|
|
Properties
| Property Name | Value |
|---|
| Product | thioesterase superfamily member 4 |
| Orig transcript id | gnl|cribi|Naga_100219g2.2196.mrna |
| Orig protein id | gnl|cribi|Naga_100219g2.2196 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1345784..1347136 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2827 ID=rna2827|Name=rna2827|organism=Nannochloropsis gaditana|type=mRNA|length=3812bp
CGGACAGGCCACCGAATGGGCCGTCAACGCCTACGGCAGAAGAGAGTTCC
ACAAAATGAACATGTATTCGCTTAAAGCATCTGAGCTTGCTTAGAATTTT
CCAGATGATTGTGTGATTGCCCATTCCTTGCTGGGAAAGAGCCGAAACGT
CACGTGTTTGGGTGTGCATTGCGATTTTTTCTTTTCTGTGAGGACTTCGA
ACGCGTTCAATCGACCAAATTTTGCATCTTTTCTAATCGTCTGTCCCTAT
CGCATATTGCCAGTCTATGGCAGACGAAGGCAGCCAAGTCGATCCGCGCG
GCGAACAGCCCGAAGTGAGGTCGATTCAAAGCTTGATAGGCGCCCTGCTC
CCGGCACTCATAATTGGCATTCTCTACCTTGTAGCTTGGTGGTTTCTGAG
CAGGCGATTTTGCGATATTTATGATTGCAAGCGTCGGCGTCTTGATTTAC
TTCGTGAGGAATGCAAACGCAATAATGCGAGACCCCGGCCTCGAACCCCT
GGCTGGCCAGAGGCCTTCGTGGACGCGACGACAGACACTGGGAACCAAAG
TGAGGCCAATGACAGTAGAGATGCGAATCTTTCCACGACCTTACCCGCAG
CGATAGGTATGGACTCTGTGCCGATATGGCCGCCGCAAGCAGCTCCACCA
TCGCCACCTCCAGCTTCTAGGATGGCGCCCGCCCGTACCTTGCTATCCAA
TAATCCCTTTGTGTGGCTCGTGACCTTGTGGCGTACCTCAGAGAAAGATA
TTATTGAATGCGTCGGTTCGGATGCCTACATGTTTTTGCGCTTTTTACGC
CTTGGATGCTGGATCAGTCTTGTAGCAACGGTGCTGGGTCTTTGCATACT
ACTGCCCGTGAACGTGGTCGGTGGCAACCACCTTGCACAACTCGAGCGCC
TTTCCTTATCCAATGTTGCAGATCAGTCTAGTTTGCTCTGGGTACCTCTG
ATAATTGCGTACCTTTTGGGCGGCTTGGCGTTGTACGTGTTGCATCGTGA
GTACATTGTGTACGTCGAACTGCGCCAACGGTATTTGCGCGCTCCCACAG
CACAGAATTATTCTGTCCTCGTGCGCGATATCCCCCAACCTATGGATTGC
GATGCACTGTTGTCTTACCTACGTAATCTGCTAGGCGAAGACGTAGCTGC
CGTCCATTGTGTAAACCGTCATCGACGCGCGCGCTACGACCGGTTGACAA
GGCGCAAAGACGCAGCATTATTGCGTCTTGCACGGGCAGAGAATGAATTG
CAGGCAACCGGTGGCTTGCATCGTCCCGTCCACAGAGACTTTTGTCATGT
GTTTGGTGCCCCCTTTCGCTTGCTTCCGGCGTGGGGACCTCACATCGACA
CGATCGGAGCCATGGAAAATGAGATAGGGCAGTGCAATCGACTGTTATCT
TTAGTCAGGGACGAGCGCGAGGCGCTTGAAAGCCTTGAAAGTCAAGTACA
TGCCTGTATTTTGACCCTAGGCTCAGTACGTGTCGCCACTGCGTCGAAGA
CCATCCCTTTTCAGCCCCGTACCGAGTATTTCTCTGCCAGCGAGGCTCCT
GCTCCCGCACAGCTCCTGTGGCAACACATTTGCTCTTCTCAACGGGAGCG
CTATATTCGAAACGTGCTTGTATGGTCGATAGTAGCTGCGGCCATACTTG
GCTACACTGTACCTGTGGCCTTTGCCTCCTCCTTGGCGAATTTGACCGCC
CTCTCACGTACCCAGGCATTCACCTGGTTGAGGCCTTTGGTGGATGCCAG
CCCGGCCTTGACAGCCTTCATCCAAGGCTTCTTGCCGCCGCTCATCGTGG
TTTATCTACTCAGTCTTGTTCCCTCTTTTATGAAAGCTTTGAGTCGGAGC
