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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100318g2.3140.mrna |
Orig protein id | gnl|cribi|Naga_100318g2.3140 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002460.1 | supercontig | CM002460.1:9317..12474 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2836 ID=rna2836|Name=rna2836|organism=Nannochloropsis gaditana|type=mRNA|length=243bp ATGGAAGACACATCAGTGACAGAGCTGGCTGGTGAGCCTAAATGCTTGGC CTGTCGGGAGTGCGAGATCAGCTACGAGTGCATGCCGTGCATGCACGCGG CTCTCTGTAAGAAGTGTGCCATGAAACAAGCTACAGGAGGGCTATGCAAG CAATGTAAGCGACCCTTCTCGGAGTTGCGTAGACGACGAAGAAGTGTTGA GGAGCGAGAAGGTCAACAAGATCGTGGTCATGAAGGCCGATAA back to topprotein sequence of rna2836 >rna2836-protein ID=rna2836-protein|Name=rna2836|organism=Nannochloropsis gaditana|type=polypeptide|length=798bp MDDNDREPLAKTSRGSLPSPSSSVDALSPAHSDDGGQDEYLVEGHRLTQV NDENDDASTRVTDDWALEAAAQELEARLANLRRYSNWRLNTRQYPSSPAL ETQHALWALRQTASGGLSLVLPPAIAEEEESEHEGPSMVRGQSLSAAIDE INGFMSRRATSAWRRSRTLASGGNLPYPTSSSRLSGPLLPLSQRQPGGAE GRVTLAPGIGSSTGSGRSPEARGGRDGKGTKVVEGERVTASATQEEEQRL PRDSPSLLRASLLSKAPPLWSAWERLGWTIGDYFMSLVVFVTISITWWRG AWNLLDYYVFPTHRALRALVLTLAGMTFNVLGFLCYPSLLRWSRRITCRR ESYVFGTVKRLVLLLRMLASVAHWTGVWDAVDGAFCGEEATSDCSFDYSS LGTITCIGLAGLVALRQMNGAVWGPLFSVSLDFQDELVLDTSLRFHTSQW RTGGQGEGPGGRLGGRGALLWHLLDILATQWLPDVFAILAWYGLYTWLPL RWPGTSRREELLYVAAAMGVAVGCYAAQFVLASWVDAYYPRASSSGSSSN GAGGEAVLEREGELGGSLGNGRRSIASRGNHNRSTQGDLSIPLQVPVPKC CEPPPFLSGKYLAELLLYLWAFLAANMLWVFWWDFLDDHLLSDRPLLSNL LCAVGGLALEFMLNVASTEVAGGVYLDGAAEGSSGLFFPVCYFGEVAAYR ASLRSAQAFAVYRKSTMGGLAGSASCSLLDTGVRSALESPVREIALLRPG SLGQGGEARGWKAGVAADKIGKVAETPTLVHGESGMGLLANESGRSDD back to topmRNA from alignment at CM002460.1:9317..12474+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2836 ID=rna2836|Name=rna2836|organism=Nannochloropsis gaditana|type=mRNA|length=3158bp|location=Sequence derived from alignment at CM002460.1:9317..12474+ (Nannochloropsis gaditana) GCCGCATAAATGTCACCAGGGACGTGAAGTCAAGCATATAACTCACGAAC
CATTTCTATATACTTTCGAAGGGTAGAAGGTCATCACGCATAGTACGGAC
TGGCCTCGAGTACTGGACACCTCGATCGGAGGGCTTCGTCGACAGAGGCG
