EWM27855.1, cds2819 (CDS) Nannochloropsis gaditana

Overview
NameEWM27855.1
Unique Namecds2819
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1346619..1347011 -
Alignment locationCM002459.1:1346303..1346500 -
Alignment locationCM002459.1:1345880..1346113 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27855.1
Productthioesterase superfamily member 4
Orig transcript idgnl|cribi|Naga_100219g2.2196.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1346619..1347011 -
CM002459.1supercontigCM002459.1:1346303..1346500 -
CM002459.1supercontigCM002459.1:1345880..1346113 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR006683Thioestr_supf
IPR029069HotDog_dom
Homology
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|585110182|gb|EWM27855.1| (thioesterase superfamily member 4 [Nannochloropsis gaditana])

HSP 1 Score: 563.918 bits (1452), Expect = 0.000e+0
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
Query:    1 MLCCTCKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS 274
            MLCCTCKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS
Sbjct:    1 MLCCTCKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS 274          
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|553179824|ref|XP_005852768.1| (thioesterase superfamily member 4 [Nannochloropsis gaditana CCMP526] >gi|422295764|gb|EKU23063.1| thioesterase superfamily member 4 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0
Identity = 272/274 (99.27%), Postives = 272/274 (99.27%), Query Frame = 0
Query:    1 MLCCTCKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS 274
            MLCC CKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVER EGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS
Sbjct:    1 MLCCACKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERFEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS 274          
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|669166412|ref|XP_008618768.1| (hypothetical protein SDRG_14419 [Saprolegnia diclina VS20] >gi|530729593|gb|EQC27835.1| hypothetical protein SDRG_14419 [Saprolegnia diclina VS20])

HSP 1 Score: 98.5969 bits (244), Expect = 1.717e-21
Identity = 51/126 (40.48%), Postives = 71/126 (56.35%), Query Frame = 0
Query:  133 HLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFI 258
            H IH     + K E + VY D      ++    G+ L GH  I+HGG I+ + D   G   +      GFTANL +N+++P+   T   V   +ERIEGRKV+L+A+++DA  E   YTEATSLFI
Sbjct:   63 HYIHSLSDIQGKYEEFMVYGDVAKTQTISLVHFGEKLCGHTGIVHGGCISTVCDELFGWTMYWIMDKAGFTANLNVNFRKPLPAQTLAIVTTELERIEGRKVYLKAKVQDA--EGNTYTEATSLFI 186          
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|669166408|ref|XP_008618766.1| (hypothetical protein, variant 3 [Saprolegnia diclina VS20] >gi|530729596|gb|EQC27838.1| hypothetical protein, variant 3 [Saprolegnia diclina VS20])

HSP 1 Score: 97.0561 bits (240), Expect = 4.065e-21
Identity = 51/129 (39.53%), Postives = 71/129 (55.04%), Query Frame = 0
Query:  130 LQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFI 258
            ++ H IH       K E + V+      S  +F   G  L GH  I+HGG I+ + D   G   +      GFTANL +N+++P+   T   V   +ERIEGRKV+L+A+++DA  E   YTEATSLFI
Sbjct:   40 VEKHFIHSLRNIGGKYESFVVFGHVDKQSTTSFVHFGNSLCGHEGIVHGGCISTICDELFGWTMYWIMDKAGFTANLNVNFRKPLPAQTLAIVTTELERIEGRKVYLKAKVQDA--EGNTYTEATSLFI 166          
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|470321856|ref|XP_004349120.1| (hypothetical protein CAOG_02370 [Capsaspora owczarzaki ATCC 30864] >gi|765550584|gb|KJE91205.1| hypothetical protein CAOG_002370 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 101.293 bits (251), Expect = 5.061e-21
Identity = 53/129 (41.09%), Postives = 73/129 (56.59%), Query Frame = 0
Query:  134 LIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQS 262
            L  E L G  K E  E+Y +  D   V   +LG  + GHPD IHGG+I    D T+G   F    G G+TANL INY++P+     I V A V+R+EGRKVFL A + D     ++Y +A +LF+  ++
Sbjct:  228 LTFEALYGPGKFENVEMYHNPTDLQFVGMFKLGNRICGHPDTIHGGAIGVAFDETLGW-LFMLTAGVGYTANLNINYRKPLPALHTIVVKAHVDRVEGRKVFLHATLEDL--HGLVYADAAALFVVPRN 353          
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|813134166|ref|XP_012198063.1| (hypothetical protein SPRG_04085 [Saprolegnia parasitica CBS 223.65] >gi|641537617|gb|KDO31470.1| hypothetical protein SPRG_04085 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 95.5153 bits (236), Expect = 1.356e-20
Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 0
Query:  130 LQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFI 258
            ++ H IH       K E + V+      S  +F   G  L GH  I+HGG I+ + D   G   +      GFTANL +N+++P+   T   V   +ERIEGRKV+L+A+++DA  +   YTEATSLFI
Sbjct:   42 VEKHFIHSLRNIGGKYESFVVFGHVDKQSTTSFVHFGSSLCGHEGIVHGGCISTICDELFGWTMYWVMDKAGFTANLNVNFRKPLPAQTLAIVTTELERIEGRKVYLKAKVQDA--DGNTYTEATSLFI 168          
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|1183369284|gb|ORX95267.1| (Thioesterase/thiol ester dehydrase-isomerase [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 96.6709 bits (239), Expect = 3.275e-20
Identity = 51/127 (40.16%), Postives = 81/127 (63.78%), Query Frame = 0
Query:  134 LIHETLRGKEKIEGYEV-YKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKG-NGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFI 258
            L   TL+GK+K+    V +++ +++S+V    LGK L GH  IIHGG +A LLD  +    F +  G NG TANL INY++P++    + + ARV ++EGRK ++ A+++D K   ++  EA++LFI
Sbjct:  126 LTRYTLKGKDKLALDPVIFRNDKENSLVIVTHLGKALCGHKGIIHGGLLATLLDEGLAATVFPSMPGKNGVTANLNINYRKPVLADQFVSINARVTKVEGRKGWVEAQVKDMKGNVLV--EASALFI 250          
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|384501096|gb|EIE91587.1| (hypothetical protein RO3G_16298 [Rhizopus delemar RA 99-880])

