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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100034g34.6312.mrna |
Orig protein id | gnl|cribi|Naga_100034g34.6312 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002460.1 | supercontig | CM002460.1:326927..329262 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2946 ID=rna2946|Name=rna2946|organism=Nannochloropsis gaditana|type=mRNA|length=1630bp GGCATGGAGCTTTTCGCCACTTCTGCAATGTACGGCCATCCTCCCCATGA TCTCTCTCCTTTTCAAATCAAAGGTGTGACACTTTCACCACCAAGAATAT TTGGTGGCGGCCGACTCAAAAACTTTTTTGTGTTTTCTTTTCCAATAGAA AAAAGTAGTAGTAAAGTAGTAGGCCGAGGAGTTAACCTCCCCTCCTTACT TCCTCCATGCCAGGATAAAGAAAAACAAGTTGAGGAGAACCTGGATAAGG ATGTACAGGGTGTGCGATGTGACCAAACATCGGGCATGGACCAAGTGACA AGTTTAAAAAGACATGAGACAACTCGTGCGGGTGGCAGCCAACGAAACAA GAGCATTAAAACATGGCCTTGTGTCGGAAAGTGGCCAGAGATGCTACCGA TATGAAGTGACATTATCATTTGGTTTAAGCCGCGGAAACGAGAAATTTGC AGGTTGACCTGACCGTTTCAGATCAGCAAATTAGCCAGACGACGGCAGTG TTCGAACGCGCAAAAATGAATCGAGCCGTCTACATGTTGTAGGCTATACC AGATTTGTTGCGGACGGCGATAGAGGGCTTTAAGATCCGGAGGAAGGCTT AGGAATTAAGTGTGCGAAGGCGGGGAAGGCATTCAAAGGTTAAGGCACAG ATTGATTCAGTTCAAGTATCCCTTACAGCCAGTGACAAGGATGTCAGATT GGCGCCTTCGCACGTCTTCCTACTCAACAAGTTGGACAGCAGGATCGGCA GGCTCTGTTTGACGCTGGTTCGTCAAAACCTCGATGTTTCCACCGCCATT TTCCTCAGCTAATTGCGCCAGACTTGCCCCTTGAGCTTGACGAGCCAACT CTAAGTCAATGGTGGAGAGGAGGCGCTGCTCCTCGTCGGTGTACTGCTTG ACACCAGTTCGAGGCGTGACCTGTATGAGAGCGTCCCGTCGGATCTATTT TGTGGTTGTCAGGTAAAGGTAAATTAATTTAAGGTATGTTCCCTGCTGAA AAGAATGGGGTAAAGAATATTTGTTGGCTTGTTTGTCCCTTTCCTCGCAA CATTGACAGGATTTCGACGCATCTCTCACCTGGCTGCCAGCGATTGCGAC AGGTTTCGAGATTCCAAAGCCCAAAAGATCATTTTCATTGGCGGTGGAAA ATTTTCCATCAAGATCCAAAAGCGCGGAAATACCCAGGTCGTCAAAAGCA CGATTGTCTTTCTCCCAAGTTTCCTTGGTCAAAGGAAAGAGCAGATTATT GAAAGTCAACTCGAAATTGTAGGGAAACTGCAGCCCTCGCAATTGAATTC TGGTTTGCAGCGGATGAAGTACGAAAGAAGTGAGTAGTTTGTAAGCAATC GTCACCCCAAAACCCATCCATCTATCTATGTATCCGTCAGTCAGTAAGCT CACTTTTTTGCAGCAACTGGTCCACCTTCTCTACCGTAACAAGTGATAAG AAGCGCCGCATTGTCATTCTCAAGCGCATAATTGATAACCCCGGGACGTT CGGGTCCTAACGGATAGCCCTCGATCTCGGGCAGCCGCACAGTGCCCTGA TTGTGGGAAACGCAAGCTTGAGACATGAGTAATAATACAAACCCCTTCGA TGAATCTTGCACAAATCACCTTTGCAATTA back to topprotein sequence of rna2946 >rna2946-protein ID=rna2946-protein|Name=rna2946|organism=Nannochloropsis gaditana|type=polypeptide|length=223bp MTNIFSLFLKCTTSFCCILLKHTMTIAVTSDRVLSFAGMVLGVAFGAFLL