EWM27792.1, cds2878 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27792.1 vs. NCBI_GenBank
Match: gi|585110088|gb|EWM27792.1| (hypothetical protein Naga_100324g5 [Nannochloropsis gaditana]) HSP 1 Score: 498.434 bits (1282), Expect = 2.673e-178 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0 Query: 1 MPRSLFSSLLLSALLIGHIHAFLLPAITRNMGQSIVFCASLASVDVSSPPSMSSTSSSPASIPSEAEWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWRYDFDIMRAARPKWLVTYAERKFDSDAHTAKWTALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPLGPTVTVTADEPLESETAVWLWDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDFLAEMRR 247 MPRSLFSSLLLSALLIGHIHAFLLPAITRNMGQSIVFCASLASVDVSSPPSMSSTSSSPASIPSEAEWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWRYDFDIMRAARPKWLVTYAERKFDSDAHTAKWTALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPLGPTVTVTADEPLESETAVWLWDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDFLAEMRR Sbjct: 1 MPRSLFSSLLLSALLIGHIHAFLLPAITRNMGQSIVFCASLASVDVSSPPSMSSTSSSPASIPSEAEWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWRYDFDIMRAARPKWLVTYAERKFDSDAHTAKWTALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPLGPTVTVTADEPLESETAVWLWDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDFLAEMRR 247
BLAST of EWM27792.1 vs. NCBI_GenBank
Match: gi|551675832|ref|XP_005840670.1| (hypothetical protein GUITHDRAFT_100666 [Guillardia theta CCMP2712] >gi|428184836|gb|EKX53690.1| hypothetical protein GUITHDRAFT_100666 [Guillardia theta CCMP2712]) HSP 1 Score: 136.732 bits (343), Expect = 1.502e-36 Identity = 81/190 (42.63%), Postives = 104/190 (54.74%), Query Frame = 0 Query: 57 SSPASIPSEAEWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWRYDFDIMRAARPKWLVTYAERKF-DSDAHTAKWTALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPLGPTVTVTADE-PLESETAVWLWDKLLPPGSKSAVLTARLMERRLREWAN-GKDSLMWGDFLA 243 SS E E KIFGRLA+K IF D SAG CCHSGCD+CEWRY FDIM+AARPKW+ Y+E +F D H AKW+ LF+ DE+ +T L ERL + F PLGP+ +TA + L+ E W K+ K +T + M RLR+ A G++ +MW DF+A Sbjct: 2 SSSTGQVEEVELVKIFGRLAEKMIFGDGSAGACCHSGCDDCEWRYSFDIMQAARPKWIPCYSENRFEDGREHIAKWSKLFN-------------DENTITRDT-----------LYERLREMKFEMPLGPSGYMTASQAELKDEALDLFWAKISANKDK---VTPKQMSIRLRKMATPGEEGVMWSDFVA 164
BLAST of EWM27792.1 vs. NCBI_GenBank
Match: gi|1210519666|dbj|GAX21435.1| (hypothetical protein FisN_10Hh013 [Fistulifera solaris]) HSP 1 Score: 99.7525 bits (247), Expect = 4.193e-22 Identity = 73/239 (30.54%), Postives = 112/239 (46.86%), Query Frame = 0 Query: 9 LLLSALLIGHIHAFLLPAITRNMGQSIVFCASLASVDVSSPPSMSSTSSSPASIPSEAEWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDAHTAKW-TALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPLGPTVTVTADEPLESETAVWLWDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDF 241 LL++A LIG AF P + + G S +SS ++ ++ A P EA KIFGRLA+K I +D SAG CC+S C +CE+R Y AARPKW+ +Y R+ + H+ KW T +F T GP S E++ + ++ PLG + +++ A+ + ++L G + LT M +RL+E A+G++ L W F Sbjct: 7 LLMAAALIGDGDAFT-PILKQGYG----------SRKMSSTLLAETSQAAAAVSPKEA--VKIFGRLAEKYIMLDSSAGMCCYSACADCEFRLPGGGYRMADQSAARPKWIPSYETRQANGKEHSTKWSTKIF----------------------TEGPA--VSMEEFVEKIQQIEYVPPLGGPYVGASSAAFDNDQALQSFFEILSNGKEK--LTRHRMSQRLKELADGEEGLTWAAF 206
BLAST of EWM27792.1 vs. NCBI_GenBank
Match: gi|219121388|ref|XP_002185919.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582768|gb|ACI65389.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 99.3673 bits (246), Expect = 5.399e-22 Identity = 73/224 (32.59%), Postives = 103/224 (45.98%), Query Frame = 0 Query: 35 IVFCASLASVDVSSPPSMSSTSSSPASIP-----------SEAEWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDAHTAKWTALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPL-GPTVTVTADEPLESETAVWLWDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDF 241 +VFC L + S PS++ S+ S+ + E K+FGRLA+K I +D+SAG CC+S C +CE+R Y AARPKW+ +Y ER + HT KW+ E +F GP V +L AL + PL GP V +A ++ T L+D L+ G LT M RL+E A+G++ L W F Sbjct: 5 LVFC--LFAGATSFYPSLTHIQSNRISVHLFSAETSDVAIDQKEAVKVFGRLAEKYIMLDDSAGMCCYSACADCEYRLPGGGYRMADQSAARPKWIPSYTERAANDRQHTTKWS------------------EQLF---VDGPALTKEEFV--TKLKALEYAPPLGGPYVGASAAALDDTSTVAHLFDILVAEGKDK--LTKHRMSVRLKELADGEEGLTWAGF 201
BLAST of EWM27792.1 vs. NCBI_GenBank
Match: gi|1210523843|dbj|GAX17167.1| (hypothetical protein FisN_10Lh013 [Fistulifera solaris]) HSP 1 Score: 93.5893 bits (231), Expect = 6.986e-20 Identity = 65/206 (31.55%), Postives = 100/206 (48.54%), Query Frame = 0 Query: 42 ASVDVSSPPSMSSTSSSPASI-PSEAEWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDAHTAKWTALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPLGPTVTVTADEPLESETAVWLWDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDF 241 S V+S ++ T+ + A++ P EA KIFGRLA+K I +D SAG CC+S C +CE+R Y AARPKW+ +Y R+ + H+ KW ST + E GP S E++ L ++ PLG + + + A+ + ++L G + LT M +RL+E A+G++ L W F Sbjct: 9 GSQKVASALLLADTNQAAAAVSPKEA--VKIFGRLAEKYIMLDSSAGMCCYSACTDCEFRLPGGGYRMADQSAARPKWIPSYETRQANGKEHSTKW-------------STEIFAE--------GPA--VSMEEFVEKVQQLEYVPPLGGPYVGASSAAFDDDQALQSFFEILSNGKEK--LTRHRMGQRLKELADGEEGLTWAAF 187
BLAST of EWM27792.1 vs. NCBI_GenBank
Match: gi|397648135|gb|EJK78004.1| (hypothetical protein THAOC_00121 [Thalassiosira oceanica]) HSP 1 Score: 92.8189 bits (229), Expect = 3.370e-19 Identity = 64/194 (32.99%), Postives = 96/194 (49.48%), Query Frame = 0 Query: 57 SSPASIPSE-AEWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDA--HTAKWTALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPL-GPTVTVTADEPLESETAVWLWDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDF 241 ++PA+I ++ E K+FGRLA+K I +D SAG CC+S C +CE+R Y AARPKW+ Y +R F++ HT KW+ S + PV ++ F +RL +L F PL GP + +A + +A L+D L K LT M + +++ ANG++ L W F Sbjct: 66 ATPAAIETDPKEAVKLFGRLAEKYIMLDASAGMCCYSACTDCEYREPGGGYRMADQSAARPKWIPCYEDRNFEAQGKQHTTKWS-------SEIFTDGPVVTKEQF----------------VDRLISLEFKPPLGGPYLAASAAAIEDESSAAALFDVLAGEKEK---LTRFRMGKAMKDLANGEEGLTWAMF 233
BLAST of EWM27792.1 vs. NCBI_GenBank
Match: gi|223993891|ref|XP_002286629.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977944|gb|EED96270.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 89.7373 bits (221), Expect = 3.370e-18 Identity = 63/188 (33.51%), Postives = 92/188 (48.94%), Query Frame = 0 Query: 67 EWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDA-HTAKW-TALF-DPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPLGPTVTVTADEPLESETAVW-LWDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDFLAEM 245 E K+FGRLA+K I +D SAG CC+SGC +CE+R Y ++RPKW+ +Y R+F+S HT KW T +F D PA V+ E+ + R+ + F PLG + +E E+A L+D L K LT M + ++ ANG++ L W +F A + Sbjct: 59 EAVKLFGRLAEKYIMLDASAGMCCYSGCTDCEFREPGGGYRMADQSSSRPKWIPSYDHREFNSGKEHTTKWSTEIFVDGPA--------VTKEEFVS-----------------RVINMQFAPPLGGPYLAASAATIEDESAAASLFDILAGEKEK---LTKHRMGKEMKSLANGEEGLTWANFSAAL 218
BLAST of EWM27792.1 vs. NCBI_GenBank
Match: gi|922858818|gb|KOO26906.1| (hypothetical protein Ctob_004425 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 88.1965 bits (217), Expect = 1.477e-17 Identity = 64/196 (32.65%), Postives = 94/196 (47.96%), Query Frame = 0 Query: 64 SEAEWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDAHTAKWTALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPLGPTVTVT-ADEPLESETAVWLWDKLLPPGSKSAVLTARLMERRLREW------------ANGKDSLMWGDF 241 S + AKIFGRLA+K +++D + G CCHS C +CEWR Y +D+M+A KWL Y R F + LF P ++ VS D F+T RLSA+P+ +GP TV A+ P ++ A+W + L ++ A L+A M +RL+ G DS++W +F Sbjct: 42 STVDAAKIFGRLAEKTLYLDATVGACCHSACSDCEWRTPGGGYRWDVMKAQVAKWLPCYLTRDFADE-------PLF------PGAAATVSRAD-FDT----------------RLSAMPYSGAMGPKGTVKEAELPAQALDAIWAF--LCDGDAQCAELSASAMLQRLQSMSLLEGIERAGAIGQGPDSIVWNEF 205
BLAST of EWM27792.1 vs. NCBI_GenBank
Match: gi|1072232880|gb|OEU17611.1| (hypothetical protein FRACYDRAFT_184733 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 82.4185 bits (202), Expect = 2.245e-15 Identity = 60/185 (32.43%), Postives = 86/185 (46.49%), Query Frame = 0 Query: 69 AKIFGRLADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSDA--HTAKWTALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPL-GPTVTVTADEPLESETAVWLWDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDFLAEM 245 K+FGRLA+K I +DES G CC+S C +CE+R Y A+RPKW+ Y ER F + HTAKW + + D +F T+ E + L F PL GP V+ +A + A +L+D +L G + LT M L + + G+ L W +F A + Sbjct: 59 VKLFGRLAEKYIMLDESGGMCCYSACKDCEFRLPGGGYRMADQSASRPKWIPVYEERVFANQGKEHTAKW-------------RSSIFDGKLFVTKDE----------FVESILELDFATPLGGPFVSKSAGTLEDPTGAEYLFD-ILAEGKEK--LTRHKMHLSLTKLSEGEAGLTWPNFSAAL 217
BLAST of EWM27792.1 vs. NCBI_GenBank
Match: gi|551598070|ref|XP_005781105.1| (hypothetical protein EMIHUDRAFT_234836 [Emiliania huxleyi CCMP1516] >gi|485633816|gb|EOD28676.1| hypothetical protein EMIHUDRAFT_234836 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 69.707 bits (169), Expect = 1.798e-10 Identity = 49/187 (26.20%), Postives = 74/187 (39.57%), Query Frame = 0 Query: 75 LADKAIFMDESAGQCCHSGCDNCEWR-----YDFDIMRAARPKWLVTYAERKFDSD--AHTAKWTALFDPPASSPTSSTPVSDEDMFNTETAGPTSLASPTVLAERLSALPFLAPLGPTVTVTADEPLESETAVWL-------WDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDFLAEMRR 247 LA+ + +D G CCHS C +CEWR Y FD+++A +PKW+ Y R F + H +W + P T + E L+ L F P+GP +V AD + A L D L P G+++ + + G D L+W +F + R Sbjct: 16 LAEPLVHLDPEVGACCHSACSDCEWRLPDGGYRFDVLKATKPKWVPCYLRRDFGDERGCHEPRWASALFPGGGEVTRAQ-----------------------FGEALAGLGFEMPMGPRGSVGADGGVPESAADALWAWLAGDGDALTPEGARTRLQAMAEDPQAEGAVGEGPDHLVWKEFAKDAAR 179 The following BLAST results are available for this feature:
BLAST of EWM27792.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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