HSP 1 Score: 93.5893 bits (231), Expect = 1.084e-19
Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 0
Query:  117 RVDTKL--HRAYPEFLQ----YHLIHETLRGKEKIEGYEV-YKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMG-VAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQS 262
            R D  L  H AY  F +    + L   TLRG  KI    V + ++    +++   LGK + GH  IIHGG  A LLD  +  VA  +  K  GFTANL +NY++PI+    + + A+++++E RK F+ A I  A+D+ + +TEATSL+I+ +S
Sbjct:   31 RTDPDLVEHTAYSHFTESQKKHSLTFTTLRGPGKIILPPVMFYNKTYTEVISIVHLGKHMCGHDGIIHGGLAATLLDEALAAVALPSLPKNFGFTANLNVNYRKPIMSDQWVVLRAKLDKLEERKAFVVAHIESAEDQTI-FTEATSLYISPKS 183          
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|727146149|emb|CEG71381.1| (hypothetical protein RMATCC62417_07124 [Rhizopus microsporus])

HSP 1 Score: 93.5893 bits (231), Expect = 1.285e-19
Identity = 58/147 (39.46%), Postives = 86/147 (58.50%), Query Frame = 0
Query:  122 LHRAYPEFLQYHLIHE----TLRGKEKI-EGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMG-VAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQS 262
            LH AY  F +    H     TLRG + I     ++ ++    +V+    GK L GH  IIHGG  A +LD  +  VA  +  K  GFTANL +NY++PI+    + V A+++++E RK F+ A I  A+D+A+L TEATSL+I+ +S
Sbjct:   39 LHEAYSHFTESQKEHSLTCSTLRGPDMIILPPLMFYNKTYTEMVSIIHFGKNLCGHDGIIHGGLAATILDEALAAVALPSLPKRFGFTANLNVNYRKPILSDQWVAVRAKLDKLEERKAFVSAHIESAEDKAIL-TEATSLYISPKS 184          
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|727135915|emb|CEG81093.1| (hypothetical protein RMATCC62417_15333 [Rhizopus microsporus])

HSP 1 Score: 92.8189 bits (229), Expect = 2.099e-19
Identity = 58/147 (39.46%), Postives = 86/147 (58.50%), Query Frame = 0
Query:  122 LHRAYPEFLQYHLIHE----TLRGKEKI-EGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMG-VAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQS 262
            LH AY  F +    H     TLRG + I     ++ ++    +V+    GK L GH  IIHGG  A +LD  +  VA  +  K  GFTANL +NY++PI+    + V A+++++E RK F+ A I  A+D+A+L TEATSL+I+ +S
Sbjct:   39 LHEAYSHFTESQKEHSLTCSTLRGPDMIILPPLMFYNKTYTEMVSIIHFGKNLCGHDGIIHGGLAATILDEALAAVALPSLPKRFGFTANLNVNYRKPILSDQWVVVRAKLDKLEERKAFVSAHIESAEDKAIL-TEATSLYISPKS 184          
The following BLAST results are available for this feature:
BLAST of EWM27855.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110182|gb|EWM27855.1|0.000e+0100.00thioesterase superfamily member 4 [Nannochloropsis... [more]
gi|553179824|ref|XP_005852768.1|0.000e+099.27thioesterase superfamily member 4 [Nannochloropsis... [more]
gi|669166412|ref|XP_008618768.1|1.717e-2140.48hypothetical protein SDRG_14419 [Saprolegnia dicli... [more]
gi|669166408|ref|XP_008618766.1|4.065e-2139.53hypothetical protein, variant 3 [Saprolegnia dicli... [more]
gi|470321856|ref|XP_004349120.1|5.061e-2141.09hypothetical protein CAOG_02370 [Capsaspora owczar... [more]
gi|813134166|ref|XP_012198063.1|1.356e-2038.76hypothetical protein SPRG_04085 [Saprolegnia paras... [more]
gi|1183369284|gb|ORX95267.1|3.275e-2040.16Thioesterase/thiol ester dehydrase-isomerase [Basi... [more]
gi|384501096|gb|EIE91587.1|1.084e-1938.31hypothetical protein RO3G_16298 [Rhizopus delemar ... [more]
gi|727146149|emb|CEG71381.1|1.285e-1939.46hypothetical protein RMATCC62417_07124 [Rhizopus m... [more]
gi|727135915|emb|CEG81093.1|2.099e-1939.46hypothetical protein RMATCC62417_15333 [Rhizopus m... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2827rna2827Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications