGTAGGGTTTAAAATGTTTTTGGGGGTAGTG
GTGGAGGTGACGGCTTGGAATGCCGAAGGCACAGCTTTCAGTTTGCAGGT
GTATGACAATCCGCTGGCGGACTTTGTGGAGCTCCCACCTCAATACTCTG
GCTTGGTCTATTCAAACATATTGTGTGGCGTGATACGGGGGGCGTTGGAG
ATGATCAAATACCAGGTCGAGTGCCGGTTTGTGAAGGACGGGTTGAAAGG
TGACGAGGTGAATGAAATCAGGGTGGAGTTGAGGCAGATGGTGGACGAGA
GTTTCGGAGAAGAGTACAATGAGGGCGCGTGA back to topprotein sequence of rna2991 >rna2991-protein ID=rna2991-protein|Name=rna2991|organism=Nannochloropsis gaditana|type=polypeptide|length=447bp
MGQGTPGGMPPPGGQLPGQGDQKKEDKAKKKKFEPRPAVRSGRRRRRKGP
SAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQ
EERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDL
LEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQ
IQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQT
SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSK
RYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIR
PGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGA
DIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL back to topmRNA from alignment at CM002460.1:430926..432600+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2991 ID=rna2991|Name=rna2991|organism=Nannochloropsis gaditana|type=mRNA|length=1675bp|location=Sequence derived from alignment at CM002460.1:430926..432600+ (Nannochloropsis gaditana)
GGTGCTTTACGCACCCAGCCGCAGGGAGATGGTGAAGAAGAGAAGCAACG
TCGAACTGAAATTTGATCGTTGAAGCATTTGTGGCCCTGGTATATGGGTT
TTCACTGTCTTTGAGCTCACTTTACGCCTTGAACGCCCctcacctctccc
ccttttaACACACATGGAATTGTACTGCCAGAGCAATGGGGCAAGGGACT
CCAGGAGGcatgcctccaccaggcGGTCAACTGCCAGGCCAGGGTGAtca
gaagaaggaggacaaggcaaagaagaagaagttcGAACCTCGGCCCGCCG
TGCGGAGTGGCCGGCGTCGCCGTCGTAAGGGCCCCTCGGCTGCCGTTCGG
ATCCCCCAGGTCTTTCCAACCTCGAAATGCAAGCTCAGACTGTTGAAATT
GGATCGGATCAAAGACTTCCTGCTGCTTGAGGGGGAATTCATCCGCAATC
AAGAGGTGTTCCGCCCTCATGAGGAaaaggaccaggaggagcgggcgaaA
GTGGAGGAGCTTCGAGGGAGTCCGCTGGCGGTGGGCAATCTGGAGGAGAT
GATCGATGACAATCACGCTATCGTTTCCTCGTCGGTCGGGCCCGAGTATT
ACGTGGGCGTGCTGTCATTTGTTAACCAGGACTTGCTGGAACCGGGCTCC
ACAGTCCTCTTGCACAACAAGGTGATGGCGGTGGTCGGCATCCTCTCGGA
CGACACGGACCCGATGGTGTCTGTCATGAAGGTAGAAAAGGCGCCCTTGG
AGTCTTACGCGGACATTGGTGGGCTGGAGTCGCAGATTCAGGAGATCAAG
GAGTCAGTGGAGCTGCCCTTGACCCACCCCGAGCTCTACGAGGACATCGG
CATCCGCCCGCCCAAGGGAGTCATCCTCTACGGGGAGCCCGGCACCGGCA
AGACTCTTCtggccaaggccgtggcCAACCAGACGTCGGCGACCTTCTTG
CGAGTGGTGGGCTCGGAGCTGATTCAGAAGTACCTCGGGGATGGACCCAA
GCTGGTGCGTGAACTCTTCCGGGTGGCTGACGAcctgtcgccctccatcg