LFVQCEGFVPAGPQRLLTPQYPTPASMDATEPTFGRTLISLKSDQDLKET QNAAGVGISVMGRSLAVTGLFLSSFWGGGLEQVMAAPMATSRQQSTQRQE RPFGKTKKNALKEENKELTDVIAKVICARFIEGVCIITHVSSLRFPQSGH CAAARDRGLSVRTRTSRGYQLCA back to topmRNA from alignment at CM002460.1:326927..329262- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2946 ID=rna2946|Name=rna2946|organism=Nannochloropsis gaditana|type=mRNA|length=2336bp|location=Sequence derived from alignment at CM002460.1:326927..329262- (Nannochloropsis gaditana) TTAAGTCGCGAGTAGCGCGGGCTTCTACCCGGCGGAAGGAAAAACGCCCC
GCAAGTTGAGGGTCCCCGAGAGCATCTCTGTGCGTGCGAATGGGACATAT
TATCGGGTGAATCGGCGTAGTCAATCCCGGTAACCAGGCTTTTAGGCTCT
AGCGTACAATAAATCGTGAGACGGCCGCAGTCAGTCCAACGAAAGCTTTT
CTATCGGGTCACCGGCGATATGGGCATGGCGGCGTCCGAGGCGAGTGCGC
GGATGGTGAGGGCAAGCGAGCGGCAAGTGAGCAGTCAAGCTGCGGGCCCC
AGGCTTCCCCAGGACCCTCACGAAACTGTGAAGGTCGTGACAATTGTGAT
ATGGAGGCACAAAGCAGCAGTATTCTCGTATTGTGGGCGGTGCTCGATCA
ATTCGCTGGCACATGACAAACATTTTCTCCCTATTTCTGAAGTGCACAAC
GTCTTTCTGTTGTATCCTCTTAAAACACACTATGACCATCGCAGTGACAA
GCGACAGAGTGCTATCCTTTGCAGGGATGGTTTTGGGGGTTGCTTTCGGC
GCATTCCTGCTTCTTTTTGTCCAATGCGAGGGATTTGTCCCTGCAGGACC
TCAACGCCTTCTGACTCCTCAGTATCCCACTCCGGCCTCAATGGACGCCA
CTGAGCCGACGTTTGGCAGGACTCTCATTTCGCTGAAATCTGATCAAGAT
CTAAAGGAGACCCAAAATGCAGCTGGCGTCGGTATTTCCGTCATGGGACG
TTCTTTGGCTGTTACTGGCTTGTTCCTGTCTTCATTTTGGGGAGGAGGAC
TGGAGCAAGTGATGGCCGCTCCCATGGCAACTAGTAGGCAACAGAGCACG
CAGCGACAGGTGTGTACGCTCATTAGCGCCTTATTTGTCAGGAAATGTCT
GACGGAATATTCAAAACTCTCATATCGGACACACTGATTATCGTGCGTTT
TCTTTTCTGACACTTCACAGGAAAGACCTTTTGGCAAGACGAAAAAAAAT
GCACTGAAAGAAGAAAATAAGGAGCTAACTGACGTAATTGCAAAGGTGAT
TTGTGCAAGATTCATCGAAGGGGTTTGTATTATTACTCATGTCTCAAGCT
TGCGTTTCCCACAATCAGGGCACTGTGCGGCTGCCCGAGATCGAGGGCTA
TCCGTTAGGACCCGAACGTCCCGGGGTTATCAATTATGCGCTTGAGAATG
ACAATGCGGCGCTTCTTATCACTTGTTACGGTAGAGAAGGTGGACCAGTT
GCTGCAAAAAAGTGAGCTTACTGACTGACGGATACATAGATAGATGGATG
GGTTTTGGGGTGACGATTGCTTACAAACTACTCACTTCTTTCGTACTTCA
TCCGCTGCAAACCAGAATTCAATTGCGAGGGCTGCAGTTTCCCTACAATT
TCGAGTTGACTTTCAATAATCTGCTCTTTCCTTTGACCAAGGAAACTTGG
GAGAAAGACAATCGTGCTTTTGACGACCTGGGTATTTCCGCGCTTTTGGA
TCTTGATGGAAAATTTTCCACCGCCAATGAAAATGATCTTTTGGGCTTTG
GAATCTCGAAACCTGTCGCAATCGCTGGCAGCCAGGTGAGAGATGCGTCG
AAATCCTGTCAATGTTGCGAGGAAAGGGACAAACAAGCCAACAAATATTC
TTTACCCCATTCTTTTCAGCAGGGAACATACCTTAAATTAATTTACCTTT
ACCTGACAACCACAAAATAGATCCGACGGGACGCTCTCATACAGGTCACG