CTCATTTTGCTTTTCCCCtacccctttttcctcgcgtCGCCCCTGAAGTA
GTTGAGGCGTGGCGTCAACACCGTGTGCAGCAAATGACTCGTCCTCAAGT
ACCTGTTTGACTTTTAGTGTGATGGATGATAATGACCGCGAGCCTCTAGC
CAAGACCTCTCGCGGCTCCCtgccttcaccttcctccagcgtcgacgccc
tctctcctgctcACAGTGATGACGGAGGCCAGGACGAGTATCTTGTTGAG
GGGCATCGATTAACTCAAGTCAACGATGAGAACGATGATGCCTCTACCCG
CGTCACCGATGATTGGGCTTTGGAAGCTGCGGCGCAAGAATTGGAAGCGA
GGCTTGCAAACCTACGCCGATACAGCAACTGGCGGCTGAATACTCGCCAA
TAcccgtcttcccctgccctAGAGACACAACATGCTTTGTGGGCTCTCCG
ACAGACAGCATCAGGAGGGCTCAGCCTTGTACTGCCTCCTGCTATtgccg
aagaagaggagagcgagcATGAGGGCCCGAGTATGGTCCGCGGGCAGTCA
CTGTCGGCCGCCATTGACGAAATTAACGGCTTCATGTCACGGAGAGCCAC
AAGCGCCTGGAGACGCTCTCGCACCCTTGCTTCGGGGGGAAATCTGCCAt
accccacctcctcgtctcgtCTTTCGGGTCCCCTTTTGCCCCTCTCGCAG
AGGCAgcccgggggggcggagggtcgTGTCACTTTGGCGCCTGGCATTGG
CAGCAGCACCGGCTCAGGGAGAAGCCCCGAAgcccgaggagggcgcgaTG
GCAAGGGAACGAAAGttgtggaaggagagcgcgTGACGGCCTCAGCTAct
caggaagaggaacagcGTTTGCCACGTGACAGCCCCAGTCTGCTTCGAGC
CTCGCTCTTGAGTAAGGCCCCACCGCTGTGGTCAGCATGGGAGCGTCTGG
GGTGGACGATAGGCGACTACTTCATGTCGTTGGTGGTCTTTGTTACCATT
TCCATCACTTGGTGGCGGGGCGCCTGGAACCTCCTCGACTACTACGTCTT
CCCTACCCACCGGGCCCTCCGCGCTCTTGTGCTGACCCTCGCGGGCATGA
CTTTTAACGTCCTGGGCTTTCTCTGctacccctccctgctgcgGTGGTCG
CGTCGGATTACCTGCCGTCGAGAAAGCTACGTGTTCGGGACGGTCAAGCG
CCTGGTGTTGCTGCTGCGCATGCTTGCCTCGGTGGCGCACTGGACAGGGG
TCTGGGACGCCGTGGACGGGGCTTTCtgtggagaggaggcgaccagCGAC
TGCAGGTATGGAAGAGGTCGAGTTAAGCGTGGGAGTAGGAAGGAAACTGC
CGGGAGCTaaggatggagaaagggaggaggaccacaAAGTTCCTTTTCCG
GCGCCTACACATGCGGGGCGTGTAAGCGCTCATGGCGATAGGCCGCCGTT
TTGGTGGCCGGCTTTCCTTGCAAGGATCATGGCTACAAATCTGTCAGCAT
TGTCTTCTTGAGAGCGGCACGCCCACGCCTCTTTTAATGGCTCTTTTTCC
taccgctttccctccctcccctcccagcttCGACTACAGCAGCTTGGGCA
CCATCACGTGCATAGGATTGGCCGGCCTGGTTGCATTGCGGCAGATGAAC
GGGGCGGTCTGGGGCCCACTCTTCTCGGTGTCTTTAGACTTCCAAGACGA
GCTTGTCCTGGatacctccctccgcttccacACGAGCCAGTGGCGAActg
gcggccagggagaggggccaggaggaaggttgggcgggaggggggcactG
CTCTGGCATCTGCTGGATATCCTGGCGACCCAGTGGCTGCCGGACGTATT
TGCCATTTTGGCTTGGTACGGGCTTTATACCTGGCTGCCGCTGCGGTGGC
CGGGaacgtcgaggagggaggaactcTTGTACGTGGCGGCCGCGATGGGG
GTGGCTGTCGGGTGTTACGCCGCCCAGTTCGTGCTGGCAAGCTGGGTAGA
TGCCTACTATCCTCGCGCGAgtagcagcggcagcagcagcaatggggccg