CAGCACCTTGTTTCCGACGTCGAGTGCGAGAACGCGGCCATCTACAAAGT
TTTCCTCTTCGCGCTCTTTGACATATTTTTGGCATATACCATCGCGGGCT
CCTTTTTGTCCAAAATTCAGCAAGTGATCGATCTCGCCGAAAATCCATCA
CAAGTTTCAAACCTTTTCGCAACGACGCTGCCCGCGCAGTCCACCTTTTT
CATGACGTATATCGCCCTCGCAGCTCTGAGTGGGCTACCTGGAGAACTTT
CACGTCTCGGCGCACTTGTCATGATAAGCCTAAAAAAGAGATTTTCGCGT
GGAAGTCGTAGTCTCTGGGATGAGCTGAATTTGTTGACTCAACCCATGGG
CCTGCACGAGCTGTATAACTTACCCCTCGTAGTTTTCCTGGCGCTTGTCA
CCTATTCTACCGTGGCACCTCTCGTTTCACTTTTTGCGCTTCTGTTCTTT
GCACTTGCCTACCCCGTCTACGTGCATCAACTCATGTATGTGTATCAACC
GACCTCCCACACCGGTGGTACGCAATGGCCAATTGTCTCTGGCTGCTGCG
TTGCGGCATTACTGCTGCAGCAGGTGCTCCTTCTTGGTATCTTCAGCATT
AAAAGAGGATTCGCCCAAGCTGCACTGCTTTTGCCATTGCTGGTGGTCAC
TGTCACGTTAGGCTTGTACCATCATTCCATGTATACACCCGTGGCGGCAG
TTGCCACCCTTGAGAGCTTGGCCTCTACTGACATTGCGGAATATGGCCCC
ACCTCTTGGACGGCTTTAAAGCAAGCTTACTCACCGTACTCGGATAAGGG
GCAGACGAACGACGTATCGAAAGCAAGGCTCTATCTGTGGACTGAGCCAT
ACGGCGTACTGACTCAAGGTGTGTTTAGTGAAGGGCAGAGAGTGCCGGTG
TCGGCTATCAACACGATCCCTGAGGAGGAGTTGTCGGGTACTGACAGTTC
AGAACAAGGTCTGAAGCGGGCTCAAAACGCATCAATGGACTATGGAACTC
TAGCAGGCGAGGATTCCGTTGTTGACACCAAACGAGATGTATAAAACATA
GCCTTTTGTCCAGACAGGAGAGCTCTGGTGAGCGAATCTCCTTGCGTTTG
TTATGCGTAAATGAAACGTCTTTGAAGACGAAGAAGTGATCAAATTGTGA
AAAGACAAAGACTGTGCAGATTGTGCAGATAAGGTGGATCAATGTATACT
GTAAGGGGTATCTCGAAGAACAGTGTACGAAATAATAGGGAAAATAATTA
ATACGCTTCCTCATTCACGAATAAAGAGAGAATGTCGTCGGATGGGATAG
CTTTATTCGGCAACCTACGGAGCGAGTAGGAATGTATTTTTTGATGGCAC
AAAAGTACTACTACAATGCTAACTGATGTCCACCTTCTTCGGTCCCGTAA
GCAGAGGACTTTGTGAAGTTATGAAGAGGGATGTGGCTTCCGTGTACAAC
ACTGCCTCGTCCTTAGCATCTCGAATCTCTGCTCGTAGGAAAACCTTACG
TCCTTCAATCCGCTCCACTCGGGCCAAGACCTTGATCTCGGTGCCACAAA
TGATCGGCCTCTTGTAATTGATTGTGAGGTTGGCAGTGAAGCCATTACCT
TTCTATTTGGCGTTATAAAGTGCGGGCATATATGAGTACCAACGCGTCAC
TCCGACAACCCTCCAACTGTATATCCACACATCAGTCTTAGTCACGCGGC
TTAAACATTTGGTGCCTGCACCACGGTTGTTGAGCCGATATAATTGTGAC
TACCCTCCGAAAGATTGCATAGCATCCCGGGAGCCCCTTACATTGGCAGC
GAAGAATGCCACGCCCATAGTGTTGTCGAGTAAGGCGGCTATAGAGCCTC
CATGGATTATATCCGGATGCCCGCTGAGAAGCTTCCCGAGGCGAGCAAAT
GCTACGATAGAATCGTCACGCCTATCTTTGTACACCTCGTAGCCCTCTAT
CTTTTCCTTGCC back to topprotein sequence of rna2827 >rna2827-protein ID=rna2827-protein|Name=rna2827|organism=Nannochloropsis gaditana|type=polypeptide|length=274bp
MLCCTCKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATC
GTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGA
PVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEV
YKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGN
GFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLY
TEATSLFITSQSPLLTGPKKVDIS back to topmRNA from alignment at CM002459.1:1345784..1347136- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2827 ID=rna2827|Name=rna2827|organism=Nannochloropsis gaditana|type=mRNA|length=1353bp|location=Sequence derived from alignment at CM002459.1:1345784..1347136- (Nannochloropsis gaditana)
AAGTTTGTTCGTGACGTTTCCTGTTCCTTCAAAGCGATGTCGTAGCGCGT
GCTGCACCGGCAATCATCTAAAATTACATTATTTTCATACGCTCAATCAA
TCACAGGATCTGGATAAGGGTGAAAATGCTATGTTGCACCTGTAAATCAG
TGCATGCGACTATTAGTGTCGCCTTTATTGGTACTCGGAAGCCACATCGT
TTGCCTGCATTGTTTCCATTGTTCCTTGCCCCGGCCCGAGCACTCAGCCA
TCAGGAGCCGAACCCTGCAACGTGCGGGACGCAAAACTCATCCTTCTCGA
TCTTGTTGAAAACGGTAGTAGCAGGATCATTCGTCGGTGCGGCATTCATC
GCTGGGCATACAGCAGGGGCTAGCTGTGATGAAGTAAAGTCTCCGCAGGA
GGTGAACAATGTAGGAGGCGGCGCCCCAGTGACTGCCCCCTACACGGTCA
CTTTTGCGTCCAATTATCATGATCGAGTGGACACAAAACTTCATAGAGCT
TATCCTGAGTTTTTACAGGTTTGTACACCGATCTGATCGTTTTTTTTCCC
AATCTTTGTTTTTTGTCCGGCTTTCTTTTGCTCGGGATGTACCGCTCACA
TGGTAAGCATCTCTTATTTTTTGGGGGTTGGGGCAGTACCATCTTATTCA
TGAAACGCTTCGAGGCAAGGAAAAGATAGAGGGCTACGAGGTGTACAAAG
ATAGGCGTGACGATTCTATCGTAGCATTTGCTCGCCTCGGGAAGCTTCTC
AGCGGGCATCCGGATATAATCCATGGAGGCTCTATAGCCGCCTTACTCGA
CAACACTATGGGCGTGGCATTCTTCGCTGCCAATGTAAGGGGCTCCCGGG
ATGCTATGCAATCTTTCGGAGGGTAGTCACAATTATATCGGCTCAACAAC
CGTGGTGCAGGCACCAAATGTTTAAGCCGCGTGACTAAGACTGATGTGTG
GATATACAGTTGGAGGGTTGTCGGAGTGACGCGTTGGTACTCATATATGC
CCGCACTTTATAACGCCAAATAGAAAGGTAATGGCTTCACTGCCAACCTC
ACAATCAATTACAAGAGGCCGATCATTTGTGGCACCGAGATCAAGGTCTT
GGCCCGAGTGGAGCGGATTGAAGGACGTAAGGTTTTCCTACGAGCAGAGA
TTCGAGATGCTAAGGACGAGGCAGTGTTGTACACGGAAGCCACATCCCTC
TTCATAACTTCACAAAGTCCTCTGCTTACGGGACCGAAGAAGGTGGACAT
CAGTTAGCATTGTAGTAGTACTTTTGTGCCATCAAAAAATACATTCCTAC
TCGCTCCGTAGGTTGCCGAATAAAGCTATCCCATCCGACGACATTCTCTC
TTT back to topCoding sequence (CDS) from alignment at CM002459.1:1345784..1347136- >rna2827 ID=rna2827|Name=rna2827|organism=Nannochloropsis gaditana|type=CDS|length=2475bp|location=Sequence derived from alignment at CM002459.1:1345784..1347136- (Nannochloropsis gaditana)
AAAGGTAATGGCTTCACTGCCAACCTCACAATCAATTACAAGAGGCCGAT
CATTTGTGGCACCGAGATCAAGGTCTTGGCCCGAGTGGAGCGGATTGAAG
GACGTAAGGTTTTCCTACGAGCAGAGATTCGAGATGCTAAGGACGAGGCA
GTGTTGTACACGGAAGCCACATCCCTCTTCATAACTTCACAAAGTCCTCT