tcttcaTCGACGAGATCGACGCCGTTGGCTCCAAGCGTTACGATTCGAAC
TCGGGGGGCACGCGAGAGATCCAGCGGACGATGCTGGAGCTCTTGAACCA
GCTGGACGGCTTCGACGAGCGAGGAGACGTCAAGGTGATCATGGCCACCA
ACAAGATCGAATCCTTGGACCCCGCGCTCATTCGGCCTGGGCGCATCGAC
CGGAAGATCGAATTCCCCTTGCCGGACATCAAGACAAAGCGGCGCATCTT
CGGGATCCACACGGGGCGCATGACCCTCtcggaggacgtggacctGGAGG
TGTTCGTCATGGCCAAGGACGAGCTCTCCGGCGCCGACATCAAGGCGGTG
TGCACGGAGGCCGGACTGCTGGCActccgggagaggaggatgaaggtgaC
GCAGGACGACTTTGTCAAGGCCAAAGAAAAGGCGTTGTACCGGAAGAAGG
GCAACATCCCCGTATCCATGTACCtgtaagagggaggagggggagggcat
tgGCCggttggggggggcgcggccaGCACAAGGAGTGTATGAAGCAGCTC
ACGAAGACCCCAACGTAGGAAGGGCAAATAAAGGGCGACCAAAAAAGAAG
ACACGTgcaaagaggcgaggagggg back to topCoding sequence (CDS) from alignment at CM002460.1:430926..432600+ >rna2991 ID=rna2991|Name=rna2991|organism=Nannochloropsis gaditana|type=CDS|length=1344bp|location=Sequence derived from alignment at CM002460.1:430926..432600+ (Nannochloropsis gaditana)
ATGGGGCAAGGGACTCCAGGAGGcatgcctccaccaggcGGTCAACTGCC
AGGCCAGGGTGAtcagaagaaggaggacaaggcaaagaagaagaagttcG
AACCTCGGCCCGCCGTGCGGAGTGGCCGGCGTCGCCGTCGTAAGGGCCCC
TCGGCTGCCGTTCGGATCCCCCAGGTCTTTCCAACCTCGAAATGCAAGCT
CAGACTGTTGAAATTGGATCGGATCAAAGACTTCCTGCTGCTTGAGGGGG
AATTCATCCGCAATCAAGAGGTGTTCCGCCCTCATGAGGAaaaggaccag
gaggagcgggcgaaAGTGGAGGAGCTTCGAGGGAGTCCGCTGGCGGTGGG
CAATCTGGAGGAGATGATCGATGACAATCACGCTATCGTTTCCTCGTCGG
TCGGGCCCGAGTATTACGTGGGCGTGCTGTCATTTGTTAACCAGGACTTG
CTGGAACCGGGCTCCACAGTCCTCTTGCACAACAAGGTGATGGCGGTGGT
CGGCATCCTCTCGGACGACACGGACCCGATGGTGTCTGTCATGAAGGTAG
AAAAGGCGCCCTTGGAGTCTTACGCGGACATTGGTGGGCTGGAGTCGCAG
ATTCAGGAGATCAAGGAGTCAGTGGAGCTGCCCTTGACCCACCCCGAGCT
CTACGAGGACATCGGCATCCGCCCGCCCAAGGGAGTCATCCTCTACGGGG
AGCCCGGCACCGGCAAGACTCTTCtggccaaggccgtggcCAACCAGACG
TCGGCGACCTTCTTGCGAGTGGTGGGCTCGGAGCTGATTCAGAAGTACCT
CGGGGATGGACCCAAGCTGGTGCGTGAACTCTTCCGGGTGGCTGACGAcc
tgtcgccctccatcgtcttcaTCGACGAGATCGACGCCGTTGGCTCCAAG
CGTTACGATTCGAACTCGGGGGGCACGCGAGAGATCCAGCGGACGATGCT
GGAGCTCTTGAACCAGCTGGACGGCTTCGACGAGCGAGGAGACGTCAAGG
TGATCATGGCCACCAACAAGATCGAATCCTTGGACCCCGCGCTCATTCGG
CCTGGGCGCATCGACCGGAAGATCGAATTCCCCTTGCCGGACATCAAGAC
AAAGCGGCGCATCTTCGGGATCCACACGGGGCGCATGACCCTCtcggagg
acgtggacctGGAGGTGTTCGTCATGGCCAAGGACGAGCTCTCCGGCGCC
GACATCAAGGCGGTGTGCACGGAGGCCGGACTGCTGGCActccgggagag
gaggatgaaggtgaCGCAGGACGACTTTGTCAAGGCCAAAGAAAAGGCGT
TGTACCGGAAGAAGGGCAACATCCCCGTATCCATGTACCtgtaa back to top
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