rna2898, rna2898 (mRNA) Nannochloropsis gaditana

Overview
Namerna2898
Unique Namerna2898
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1488
Alignment locationCM002460.1:203553..204375 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101199g1.955.mrna
Orig protein idgnl|cribi|Naga_101199g1.955
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:203553..204375 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101199g1gene2777Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27783.1cds2890Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2898rna2898-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2898 ID=rna2898|Name=rna2898|organism=Nannochloropsis gaditana|type=mRNA|length=1488bp
GCGGGAAAGTCGGAAAAGCAGCGAGAGACATATGGCAGCGGAGGAGACTT
CAAGGACACCAATAGCTTGCCCAAAATACAGGGCTACATCCGTAACGGCG
CTGAAAACGACATAAATTGACCGATCTATCCATGAAATACTGTGTATTTG
GTGTGAACGAAAGAAATTGCGGTGCACGCTGGGTTTAAATACAAGGAGGG
CAAGTTGAAGCCGGGGGGTTGCCATATGGTTGGATTCCCCCACGATGGTC
ATTATACAATGCCGTGTGAATCCGTCAAAATCGTGTGCTCAAAATGCATG
TACATACGTTCATTCTTTCCATGGAGCTCATCAAAGCTGCGCCTTGGCCA
TAGATTCTTTTGGATTTTTGTTTCCGATCGATGCTTTTTCCCCTCTACAC
TCGCTCGTTCGCCTTCATCGTCCTTCTCATACCCACATGCTTTTTCTCAC
CGCACCCGCTTTTATTATCGCAATGCAGATTGAGCATGCATAGCCGCATC
TTCACATCGGCCATTCGCCCTGCTTTTTTGCCCGCTGGCACCCTCTCTCT
GACGGGACCTGCAGCACGCATGGGCAGCGTAGTGCGACAACAAAGCAGCA
CACGGTCTCCAGTCCAGTACAGCTCGCGAAAGAATTTCAAGCAGACTTGG
CTGATGGATGGAGCAACATACCCCATCATTGTCATCATTACCTTCGCCGT
CACCATGTGCAGTGGCTTCACTGCATACAAGTTCCTCCACAGCCCGGACA
ACCGCGTGGACCCGCGCAAGCGCACCTCCTTGATGCGAGACTGGAAGTAG
GCCTAGGCGCCTAGCAGAAGGGAAGGATGCGAGACTGGAAGTAGGCCTAG
GCGCATAGCAGAAGGGAATTCGTGGAGGGAAGGAGAAGAGACATGGAGAA
GGTAGGAAAGAATGGGTGGATATAGAGGAGAAAATACATGGAGGGGGGCC
ATGACTCACGCTGTGGTCATGAGGCGACTGTCGCCGGCATTGGCGAAGTA
GTCGAGGTGGGGGGAGAAGAAATCGAAGGGGTCCTGGAATCGGAAAAATG
GCATGACGAGCCAGAAAGTGGACGCCTAAGGAAGACACTCTTAGGGTGTG
GGAGAGAGAAGAAGGTAGTGGCATCGGGGATGGGAGGGGAGGGGAACGAC
GGAGTGTATGATATGCCGCGATGGGAGACAGGCCCTGGAAATGGTGAGCC
AGGGATAAGCCGCGTTTTTACGGAAGCTGGGTCGTCCGCTATGAGAAGAG
ATACAAAGGATAAGCGGTAGGAAACAATAGGAATGAAACGACGTGTGCAG
ATGCGCCTTTGAGGGGGGCGTTTTGTGATGCCTGGGACAGCTTTCTTCCT
TTTCTTGTTTCAAGCTGAAGTATGCTTTGAAGGGAACGTGCAGCAGCACC
GTGTATACCACCTTCGTCCCTTAAATAATTTCACAAATCATTTACAGCAT
GGGGCCCCTGGCCTTCGCCCGCATCATTATCCACATCC
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protein sequence of rna2898

>rna2898-protein ID=rna2898-protein|Name=rna2898|organism=Nannochloropsis gaditana|type=polypeptide|length=234bp
KEEGGGGGGGGGGGGGGGGGGERERGRRLGRCLSRGLPPLLLPSFPSPHC
PQPQRPSVGPAGLPYRVECLLFLPRRAGPDRGLRDPTTAHALVSLPTSRP
RGREGGLGGTGRHKRGRSGPAGAFLSRLHHRLGLDDGGEAPVGRSRERAV
VYIDARGGVFAGAVEEEIGNDGILLKEGGREGGKHGGGTCQQVMKEGKKE
EGMRAGGREGRREGRKARSRMWIMMRAKARGPML
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mRNA from alignment at CM002460.1:203553..204375-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2898 ID=rna2898|Name=rna2898|organism=Nannochloropsis gaditana|type=mRNA|length=823bp|location=Sequence derived from alignment at CM002460.1:203553..204375- (Nannochloropsis gaditana)
AAGGAAGAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGAAAGGGAACGAGGTCGTCGACTGGGTAGGTGTCTCT
CCCGCGGGCTACCTCCTCTCCTACTCCCGTCCTTCCCATCTCCTCACTGC
CCACAGCCTCAACGGCCGTCTGTTGGCCCGGCTGGCCTGCCGTACCGGGT
TGAGTGCCTTTTGTTTCTCCCACGACGGGCAGGTCCTGATCGTGGGCTCC
GAGACCCGACGACTGCACATGCTCTGGTGTCACTCCCTACGTCCCGCCCG
AGGGGGAGGGAGGGAGGGCTTGGAGGGACTGGTCGCCACAAACGGGGCCG
GTCCGGGCCTGCGGGTGCCTTCCTTTCCCGCCTCCATCACCGCCTTGGCC
TTGACGACGGAGGAGAAGCACCTGTTGGTAGGTCTAGGGAACGGGCAGTT
GTATACATTGACGCCAGAGGCGGGGTATTTGCGGGCGCGGTTGAAGAAGA
AATTGGAAACGATGGGATTCTACTGAAGGAGGGAGGGAGGGAGGGAGGGA
AGCACGGAGGGGGGACGTGTCAACAAGTAATGAAAGAGGGAAAAAAAGAA
GAGGGAATGAGGGCAGGAGGAAGGGAAGGAAGAAGGGAGGGAAGGAAGGC
GAGGTCGAGGATGTGGATAATGATGCGGGCGAAGGCCAGGGGCCCCATGC
TGTAAATGATTTGTGAAATTATTTAAGGGACGAAGGTGGTATACACGGTG
CTGCTGCACGTTCCCTTCAAAGCATACTTCAGCTTGAAACAAGAAAAGGA
AGAAAGCTGTCCCAGGCATCACA
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Coding sequence (CDS) from alignment at CM002460.1:203553..204375-

>rna2898 ID=rna2898|Name=rna2898|organism=Nannochloropsis gaditana|type=CDS|length=705bp|location=Sequence derived from alignment at CM002460.1:203553..204375- (Nannochloropsis gaditana)
AAGGAAGAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGAAAGGGAACGAGGTCGTCGACTGGGTAGGTGTCTCT
CCCGCGGGCTACCTCCTCTCCTACTCCCGTCCTTCCCATCTCCTCACTGC
CCACAGCCTCAACGGCCGTCTGTTGGCCCGGCTGGCCTGCCGTACCGGGT
TGAGTGCCTTTTGTTTCTCCCACGACGGGCAGGTCCTGATCGTGGGCTCC
GAGACCCGACGACTGCACATGCTCTGGTGTCACTCCCTACGTCCCGCCCG
AGGGGGAGGGAGGGAGGGCTTGGAGGGACTGGTCGCCACAAACGGGGCCG
GTCCGGGCCTGCGGGTGCCTTCCTTTCCCGCCTCCATCACCGCCTTGGCC
TTGACGACGGAGGAGAAGCACCTGTTGGTAGGTCTAGGGAACGGGCAGTT
GTATACATTGACGCCAGAGGCGGGGTATTTGCGGGCGCGGTTGAAGAAGA
AATTGGAAACGATGGGATTCTACTGAAGGAGGGAGGGAGGGAGGGAGGGA
AGCACGGAGGGGGGACGTGTCAACAAGTAATGAAAGAGGGAAAAAAAGAA
GAGGGAATGAGGGCAGGAGGAAGGGAAGGAAGAAGGGAGGGAAGGAAGGC
GAGGTCGAGGATGTGGATAATGATGCGGGCGAAGGCCAGGGGCCCCATGC
TGTAA
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Synonyms
Publications