EWM27783.1, cds2890 (CDS) Nannochloropsis gaditana

Overview
NameEWM27783.1
Unique Namecds2890
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:203671..204375 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27783.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101199g1.955.mrna
GbkeyCDS
End range.
End range204375
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:203671..204375 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27783.1 vs. NCBI_GenBank
Match: gi|585110072|gb|EWM27783.1| (hypothetical protein Naga_101199g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 438.343 bits (1126), Expect = 5.711e-155
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0 
Query:    1 KEEGGGGGGGGGGGGGGGGGGERERGRRLGRCLSRGLPPLLLPSFPSPHCPQPQRPSVGPAGLPYRVECLLFLPRRAGPDRGLRDPTTAHALVSLPTSRPRGREGGLGGTGRHKRGRSGPAGAFLSRLHHRLGLDDGGEAPVGRSRERAVVYIDARGGVFAGAVEEEIGNDGILLKEGGREGGKHGGGTCQQVMKEGKKEEGMRAGGREGRREGRKARSRMWIMMRAKARGPML 234
            KEEGGGGGGGGGGGGGGGGGGERERGRRLGRCLSRGLPPLLLPSFPSPHCPQPQRPSVGPAGLPYRVECLLFLPRRAGPDRGLRDPTTAHALVSLPTSRPRGREGGLGGTGRHKRGRSGPAGAFLSRLHHRLGLDDGGEAPVGRSRERAVVYIDARGGVFAGAVEEEIGNDGILLKEGGREGGKHGGGTCQQVMKEGKKEEGMRAGGREGRREGRKARSRMWIMMRAKARGPML
Sbjct:    1 KEEGGGGGGGGGGGGGGGGGGERERGRRLGRCLSRGLPPLLLPSFPSPHCPQPQRPSVGPAGLPYRVECLLFLPRRAGPDRGLRDPTTAHALVSLPTSRPRGREGGLGGTGRHKRGRSGPAGAFLSRLHHRLGLDDGGEAPVGRSRERAVVYIDARGGVFAGAVEEEIGNDGILLKEGGREGGKHGGGTCQQVMKEGKKEEGMRAGGREGRREGRKARSRMWIMMRAKARGPML 234
The following BLAST results are available for this feature:
BLAST of EWM27783.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110072|gb|EWM27783.1|5.711e-155100.00hypothetical protein Naga_101199g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2898rna2898Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications