rna2886, rna2886 (mRNA) Nannochloropsis gaditana

Overview
Namerna2886
Unique Namerna2886
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length867
Alignment locationCM002460.1:170960..171803 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100324g5.673.mrna
Orig protein idgnl|cribi|Naga_100324g5.673
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:170960..171803 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100324g5gene2764Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27792.1cds2878Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2886rna2886-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2886 ID=rna2886|Name=rna2886|organism=Nannochloropsis gaditana|type=mRNA|length=867bp
ATGACGGTGGCAGAAGCGGTAGCGGCAGCGAGTGACGCCGGTGCTTGGCG
CGGGAATTTCTCCTTGCGGGAGGAGACAAGGAGAGGGGATCAGGGAGGTG
GAGAGGGAGGGAAGGAGGGCGGGAAGGAGGGAGGGAAGGAGGGAGGGAAG
GAGGGCGGGAAGGAGGGAGGGAAGGAGGGCGGGGAGGAGGGAGGGAGGGC
GGCACGCATGCTGCGGGCGTGTAGGGGAGGCCGCCCACAGGCATGGCCAG
TGTCCGACCCCGTCATCGGCATTAGCGATAAGGAAAATAGCAGGGCCGCT
TTCACGCCACATACGGGGCGCTACCGCCCTTACCCTCCCCCGACTGGCGG
CGAGGAGCAACTTCCCACAGCCAGTCCCAATGGCAGGACAGGACGGCGCG
AGCACGACGGTTCCACGGCTGCCAGCAGGATGGCCACCGACTCCCCCCGA
GGGCATCCTCACGGTCAGTGCCGTATGCCTTTGGATCCCAAGTCTCCTTG
TCCCGCGTCCGGCGGCGTCATACACCTTCCTGGGGTCGGGCGGGCTCGCC
AAGAGAAATCGGGGGCGCTCTCCGTCTGCTTCGACGTGGATGGGAGCGTG
GTCCGGGTGGATGCCAGCGGGTCGTGCGTCTATTACCGAGAAAGCCCGAG
GGTAGCCGAGCAGTCCTATCCCCTGGGTGTCTCCACATCCGAGCAGGGAG
GCGCTTGGAAGGGCGGGCTAAGTGGCACGGCGCTGCCTAAGGAGCTACGA
AGGAAACTGAAGATTGTGTGGAAGCATTTTTTGACGTAGCGGACGGTATG
TCGAAAGACAAAGTGCAAAAAAGAGAAATCAAGCGGGCATTGAAGAACAA
ACAAAAAATACATGAGG
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protein sequence of rna2886

>rna2886-protein ID=rna2886-protein|Name=rna2886|organism=Nannochloropsis gaditana|type=polypeptide|length=247bp
MPRSLFSSLLLSALLIGHIHAFLLPAITRNMGQSIVFCASLASVDVSSPP
SMSSTSSSPASIPSEAEWAKIFGRLADKAIFMDESAGQCCHSGCDNCEWR
YDFDIMRAARPKWLVTYAERKFDSDAHTAKWTALFDPPASSPTSSTPVSD
EDMFNTETAGPTSLASPTVLAERLSALPFLAPLGPTVTVTADEPLESETA
VWLWDKLLPPGSKSAVLTARLMERRLREWANGKDSLMWGDFLAEMRR
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mRNA from alignment at CM002460.1:170960..171803-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2886 ID=rna2886|Name=rna2886|organism=Nannochloropsis gaditana|type=mRNA|length=844bp|location=Sequence derived from alignment at CM002460.1:170960..171803- (Nannochloropsis gaditana)
TTACGTAGGGATAGCCCAGCGCGCCCGGACTTGGCCACGCATTCCTTTTT
TCCATCTCCCCTGCTGCATCGTCAACCATGCCACGATCTCTCTTCTCCTC
CTTGCTCCTCTCCGCGCTCCTCATTGGCCACATCCACGCTTTCCTCCTGC
CCGCTATCACACGCAATATGGGGCAATCGATAGTATTCTGCGCATCTTTG
GCTTCCGTTGACGTGTCTTCCCCTCCGTCCATGTCCTCCACCTCCTCGTC
CCCTGCCAGCATTCCTTCCGAGGCCGAATGGGCCAAAATTTTCGGCCGCT
TGGCCGACAAGGCTATTTTTATGGACGAAAGTGCCGGACAATGCTGCCAT
TCCGGGTGTGACAATTGCGAGTGGCGGTACGATTTCGACATCATGCGGGC
GGCCCGGCCTAAGTGGTTGGTAACCTATGCCGAACGAAAATTCGATTCGG
ACGCGCACACGGCGAAATGGACAGCTCTTTTTGACCCTCCCGCCTCCTCG
CCCACCTCCTCCACCCCCGTGTCGGACGAAGACATGTTCAACACGGAAAC
CGCCGGTCCTACCTCCCTGGCCTCCCCGACCGTGCTGGCAGAGAGGTTGT
CTGCGCTCCCGTTCCTCGCCCCCCTCGGTCCGACCGTGACCGTTACGGCC
GACGAACCGTTGGAATCCGAAACTGCCGTGTGGTTGTGGGACAAGCTGCT
GCCTCCAGGGAGCAAGAGTGCAGTGTTGACGGCAAGGCTGATGGAGAGGC
GGTTGAGGGAATGGGCGAACGGGAAGGACTCTTTGATGTGGGGGGACTTC
CTGGCCGAAATGAGGAGATGAGGGGGCAAGATTTTTGTTAAAGA
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Coding sequence (CDS) from alignment at CM002460.1:170960..171803-

>rna2886 ID=rna2886|Name=rna2886|organism=Nannochloropsis gaditana|type=CDS|length=744bp|location=Sequence derived from alignment at CM002460.1:170960..171803- (Nannochloropsis gaditana)
ATGCCACGATCTCTCTTCTCCTCCTTGCTCCTCTCCGCGCTCCTCATTGG
CCACATCCACGCTTTCCTCCTGCCCGCTATCACACGCAATATGGGGCAAT
CGATAGTATTCTGCGCATCTTTGGCTTCCGTTGACGTGTCTTCCCCTCCG
TCCATGTCCTCCACCTCCTCGTCCCCTGCCAGCATTCCTTCCGAGGCCGA
ATGGGCCAAAATTTTCGGCCGCTTGGCCGACAAGGCTATTTTTATGGACG
AAAGTGCCGGACAATGCTGCCATTCCGGGTGTGACAATTGCGAGTGGCGG
TACGATTTCGACATCATGCGGGCGGCCCGGCCTAAGTGGTTGGTAACCTA
TGCCGAACGAAAATTCGATTCGGACGCGCACACGGCGAAATGGACAGCTC
TTTTTGACCCTCCCGCCTCCTCGCCCACCTCCTCCACCCCCGTGTCGGAC
GAAGACATGTTCAACACGGAAACCGCCGGTCCTACCTCCCTGGCCTCCCC
GACCGTGCTGGCAGAGAGGTTGTCTGCGCTCCCGTTCCTCGCCCCCCTCG
GTCCGACCGTGACCGTTACGGCCGACGAACCGTTGGAATCCGAAACTGCC
GTGTGGTTGTGGGACAAGCTGCTGCCTCCAGGGAGCAAGAGTGCAGTGTT
GACGGCAAGGCTGATGGAGAGGCGGTTGAGGGAATGGGCGAACGGGAAGG
ACTCTTTGATGTGGGGGGACTTCCTGGCCGAAATGAGGAGATGA
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Synonyms
Publications