ggggggaagcggttttggagagagagggcgagcTGGGAGGAAGCCTGGGG
AACGGCAGGCGCAGCATAGCGAGTAGAGGCAACCACAACCGGAGCACTCA
AGGCGACTTGTCCATTCCACTGCAGGTGCCGGTTCCCAAATGCTGCGAAC
CACCCCCCTTTCTGTCGGGAAAGTACTTGGCGGAGCTCTTACTCTACCTG
TGGGCTTTCTTAGCCGCTAACATGCTCTGGGTCTTTTGGTGGGATTTCCT
CGACGACCACCTCTTGTCCGACCGGCCGCTGCTCAGCAACTTGCTCTGCG
CCGTGGGTGGGCTCGCGCTGGAGTTCATGTTGAATGTGGCATCgacggag
gtggcggggggcgtCTATCTGGACGgggcagcggaggggagCTCTGGCTT
GTTCTTCCCTGTGTGTTACTTCGGAGAGGTGGCCGCCTACCGGGCCAGCC
TCCGGTCTGCTCAGGCCTTCGCCGTGTATCGAAAGTCGACCATGGGAGGG
TTAGCGGGAAGCGCTTCTTGCTCCTTGCTAGACACCGGGGTCAGGAGCGC
TCTGGAAAGTCCTGTGCGGGAGATTGCCTTGCTGCGCCCCGGGTCTttgg
ggcaagggggagaggctAGGGGGTGGAAGGCCGGAGTGGCGGCGGACAAG
ATTGGAAAAGTGGCGGAAACGCCCACACTCGTCCATGGGGAGTCGGGCAT
GGGCTTGCTCGCGAATGAATCGGGGCGGTCGGACGActagggagagaggg
aaaggggaggcagagattTGTGGACGGAtcgcaggaggaagaacgagGCG
GGCGAGCCGGCCATCATTTGTTGCGGGAGAGGTGTGAATTTGAAAAATGT
GAAAAGCAGACCAGCGATGTACAGCACACGTTTCGTAGGTTCAAAGTAAA
GATACATGCCCTCAAGGGATGGAAGATGAAATGGAGCTTTCGCCAGAGGT
TGACGTCC back to topCoding sequence (CDS) from alignment at CM002460.1:9317..12474+ >rna2836 ID=rna2836|Name=rna2836|organism=Nannochloropsis gaditana|type=CDS|length=4794bp|location=Sequence derived from alignment at CM002460.1:9317..12474+ (Nannochloropsis gaditana) ATGGATGATAATGACCGCGAGCCTCTAGCCAAGACCTCTCGCGGCTCCCt gccttcaccttcctccagcgtcgacgccctctctcctgctcACAGTGATG ACGGAGGCCAGGACGAGTATCTTGTTGAGGGGCATCGATTAACTCAAGTC AACGATGAGAACGATGATGCCTCTACCCGCGTCACCGATGATTGGGCTTT GGAAGCTGCGGCGCAAGAATTGGAAGCGAGGCTTGCAAACCTACGCCGAT ACAGCAACTGGCGGCTGAATACTCGCCAATAcccgtcttcccctgccctA GAGACACAACATGCTTTGTGGGCTCTCCGACAGACAGCATCAGGAGGGCT CAGCCTTGTACTGCCTCCTGCTATtgccgaagaagaggagagcgagcATG AGGGCCCGAGTATGGTCCGCGGGCAGTCACTGTCGGCCGCCATTGACGAA ATTAACGGCTTCATGTCACGGAGAGCCACAAGCGCCTGGAGACGCTCTCG CACCCTTGCTTCGGGGGGAAATCTGCCAtaccccacctcctcgtctcgtC TTTCGGGTCCCCTTTTGCCCCTCTCGCAGAGGCAgcccgggggggcggag ggtcgTGTCACTTTGGCGCCTGGCATTGGCAGCAGCACCGGCTCAGGGAG AAGCCCCGAAgcccgaggagggcgcgaTGGCAAGGGAACGAAAGttgtgg aaggagagcgcgTGACGGCCTCAGCTActcaggaagaggaacagcGTTTG CCACGTGACAGCCCCAGTCTGCTTCGAGCCTCGCTCTTGAGTAAGGCCCC