EWM27919.1, cds2750 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585110259|gb|EWM27919.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 1333.93 bits (3451), Expect = 0.000e+0 Identity = 644/644 (100.00%), Postives = 644/644 (100.00%), Query Frame = 0 Query: 1 MMTHEDYKDASVVDQTPTNNLAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK 644 MMTHEDYKDASVVDQTPTNNLAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK Sbjct: 1 MMTHEDYKDASVVDQTPTNNLAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK 644
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|553189117|ref|XP_005854935.1| (atp-binding cassette [Nannochloropsis gaditana CCMP526] >gi|422294123|gb|EKU21423.1| atp-binding cassette [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1328.15 bits (3436), Expect = 0.000e+0 Identity = 641/644 (99.53%), Postives = 641/644 (99.53%), Query Frame = 0 Query: 1 MMTHEDYKDASVVDQTPTNNLAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK 644 M THEDY DASVVDQTPTNN AVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK Sbjct: 1 MTTHEDYMDASVVDQTPTNNFAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK 644
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585106190|gb|EWM24668.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0 Identity = 316/561 (56.33%), Postives = 406/561 (72.37%), Query Frame = 0 Query: 78 LGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLR 638 +GPSGAGKTTLLECISLRNR F+G V YD + P G FFT S VHQ ++L+GF+TPREHL FHAIARMS + + E + RVEEV+ VKLEKCADT++GG+DP++ KG+SGGERKRL+IA ELL ++IFLDEPSSGLDSVMSESIF TLKDLT GRIV+A+VHCPSS+ F++++LLT DGRLAY G A+ YF ++L +CP++YNP+DF L+L+SA PG +E RM+ L AY S M + PL D+ HK V G AS W FK+NLWR +QL RD +T +LW VSAL+G LFG+LYWQ A SNWRNL+GL+FS VV N+FT L V+MRFP++W +VVRE+ SG+NA+GPY++ARF P+ YGP L+ +++YW TGMD D G ++IF L F+S NW+ S+GQ++SSFSANP + +TI+P FV PMIMFSG+L ERSSVP WL+W++ +S+VNY+F LM QQ+HILP +V QF++ NP MGW++GMLWI+ FQ+LTY+NL +RLR Sbjct: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMS--------------------------KNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYF-SSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGH-ASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLR 533
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585108726|gb|EWM26638.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0 Identity = 328/618 (53.07%), Postives = 433/618 (70.06%), Query Frame = 0 Query: 21 LAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLR 638 ++V I+H LEWHVE++ V A KG + ILQ +AG SG+LTAI+GPSG GKTTLLECISLRNR FDG V +DG+AP G FT+S VHQ ++L+GF+TPRE+LTFH +ARM +R Q + +R++EV++ +KLEKCADTL+GG+DP F KG+SGGERKRL IA E+L +IFLDEPSSGLDSVMSESIFQ+LKDL GRIV+A+VHCPSS+ LFS+L+LLT DGR+AY GP Q + YF +AL CP+HYNPADF L+L+S PG + E++RMD L+ A+ +S M++ PLP D+KH+ L V G AS + F KLN WR L+L RD+ ++LW +S ++G L G++Y Q A ++WRNL+GL+FS VV ++F G LGV+MRFP EW ++VRE SG NAVGPY+ A F+ LP++YGP L+ +++YW TGMDP+ YL F I++SF+ +C LGQ++SS S NP+V MTI+P FV PMIMFSG+L ++S+VPVWL+W+ VS++NY+F LMA+Q+HILP NQ ++ FI N G NV LWI++AA +LTY L VRLR Sbjct: 18 VSVGIRHTLEWHVEAYMVP-----AGKKGE-------FRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARME---------------HTHTRAQ-----------IDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYF-SALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLR 596
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585109266|gb|EWM27089.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 467.233 bits (1201), Expect = 8.243e-154 Identity = 262/631 (41.52%), Postives = 381/631 (60.38%), Query Frame = 0 Query: 25 IQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRI-VIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPG--VPLQEELRRM-DALSLAYAQSFMKIQNP-LPA----------DDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRAS 640 + ++L WH+ SFKV +R K + K+IL VAG +V GE+TAI+G SGAGKTTLLEC++LR+R F G V ++G+A G +FT SA VHQ ++L GFLT EHL FH ARMS ++ S + + RV VI V L KC TL+GG N KG+SGGERKRLTIATELL + IFLDEP++ LDSVM+ + L+ L RI V+AT+H PSS+ + LFS+++LLT DGRLA+ G + AL Y + L P YNPAD ++ LV ++PG +EE R+ D L ++A S +P LP ++ H++L V+GQ AS W F+LNL RG LQ +R+ ++ L+ V +IG FG LY+Q AAS+WRNL+GL+++ VV ++ L V++R P++W L++RE+ +GANA GPY++A+ LP +YGP+L+ + +YW TG+ P +L F + + ++ + S SANP++ + I+P F+TPM++FSG L + +++P +LAW+ +S+VNY F L+ Q +LP V +F+ +P +G N+ ML +T F LTY+ L +RLR + Sbjct: 38 LPNQLTWHIRSFKVGSQRCWPWTKRSIQR-----KSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMS--------------------------DRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAAS--AYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTA 635
