EWM27704.1, cds2923 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27704.1 vs. NCBI_GenBank
Match: gi|585109977|gb|EWM27704.1| (CRAL-TRIO domain protein [Nannochloropsis gaditana]) HSP 1 Score: 739.569 bits (1908), Expect = 0.000e+0 Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0
Query: 1 MAPETSSEATAQVPREQPPARSDTATSHRHSTCHVQQAWCAGDQVATVDSHTTVETLSINGDSSSVEVTSLMERVDISHRPVPSLGNKASSEKNHSSSYFLDLPSVNHKAIFEELLAKITELAPEDNVPPYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKVHGQIERHSTQRFKVVVAPWNALGLADRRSLLVQPEHPEMSSFIVKITNLL 355
MAPETSSEATAQVPREQPPARSDTATSHRHSTCHVQQAWCAGDQVATVDSHTTVETLSINGDSSSVEVTSLMERVDISHRPVPSLGNKASSEKNHSSSYFLDLPSVNHKAIFEELLAKITELAPEDNVPPYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKVHGQIERHSTQRFKVVVAPWNALGLADRRSLLVQPEHPEMSSFIVKITNLL
Sbjct: 1 MAPETSSEATAQVPREQPPARSDTATSHRHSTCHVQQAWCAGDQVATVDSHTTVETLSINGDSSSVEVTSLMERVDISHRPVPSLGNKASSEKNHSSSYFLDLPSVNHKAIFEELLAKITELAPEDNVPPYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKVHGQIERHSTQRFKVVVAPWNALGLADRRSLLVQPEHPEMSSFIVKITNLL 355
BLAST of EWM27704.1 vs. NCBI_GenBank
Match: gi|585112881|gb|EWM30222.1| (cral trio domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 152.91 bits (385), Expect = 6.497e-41 Identity = 75/197 (38.07%), Postives = 121/197 (61.42%), Query Frame = 0
Query: 111 IFEELLAKITELAPEDNVPPYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTAD-GFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKVH 306
+ EL AKI A + ++ +L+R+L+AR+L V +A+ +W AWR+ +P+++ E AP L+ VS+ G DK GR C+ RNH+ + LR + +LE +T S +T+ G+I I D +G G +N+DT L KPG++ I++EYYPE L + I++++W+FR+ W +I PF+DE+T+ KVH
Sbjct: 14 VMAELGAKI---AQHPTLSHHSSPAVLSRMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVH 207
BLAST of EWM27704.1 vs. NCBI_GenBank
Match: gi|118360174|ref|XP_001013324.1| (divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210] >gi|89295091|gb|EAR93079.1| divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210]) HSP 1 Score: 135.191 bits (339), Expect = 4.801e-33 Identity = 77/211 (36.49%), Postives = 112/211 (53.08%), Query Frame = 0
Query: 102 DLPSVNHKAIFEELLAKITELAP-----EDNVP--PYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKV 305
DL KA F EL AK+ E ED V Y +++ R+L AR +V +AF MW V WR ++ + EE+ A L G G DKQG PC+ + H + D LR + LLE+ + + G ++VI D+EG +KN D+NLF L QI+Q+ Y ERL + YILH +W F+ ++A++ PFL +T+ K+
Sbjct: 16 DLKEKELKA-FNELKAKVVEQCKKMKLDEDQVKFDRYTEDNQCVRLLWAREFKVEKAFEMWKKWVDWRIDFKADEIKEEDVASELQSGKAFWHGMDKQGNPCLVVKVKYHRPGVSSQDVVLRYFLYLLEEGISKCEQAGTGKVSVIWDREGFDKKNFDSNLFSTFKKLNQIMQDNYAERLSTIYILHPNWFFKTIYAVVKPFLTSRTKSKI 225
BLAST of EWM27704.1 vs. NCBI_GenBank