ACCGCTGTGGTCAGCATGGGAGCGTCTGGGGTGGACGATAGGCGACTACT TCATGTCGTTGGTGGTCTTTGTTACCATTTCCATCACTTGGTGGCGGGGC GCCTGGAACCTCCTCGACTACTACGTCTTCCCTACCCACCGGGCCCTCCG CGCTCTTGTGCTGACCCTCGCGGGCATGACTTTTAACGTCCTGGGCTTTC TCTGctacccctccctgctgcgGTGGTCGCGTCGGATTACCTGCCGTCGA GAAAGCTACGTGTTCGGGACGGTCAAGCGCCTGGTGTTGCTGCTGCGCAT GCTTGCCTCGGTGGCGCACTGGACAGGGGTCTGGGACGCCGTGGACGGGG CTTTCtgtggagaggaggcgaccagCGACTGCAGcttCGACTACAGCAGC TTGGGCACCATCACGTGCATAGGATTGGCCGGCCTGGTTGCATTGCGGCA GATGAACGGGGCGGTCTGGGGCCCACTCTTCTCGGTGTCTTTAGACTTCC AAGACGAGCTTGTCCTGGatacctccctccgcttccacACGAGCCAGTGG CGAActggcggccagggagaggggccaggaggaaggttgggcgggagggg ggcactGCTCTGGCATCTGCTGGATATCCTGGCGACCCAGTGGCTGCCGG ACGTATTTGCCATTTTGGCTTGGTACGGGCTTTATACCTGGCTGCCGCTG CGGTGGCCGGGaacgtcgaggagggaggaactcTTGTACGTGGCGGCCGC GATGGGGGTGGCTGTCGGGTGTTACGCCGCCCAGTTCGTGCTGGCAAGCT GGGTAGATGCCTACTATCCTCGCGCGAgtagcagcggcagcagcagcaat ggggccgggggggaagcggttttggagagagagggcgagcTGGGAGGAAG CCTGGGGAACGGCAGGCGCAGCATAGCGAGTAGAGGCAACCACAACCGGA GCACTCAAGGCGACTTGTCCATTCCACTGCAGGTGCCGGTTCCCAAATGC TGCGAACCACCCCCCTTTCTGTCGGGAAAGTACTTGGCGGAGCTCTTACT CTACCTGTGGGCTTTCTTAGCCGCTAACATGCTCTGGGTCTTTTGGTGGG ATTTCCTCGACGACCACCTCTTGTCCGACCGGCCGCTGCTCAGCAACTTG CTCTGCGCCGTGGGTGGGCTCGCGCTGGAGTTCATGTTGAATGTGGCATC gacggaggtggcggggggcgtCTATCTGGACGgggcagcggaggggagCT CTGGCTTGTTCTTCCCTGTGTGTTACTTCGGAGAGGTGGCCGCCTACCGG GCCAGCCTCCGGTCTGCTCAGGCCTTCGCCGTGTATCGAAAGTCGACCAT GGGAGGGTTAGCGGGAAGCGCTTCTTGCTCCTTGCTAGACACCGGGGTCA GGAGCGCTCTGGAAAGTCCTGTGCGGGAGATTGCCTTGCTGCGCCCCGGG TCTttggggcaagggggagaggctAGGGGGTGGAAGGCCGGAGTGGCGGC GGACAAGATTGGAAAAGTGGCGGAAACGCCCACACTCGTCCATGGGGAGT CGGGCATGGGCTTGCTCGCGAATGAATCGGGGCGGTCGGACGActagATG GATGATAATGACCGCGAGCCTCTAGCCAAGACCTCTCGCGGCTCCCtgcc ttcaccttcctccagcgtcgacgccctctctcctgctcACAGTGATGACG GAGGCCAGGACGAGTATCTTGTTGAGGGGCATCGATTAACTCAAGTCAAC GATGAGAACGATGATGCCTCTACCCGCGTCACCGATGATTGGGCTTTGGA AGCTGCGGCGCAAGAATTGGAAGCGAGGCTTGCAAACCTACGCCGATACA GCAACTGGCGGCTGAATACTCGCCAATAcccgtcttcccctgccctAGAG ACACAACATGCTTTGTGGGCTCTCCGACAGACAGCATCAGGAGGGCTCAG CCTTGTACTGCCTCCTGCTATtgccgaagaagaggagagcgagcATGAGG GCCCGAGTATGGTCCGCGGGCAGTCACTGTCGGCCGCCATTGACGAAATT