GCTTACGGGACCGAAGAAGGTGGACATCAGTTAGTACCATCTTATTCATG
AAACGCTTCGAGGCAAGGAAAAGATAGAGGGCTACGAGGTGTACAAAGAT
AGGCGTGACGATTCTATCGTAGCATTTGCTCGCCTCGGGAAGCTTCTCAG
CGGGCATCCGGATATAATCCATGGAGGCTCTATAGCCGCCTTACTCGACA
ACACTATGGGCGTGGCATTCTTCGCTGCCAATATGCTATGTTGCACCTGT
AAATCAGTGCATGCGACTATTAGTGTCGCCTTTATTGGTACTCGGAAGCC
ACATCGTTTGCCTGCATTGTTTCCATTGTTCCTTGCCCCGGCCCGAGCAC
TCAGCCATCAGGAGCCGAACCCTGCAACGTGCGGGACGCAAAACTCATCC
TTCTCGATCTTGTTGAAAACGGTAGTAGCAGGATCATTCGTCGGTGCGGC
ATTCATCGCTGGGCATACAGCAGGGGCTAGCTGTGATGAAGTAAAGTCTC
CGCAGGAGGTGAACAATGTAGGAGGCGGCGCCCCAGTGACTGCCCCCTAC
ACGGTCACTTTTGCGTCCAATTATCATGATCGAGTGGACACAAAACTTCA
TAGAGCTTATCCTGAGTTTTTACAGAAAGGTAATGGCTTCACTGCCAACC
TCACAATCAATTACAAGAGGCCGATCATTTGTGGCACCGAGATCAAGGTC
TTGGCCCGAGTGGAGCGGATTGAAGGACGTAAGGTTTTCCTACGAGCAGA
GATTCGAGATGCTAAGGACGAGGCAGTGTTGTACACGGAAGCCACATCCC
TCTTCATAACTTCACAAAGTCCTCTGCTTACGGGACCGAAGAAGGTGGAC
ATCAGTTAGTACCATCTTATTCATGAAACGCTTCGAGGCAAGGAAAAGAT
AGAGGGCTACGAGGTGTACAAAGATAGGCGTGACGATTCTATCGTAGCAT
TTGCTCGCCTCGGGAAGCTTCTCAGCGGGCATCCGGATATAATCCATGGA
GGCTCTATAGCCGCCTTACTCGACAACACTATGGGCGTGGCATTCTTCGC
TGCCAATATGCTATGTTGCACCTGTAAATCAGTGCATGCGACTATTAGTG
TCGCCTTTATTGGTACTCGGAAGCCACATCGTTTGCCTGCATTGTTTCCA
TTGTTCCTTGCCCCGGCCCGAGCACTCAGCCATCAGGAGCCGAACCCTGC
AACGTGCGGGACGCAAAACTCATCCTTCTCGATCTTGTTGAAAACGGTAG
TAGCAGGATCATTCGTCGGTGCGGCATTCATCGCTGGGCATACAGCAGGG
GCTAGCTGTGATGAAGTAAAGTCTCCGCAGGAGGTGAACAATGTAGGAGG
CGGCGCCCCAGTGACTGCCCCCTACACGGTCACTTTTGCGTCCAATTATC
ATGATCGAGTGGACACAAAACTTCATAGAGCTTATCCTGAGTTTTTACAG
AAAGGTAATGGCTTCACTGCCAACCTCACAATCAATTACAAGAGGCCGAT
CATTTGTGGCACCGAGATCAAGGTCTTGGCCCGAGTGGAGCGGATTGAAG
GACGTAAGGTTTTCCTACGAGCAGAGATTCGAGATGCTAAGGACGAGGCA
GTGTTGTACACGGAAGCCACATCCCTCTTCATAACTTCACAAAGTCCTCT
GCTTACGGGACCGAAGAAGGTGGACATCAGTTAGTACCATCTTATTCATG
AAACGCTTCGAGGCAAGGAAAAGATAGAGGGCTACGAGGTGTACAAAGAT
AGGCGTGACGATTCTATCGTAGCATTTGCTCGCCTCGGGAAGCTTCTCAG
CGGGCATCCGGATATAATCCATGGAGGCTCTATAGCCGCCTTACTCGACA
ACACTATGGGCGTGGCATTCTTCGCTGCCAATATGCTATGTTGCACCTGT
AAATCAGTGCATGCGACTATTAGTGTCGCCTTTATTGGTACTCGGAAGCC
ACATCGTTTGCCTGCATTGTTTCCATTGTTCCTTGCCCCGGCCCGAGCAC
TCAGCCATCAGGAGCCGAACCCTGCAACGTGCGGGACGCAAAACTCATCC
TTCTCGATCTTGTTGAAAACGGTAGTAGCAGGATCATTCGTCGGTGCGGC
ATTCATCGCTGGGCATACAGCAGGGGCTAGCTGTGATGAAGTAAAGTCTC
CGCAGGAGGTGAACAATGTAGGAGGCGGCGCCCCAGTGACTGCCCCCTAC
ACGGTCACTTTTGCGTCCAATTATCATGATCGAGTGGACACAAAACTTCA
TAGAGCTTATCCTGAGTTTTTACAG back to top
|