EWM27739.1, cds2938 (CDS) Nannochloropsis gaditana

Overview
NameEWM27739.1
Unique Namecds2938
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:328404..328850 -
Alignment locationCM002460.1:328068..328292 -

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Properties
Property NameValue
Protein idEWM27739.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100034g34.6312.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:328404..328850 -
CM002460.1supercontigCM002460.1:328068..328292 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM27739.1 vs. NCBI_GenBank
Match: gi|585110012|gb|EWM27739.1| (hypothetical protein Naga_100034g34 [Nannochloropsis gaditana])

HSP 1 Score: 458.373 bits (1178), Expect = 2.987e-163
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 
Query:    1 MTNIFSLFLKCTTSFCCILLKHTMTIAVTSDRVLSFAGMVLGVAFGAFLLLFVQCEGFVPAGPQRLLTPQYPTPASMDATEPTFGRTLISLKSDQDLKETQNAAGVGISVMGRSLAVTGLFLSSFWGGGLEQVMAAPMATSRQQSTQRQERPFGKTKKNALKEENKELTDVIAKVICARFIEGVCIITHVSSLRFPQSGHCAAARDRGLSVRTRTSRGYQLCA 223
            MTNIFSLFLKCTTSFCCILLKHTMTIAVTSDRVLSFAGMVLGVAFGAFLLLFVQCEGFVPAGPQRLLTPQYPTPASMDATEPTFGRTLISLKSDQDLKETQNAAGVGISVMGRSLAVTGLFLSSFWGGGLEQVMAAPMATSRQQSTQRQERPFGKTKKNALKEENKELTDVIAKVICARFIEGVCIITHVSSLRFPQSGHCAAARDRGLSVRTRTSRGYQLCA
Sbjct:    1 MTNIFSLFLKCTTSFCCILLKHTMTIAVTSDRVLSFAGMVLGVAFGAFLLLFVQCEGFVPAGPQRLLTPQYPTPASMDATEPTFGRTLISLKSDQDLKETQNAAGVGISVMGRSLAVTGLFLSSFWGGGLEQVMAAPMATSRQQSTQRQERPFGKTKKNALKEENKELTDVIAKVICARFIEGVCIITHVSSLRFPQSGHCAAARDRGLSVRTRTSRGYQLCA 223
The following BLAST results are available for this feature:
BLAST of EWM27739.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110012|gb|EWM27739.1|2.987e-163100.00hypothetical protein Naga_100034g34 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2946rna2946Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications