EWM27855.1, cds2819 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|585110182|gb|EWM27855.1| (thioesterase superfamily member 4 [Nannochloropsis gaditana]) HSP 1 Score: 563.918 bits (1452), Expect = 0.000e+0 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0 Query: 1 MLCCTCKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS 274 MLCCTCKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS Sbjct: 1 MLCCTCKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS 274
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|553179824|ref|XP_005852768.1| (thioesterase superfamily member 4 [Nannochloropsis gaditana CCMP526] >gi|422295764|gb|EKU23063.1| thioesterase superfamily member 4 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0 Identity = 272/274 (99.27%), Postives = 272/274 (99.27%), Query Frame = 0 Query: 1 MLCCTCKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS 274 MLCC CKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVER EGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS Sbjct: 1 MLCCACKSVHATISVAFIGTRKPHRLPALFPLFLAPARALSHQEPNPATCGTQNSSFSILLKTVVAGSFVGAAFIAGHTAGASCDEVKSPQEVNNVGGGAPVTAPYTVTFASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERFEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS 274
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|669166412|ref|XP_008618768.1| (hypothetical protein SDRG_14419 [Saprolegnia diclina VS20] >gi|530729593|gb|EQC27835.1| hypothetical protein SDRG_14419 [Saprolegnia diclina VS20]) HSP 1 Score: 98.5969 bits (244), Expect = 1.717e-21 Identity = 51/126 (40.48%), Postives = 71/126 (56.35%), Query Frame = 0 Query: 133 HLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFI 258 H IH + K E + VY D ++ G+ L GH I+HGG I+ + D G + GFTANL +N+++P+ T V +ERIEGRKV+L+A+++DA E YTEATSLFI Sbjct: 63 HYIHSLSDIQGKYEEFMVYGDVAKTQTISLVHFGEKLCGHTGIVHGGCISTVCDELFGWTMYWIMDKAGFTANLNVNFRKPLPAQTLAIVTTELERIEGRKVYLKAKVQDA--EGNTYTEATSLFI 186
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|669166408|ref|XP_008618766.1| (hypothetical protein, variant 3 [Saprolegnia diclina VS20] >gi|530729596|gb|EQC27838.1| hypothetical protein, variant 3 [Saprolegnia diclina VS20]) HSP 1 Score: 97.0561 bits (240), Expect = 4.065e-21 Identity = 51/129 (39.53%), Postives = 71/129 (55.04%), Query Frame = 0 Query: 130 LQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFI 258 ++ H IH K E + V+ S +F G L GH I+HGG I+ + D G + GFTANL +N+++P+ T V +ERIEGRKV+L+A+++DA E YTEATSLFI Sbjct: 40 VEKHFIHSLRNIGGKYESFVVFGHVDKQSTTSFVHFGNSLCGHEGIVHGGCISTICDELFGWTMYWIMDKAGFTANLNVNFRKPLPAQTLAIVTTELERIEGRKVYLKAKVQDA--EGNTYTEATSLFI 166
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|470321856|ref|XP_004349120.1| (hypothetical protein CAOG_02370 [Capsaspora owczarzaki ATCC 30864] >gi|765550584|gb|KJE91205.1| hypothetical protein CAOG_002370 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 101.293 bits (251), Expect = 5.061e-21 Identity = 53/129 (41.09%), Postives = 73/129 (56.59%), Query Frame = 0 Query: 134 LIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQS 262 L E L G K E E+Y + D V +LG + GHPD IHGG+I D T+G F G G+TANL INY++P+ I V A V+R+EGRKVFL A + D ++Y +A +LF+ ++ Sbjct: 228 LTFEALYGPGKFENVEMYHNPTDLQFVGMFKLGNRICGHPDTIHGGAIGVAFDETLGW-LFMLTAGVGYTANLNINYRKPLPALHTIVVKAHVDRVEGRKVFLHATLEDL--HGLVYADAAALFVVPRN 353
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|813134166|ref|XP_012198063.1| (hypothetical protein SPRG_04085 [Saprolegnia parasitica CBS 223.65] >gi|641537617|gb|KDO31470.1| hypothetical protein SPRG_04085 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 95.5153 bits (236), Expect = 1.356e-20 Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 0 Query: 130 LQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFI 258 ++ H IH K E + V+ S +F G L GH I+HGG I+ + D G + GFTANL +N+++P+ T V +ERIEGRKV+L+A+++DA + YTEATSLFI Sbjct: 42 VEKHFIHSLRNIGGKYESFVVFGHVDKQSTTSFVHFGSSLCGHEGIVHGGCISTICDELFGWTMYWVMDKAGFTANLNVNFRKPLPAQTLAIVTTELERIEGRKVYLKAKVQDA--DGNTYTEATSLFI 168
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|1183369284|gb|ORX95267.1| (Thioesterase/thiol ester dehydrase-isomerase [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 96.6709 bits (239), Expect = 3.275e-20 Identity = 51/127 (40.16%), Postives = 81/127 (63.78%), Query Frame = 0 Query: 134 LIHETLRGKEKIEGYEV-YKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKG-NGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFI 258 L TL+GK+K+ V +++ +++S+V LGK L GH IIHGG +A LLD + F + G NG TANL INY++P++ + + ARV ++EGRK ++ A+++D K ++ EA++LFI Sbjct: 126 LTRYTLKGKDKLALDPVIFRNDKENSLVIVTHLGKALCGHKGIIHGGLLATLLDEGLAATVFPSMPGKNGVTANLNINYRKPVLADQFVSINARVTKVEGRKGWVEAQVKDMKGNVLV--EASALFI 250
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|384501096|gb|EIE91587.1| (hypothetical protein RO3G_16298 [Rhizopus delemar RA 99-880]) HSP 1 Score: 93.5893 bits (231), Expect = 1.084e-19 Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 0 Query: 117 RVDTKL--HRAYPEFLQ----YHLIHETLRGKEKIEGYEV-YKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMG-VAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQS 262 R D L H AY F + + L TLRG KI V + ++ +++ LGK + GH IIHGG A LLD + VA + K GFTANL +NY++PI+ + + A+++++E RK F+ A I A+D+ + +TEATSL+I+ +S Sbjct: 31 RTDPDLVEHTAYSHFTESQKKHSLTFTTLRGPGKIILPPVMFYNKTYTEVISIVHLGKHMCGHDGIIHGGLAATLLDEALAAVALPSLPKNFGFTANLNVNYRKPIMSDQWVVLRAKLDKLEERKAFVVAHIESAEDQTI-FTEATSLYISPKS 183
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|727146149|emb|CEG71381.1| (hypothetical protein RMATCC62417_07124 [Rhizopus microsporus]) HSP 1 Score: 93.5893 bits (231), Expect = 1.285e-19 Identity = 58/147 (39.46%), Postives = 86/147 (58.50%), Query Frame = 0 Query: 122 LHRAYPEFLQYHLIHE----TLRGKEKI-EGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMG-VAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQS 262 LH AY F + H TLRG + I ++ ++ +V+ GK L GH IIHGG A +LD + VA + K GFTANL +NY++PI+ + V A+++++E RK F+ A I A+D+A+L TEATSL+I+ +S Sbjct: 39 LHEAYSHFTESQKEHSLTCSTLRGPDMIILPPLMFYNKTYTEMVSIIHFGKNLCGHDGIIHGGLAATILDEALAAVALPSLPKRFGFTANLNVNYRKPILSDQWVAVRAKLDKLEERKAFVSAHIESAEDKAIL-TEATSLYISPKS 184
BLAST of EWM27855.1 vs. NCBI_GenBank
Match: gi|727135915|emb|CEG81093.1| (hypothetical protein RMATCC62417_15333 [Rhizopus microsporus]) HSP 1 Score: 92.8189 bits (229), Expect = 2.099e-19 Identity = 58/147 (39.46%), Postives = 86/147 (58.50%), Query Frame = 0 Query: 122 LHRAYPEFLQYHLIHE----TLRGKEKI-EGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMG-VAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQS 262 LH AY F + H TLRG + I ++ ++ +V+ GK L GH IIHGG A +LD + VA + K GFTANL +NY++PI+ + V A+++++E RK F+ A I A+D+A+L TEATSL+I+ +S Sbjct: 39 LHEAYSHFTESQKEHSLTCSTLRGPDMIILPPLMFYNKTYTEMVSIIHFGKNLCGHDGIIHGGLAATILDEALAAVALPSLPKRFGFTANLNVNYRKPILSDQWVVVRAKLDKLEERKAFVSAHIESAEDKAIL-TEATSLYISPKS 184 The following BLAST results are available for this feature:
BLAST of EWM27855.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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