Match: gi|1134886566|gb|OMJ83991.1| (hypothetical protein SteCoe_14977 [Stentor coeruleus]) HSP 1 Score: 130.954 bits (328), Expect = 1.509e-32 Identity = 67/193 (34.72%), Postives = 106/193 (54.92%), Query Frame = 0
Query: 114 ELLAKITELAPEDNVPPYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKVH 306
EL I E+ E+ Y ++D+L RVL AR+L+V A+ MW WRK Y+ ++EEE ++ G G D +GRPC+ R H + + +R ++ L+E+ + G + VI D+ + N D NL GL +LQ++Y ERLG+ YILH +W++ L++ + P L++KTR K+H
Sbjct: 17 ELTKLIHEITDEEK---YTNQDMLIRVLRARDLKVQPAYEMWQKWYRWRKDYRADEITEEEMKEHIKTGKAFFFGEDNEGRPCLIVRARYHWPNQFALEETMRYVIYLVEQGVKLADEKHTGQMCVIYDRGDISSANKDGNLIELGKGLAAMLQDFYAERLGAVYILHVNWLYWLIFQAVKPLLNKKTRNKIH 206
BLAST of EWM27704.1 vs. NCBI_GenBank
Match: gi|1134868678|gb|OMJ67334.1| (hypothetical protein SteCoe_35521 [Stentor coeruleus]) HSP 1 Score: 130.568 bits (327), Expect = 2.497e-32 Identity = 67/192 (34.90%), Postives = 106/192 (55.21%), Query Frame = 0
Query: 116 LAKITELAPE-DNVPPYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKVH 306
L+ +T L E + Y ++D+L RVL AR+L+V A+ MW WRK Y+ ++EEE ++ G G D +GRPC+ R H + + + +R ++ L+E+ + G I VI D+ + N D NL L +LQ++Y ERLG+ YILH +W++ L++ I P L++KTR K+H
Sbjct: 15 LSDLTNLVHEITDEEKYTNQDMLLRVLRARDLKVQAAYEMWQKWYKWRKDYRADEITEEEMKEHIKTGKAFFFGEDNEGRPCLIVRARYHWPNQFSLEETMRYVIYLVEQGVKLADERHTGQICVIYDRGDISSANKDGNLIELGKSLAAMLQDFYAERLGAVYILHVNWLYWLIFQAIKPLLNKKTRNKMH 206
BLAST of EWM27704.1 vs. NCBI_GenBank
Match: gi|118399667|ref|XP_001032158.1| (divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210] >gi|89286496|gb|EAR84495.1| divergent CRAL/TRIO domain protein (macronuclear) [Tetrahymena thermophila SB210]) HSP 1 Score: 120.939 bits (302), Expect = 4.384e-28 Identity = 75/221 (33.94%), Postives = 118/221 (53.39%), Query Frame = 0
Query: 105 SVNHKAI--FEELLAKI-----TELAPED--NVPPYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKVH--GQIERHST 314
S+N I F+EL KI T L P+D Y +++ R+L A++ V +AF MW ++WR + EE+ A +G G DKQ PC+ +NHI + D ++ ++ L+E+ +S G I++I D+EG KN+D LF L QI+Q+ Y ER+ YIL+ +W F+ ++A++ PFL E+T++KV QIE +T
Sbjct: 22 SLNEAQILKFKELKQKIIDEAHTLLCPKDVTKFERYTEDNQAVRLLWAQDFHVEKAFAMWQKWISWRLKIGADDIKEEDIAQEYQRGRAFWHGKDKQNNPCLVVKVKNHIPGV-SSDIMVKYVLFLIEEAIQKSEEAGTGMISIIWDREGFSIKNVDYKLFETFKSLNQIIQDNYAERIQKVYILYPNWFFKTIYALVKPFLTERTKQKVLFVDQIEDMTT 241
BLAST of EWM27704.1 vs. NCBI_GenBank
Match: gi|145502055|ref|XP_001437007.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124404153|emb|CAK69610.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 114.005 bits (284), Expect = 8.059e-26 Identity = 59/193 (30.57%), Postives = 107/193 (55.44%), Query Frame = 0
Query: 113 EELLAKITELAPEDNVPPYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKV 305
E + ++ +L ED V Y++ED L R+L+AR +V ++F W V WRK Y+ + EE ++ G DK G PC+ + H N ++ +R + ++++ ++ + G I+VI D+EGV KN D+++F +V ++Q+ Y ERL +IL+ +++ + + ++ PFL EKT+ K+