CCTCGAACTGGTGTCAAGCAGTACACCGACGAGGAGCAGCGCCTCCTCTC
CACCATTGACTTAGAGTTGGCTCGTCAAGCTCAAGGGGCAAGTCTGGCGC
AATTAGCTGAGGAAAATGGCGGTGGAAACATCGAGGTTTTGACGAACCAG
CGTCAAACAGAGCCTGCCGATCCTGCTGTCCAACTTGTTGAGTAGGAAGA
CGTGCGAAGGCGCCAATCTGACATCCTTGTCACTGGCTGTAAGGGATACT
GTCGTCGAAGGATATCAGTGTGAGGAAAACCCAAAGAAAAATGAGTTGTA
CAGCGATAAACTCTGGTAACTAGGTCCTAAACAGCACTCTACAGTAAAGA
AGAAACGCCTTCACTCGCCTTGAACTGAATCAATCTGTGCCTTAACCTTT
GAATGCCTTCCCCGCCTTCGCACACTTAATTCCTAAGCCTTCCTCCGGAT
CTTAAAGCCCTCTATCGCCGTCCGCAACAAATCTGGTATAGCCTACAACA
TGTAGACGGCTCGATTCATTTTTGCGCGTTCGAACACTGCCGTCGTCTGG
CTAATTTGCTGATCTGAAACGGTCAGGTCAACCTGC back to topCoding sequence (CDS) from alignment at CM002460.1:326927..329262- >rna2946 ID=rna2946|Name=rna2946|organism=Nannochloropsis gaditana|type=CDS|length=1344bp|location=Sequence derived from alignment at CM002460.1:326927..329262- (Nannochloropsis gaditana) GAAAGACCTTTTGGCAAGACGAAAAAAAATGCACTGAAAGAAGAAAATAA GGAGCTAACTGACGTAATTGCAAAGGTGATTTGTGCAAGATTCATCGAAG GGGTTTGTATTATTACTCATGTCTCAAGCTTGCGTTTCCCACAATCAGGG CACTGTGCGGCTGCCCGAGATCGAGGGCTATCCGTTAGGACCCGAACGTC CCGGGGTTATCAATTATGCGCTTGAATGACAAACATTTTCTCCCTATTTC TGAAGTGCACAACGTCTTTCTGTTGTATCCTCTTAAAACACACTATGACC ATCGCAGTGACAAGCGACAGAGTGCTATCCTTTGCAGGGATGGTTTTGGG GGTTGCTTTCGGCGCATTCCTGCTTCTTTTTGTCCAATGCGAGGGATTTG TCCCTGCAGGACCTCAACGCCTTCTGACTCCTCAGTATCCCACTCCGGCC TCAATGGACGCCACTGAGCCGACGTTTGGCAGGACTCTCATTTCGCTGAA ATCTGATCAAGATCTAAAGGAGACCCAAAATGCAGCTGGCGTCGGTATTT CCGTCATGGGACGTTCTTTGGCTGTTACTGGCTTGTTCCTGTCTTCATTT TGGGGAGGAGGACTGGAGCAAGTGATGGCCGCTCCCATGGCAACTAGTAG GCAACAGAGCACGCAGCGACAGGAAAGACCTTTTGGCAAGACGAAAAAAA ATGCACTGAAAGAAGAAAATAAGGAGCTAACTGACGTAATTGCAAAGGTG ATTTGTGCAAGATTCATCGAAGGGGTTTGTATTATTACTCATGTCTCAAG CTTGCGTTTCCCACAATCAGGGCACTGTGCGGCTGCCCGAGATCGAGGGC TATCCGTTAGGACCCGAACGTCCCGGGGTTATCAATTATGCGCTTGAATG ACAAACATTTTCTCCCTATTTCTGAAGTGCACAACGTCTTTCTGTTGTAT CCTCTTAAAACACACTATGACCATCGCAGTGACAAGCGACAGAGTGCTAT CCTTTGCAGGGATGGTTTTGGGGGTTGCTTTCGGCGCATTCCTGCTTCTT TTTGTCCAATGCGAGGGATTTGTCCCTGCAGGACCTCAACGCCTTCTGAC TCCTCAGTATCCCACTCCGGCCTCAATGGACGCCACTGAGCCGACGTTTG GCAGGACTCTCATTTCGCTGAAATCTGATCAAGATCTAAAGGAGACCCAA AATGCAGCTGGCGTCGGTATTTCCGTCATGGGACGTTCTTTGGCTGTTAC TGGCTTGTTCCTGTCTTCATTTTGGGGAGGAGGACTGGAGCAAGTGATGG CCGCTCCCATGGCAACTAGTAGGCAACAGAGCACGCAGCGACAG back to top
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