AACGGCTTCATGTCACGGAGAGCCACAAGCGCCTGGAGACGCTCTCGCAC CCTTGCTTCGGGGGGAAATCTGCCAtaccccacctcctcgtctcgtCTTT CGGGTCCCCTTTTGCCCCTCTCGCAGAGGCAgcccgggggggcggagggt cgTGTCACTTTGGCGCCTGGCATTGGCAGCAGCACCGGCTCAGGGAGAAG CCCCGAAgcccgaggagggcgcgaTGGCAAGGGAACGAAAGttgtggaag gagagcgcgTGACGGCCTCAGCTActcaggaagaggaacagcGTTTGCCA CGTGACAGCCCCAGTCTGCTTCGAGCCTCGCTCTTGAGTAAGGCCCCACC GCTGTGGTCAGCATGGGAGCGTCTGGGGTGGACGATAGGCGACTACTTCA TGTCGTTGGTGGTCTTTGTTACCATTTCCATCACTTGGTGGCGGGGCGCC TGGAACCTCCTCGACTACTACGTCTTCCCTACCCACCGGGCCCTCCGCGC TCTTGTGCTGACCCTCGCGGGCATGACTTTTAACGTCCTGGGCTTTCTCT GctacccctccctgctgcgGTGGTCGCGTCGGATTACCTGCCGTCGAGAA AGCTACGTGTTCGGGACGGTCAAGCGCCTGGTGTTGCTGCTGCGCATGCT TGCCTCGGTGGCGCACTGGACAGGGGTCTGGGACGCCGTGGACGGGGCTT TCtgtggagaggaggcgaccagCGACTGCAGcttCGACTACAGCAGCTTG GGCACCATCACGTGCATAGGATTGGCCGGCCTGGTTGCATTGCGGCAGAT GAACGGGGCGGTCTGGGGCCCACTCTTCTCGGTGTCTTTAGACTTCCAAG ACGAGCTTGTCCTGGatacctccctccgcttccacACGAGCCAGTGGCGA Actggcggccagggagaggggccaggaggaaggttgggcgggaggggggc actGCTCTGGCATCTGCTGGATATCCTGGCGACCCAGTGGCTGCCGGACG TATTTGCCATTTTGGCTTGGTACGGGCTTTATACCTGGCTGCCGCTGCGG TGGCCGGGaacgtcgaggagggaggaactcTTGTACGTGGCGGCCGCGAT GGGGGTGGCTGTCGGGTGTTACGCCGCCCAGTTCGTGCTGGCAAGCTGGG TAGATGCCTACTATCCTCGCGCGAgtagcagcggcagcagcagcaatggg gccgggggggaagcggttttggagagagagggcgagcTGGGAGGAAGCCT GGGGAACGGCAGGCGCAGCATAGCGAGTAGAGGCAACCACAACCGGAGCA CTCAAGGCGACTTGTCCATTCCACTGCAGGTGCCGGTTCCCAAATGCTGC GAACCACCCCCCTTTCTGTCGGGAAAGTACTTGGCGGAGCTCTTACTCTA CCTGTGGGCTTTCTTAGCCGCTAACATGCTCTGGGTCTTTTGGTGGGATT TCCTCGACGACCACCTCTTGTCCGACCGGCCGCTGCTCAGCAACTTGCTC TGCGCCGTGGGTGGGCTCGCGCTGGAGTTCATGTTGAATGTGGCATCgac ggaggtggcggggggcgtCTATCTGGACGgggcagcggaggggagCTCTG GCTTGTTCTTCCCTGTGTGTTACTTCGGAGAGGTGGCCGCCTACCGGGCC AGCCTCCGGTCTGCTCAGGCCTTCGCCGTGTATCGAAAGTCGACCATGGG AGGGTTAGCGGGAAGCGCTTCTTGCTCCTTGCTAGACACCGGGGTCAGGA GCGCTCTGGAAAGTCCTGTGCGGGAGATTGCCTTGCTGCGCCCCGGGTCT ttggggcaagggggagaggctAGGGGGTGGAAGGCCGGAGTGGCGGCGGA CAAGATTGGAAAAGTGGCGGAAACGCCCACACTCGTCCATGGGGAGTCGG GCATGGGCTTGCTCGCGAATGAATCGGGGCGGTCGGACGActag back to top
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