Sbjct: 23 ERVKVEVPKLVREDLVQKYSNEDHLIRLLIAREWKVNDSFDQWKRWVEWRKQYRADDIKIEEIQQEINLNKAFWNGSDKLGNPCLVVKAKRHFPGQSNPETLIRFFLYMIDQGIQKADQAGTGKISVIWDREGVTSKNFDSSMFTIMKKMVTLVQDNYAERLHQLFILYPNFLVKSIMTVVRPFLSEKTKSKI 215
BLAST of EWM27704.1 vs. NCBI_GenBank
Match: gi|145493659|ref|XP_001432825.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124399939|emb|CAK65428.1| unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 113.235 bits (282), Expect = 1.392e-25 Identity = 63/203 (31.03%), Postives = 110/203 (54.19%), Query Frame = 0
Query: 107 NHKAIFEELLAKITE----LAPEDNVPPYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKV 305
+H ++L KI E L E+ + Y++ED L R+L+AR ++ +AF W V WRK Y+ + EE + G DK G PC+ + H N ++ +R + ++++ ++ T G I+VI D+EGV KN D+++F +V ++Q+ Y ERL +IL+ +++ + + I+ PFL+EKT+ K+
Sbjct: 6 DHTERLKQLQIKIQEEIRNLVSENLIQKYSNEDHLVRLLIAREWKINDAFEQWKRWVEWRKQYRADEIKIEEIQKEIDLRKAFWNGVDKLGNPCLIIKAKRHFPGESNPETLIRFFLYMIDQGIQQADMTGTGRISVIWDREGVAFKNFDSSMFTIMKKIVTLVQDNYAERLHQLFILYPNFLVKSVMNIVRPFLNEKTKSKI 208
BLAST of EWM27704.1 vs. NCBI_GenBank
Match: gi|747054187|ref|XP_011073289.1| (random slug protein 5 [Sesamum indicum]) HSP 1 Score: 111.309 bits (277), Expect = 6.268e-25 Identity = 64/176 (36.36%), Postives = 93/176 (52.84%), Query Frame = 0
Query: 133 DEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQ-ILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADG--FIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKV 305
DE L R L AR+L V +A M++ +AWR+ + P+ +SE E + + + + G DKQGRP H D R +V L++ +R DG +I D EG G N D G + ILQEYYPERLG Y++H +IF +W I++PF+D+ TR+K+
Sbjct: 47 DELTLRRFLRARDLDVEKASAMFLKYLAWRRTFVPKGYISESEIRDEIEQKKMFMQGRDKQGRPIAVVFASRHFAAKGGVDEFRRFLVFALDRLC---SRIPDGQEKFTIIGDIEGFGYCNSDVR---GTIAAINILQEYYPERLGKLYVIHVPYIFMTLWKIVAPFIDKNTRKKI 216
BLAST of EWM27704.1 vs. NCBI_GenBank
Match: gi|729292749|ref|XP_010530779.1| (PREDICTED: random slug protein 5-like [Tarenaya hassleriana]) HSP 1 Score: 110.923 bits (276), Expect = 8.144e-25 Identity = 64/180 (35.56%), Postives = 97/180 (53.89%), Query Frame = 0
Query: 129 PPYNDED--LLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQ-ILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKV 305
P DED +L R L AR+ + +A M++ + W++ P+ +SE E + LS V + G DKQGRP + A H N + R ++ L+K R + FIA I D +G G N D ++ + ILQ+Y+PERLG YI+H+ +IF W ++ PF+D KT+RK+
Sbjct: 44 PSTKDEDDLMLRRFLRARDHDIEKASNMFLKYINWKRTSVPKGYISEPEISNDLSHNKVCMGGHDKQGRPVVVAFGSRHNPSKGNPEEFKRFVIYTLQKIVARMPRGEEKFIA-IGDVQGWGYSNCDIRGYLA---ALSILQDYHPERLGKLYIVHSPYIFMTAWKVVYPFIDSKTKRKI 219 The following BLAST results are available for this feature:
BLAST of EWM27704.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|