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585109183|gb|EWM27013.1| (white [Nannochloropsis gaditana]) HSP 1 Score: 424.091 bits (1089), Expect = 3.660e-137 Identity = 233/599 (38.90%), Postives = 353/599 (58.93%), Query Frame = 0 Query: 54 TTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQG-----RIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVR---GQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHIL-PGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSV 643 +T K IL +AG V+GE TA++GPSGAGKTTL++CI+LR R+F+G + DG++P+ +FT + +VHQ ++ + LT REHL FHAI R+ G K + + +RV+EVI V+L +CADT+IGG + VKG+SGGERKRL+I TELL +IIFLDEP+SGLDSVM E + L L T R+++ +H PSS+ + FS+++LL G +AY G YF++ LG + P +YNPADF LE+VSA+PG +Q + + A M+ N LP + H V G GA + K+N+WR Q +RD+ TL + ++G +FG+L+ A S+WRNLMG++F+ VV + + V ++FP+EW++ +RE+ +GANA+GPY I R +P +L+ + YW +G+ +++ + IF S G SSFSA+P++ + I P TPMI+FSG+L ERSSVP++L WI+++SVVNY F L+ + + L G +V F+Q + G +G L+ L ++ +++ L++R+R + S+ Sbjct: 60 STPKGKQILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGG--------------------------KYTKDQCMKRVDEVINEVELARCADTIIGGGEFAL-VKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKS-LGYDVPPNYNPADFALEVVSAKPGAEVQGKTAVWIVENFA---KRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYATSL 627
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585106124|gb|EWM24607.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 384.415 bits (986), Expect = 2.946e-121 Identity = 221/605 (36.53%), Postives = 337/605 (55.70%), Query Frame = 0 Query: 29 LEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQG--RIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAE---------PGVPLQE-------------ELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDW-VFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQ-LAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFN 607 LEW++ +++++++ + + T+L+ +AG A +G A++GPSG GKT+LL+C++LR R+F+G + +G+A G +F + +VHQ ++ + LT REHL FHA+ +S S E RVE V+ V L K D IGG D ++ V GISGGERKRL IATELL I+ LDEP+SGLDSVM E + LK + Q R+V+A +H PSS+ + L S++ LLT G LAY GP + L + + LG CP ++NPADF+LEL SA+ GV QE E L A + + PL +++HK + V+G GAS+W V F+ NLWR L R+ + L + ++ +G +FGVLY+Q + N RN G +FS +V + + V M FP ++ +++RE+ +G N+ Y + R + P S ++M + Y+ G+ P A + + L+F N++ S+G SSFSANP+V ++I+P F+TPMI+FSG+L ER+SVP L WI+D+SV+NY+F ++ Q+ + G + F+Q Sbjct: 75 LEWNISKYEIKLKKRK-------------SLTVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLS--------------------------RHKSLEECIARVEAVMEEVDLTKVGDQKIGGGD-LYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEG-LGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIK 638
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585102173|gb|EWM21831.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 334.724 bits (857), Expect = 1.044e-101 Identity = 204/627 (32.54%), Postives = 336/627 (53.59%), Query Frame = 0 Query: 28 KLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEE--LRRMDALSLAYAQSFMKIQN-----PLPADD---KHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALI-GALFGVLYWQLAAS--NWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLS-YGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMH----------ILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTY 630 +L W F + ++ ++ K + S + K IL VAG SG++ A++G SGAGK+T L+C+SLRN+ F G V +G+ + +++ ++ FV+Q D+ +T REHLTFHA+ RM+ + E RVE+V+ V + C +T+IGG P +GISGGE+KRL TELL I+F DEP+SGLDS M+ + T+++L G+I++ +H PSS+T+ LF++L+LL GR+ Y+GP A SYF ++LG+ CP +NPADF + +S VP ++E + R+ +L AY S + N +PA+ KHKA+ ++ AS W F + R +Q R T + +++L+ G + G +Y+ + + +N+MGL F ++ GV+ FP E + +RE SGAN V Y +AR + LP + P + ++I+Y + P AG + ++ + S+G ISS +++ VA + P F+ PM +F+GLL++ +++PVWL W++ S++ Y + L+ Q G V ++ +P+K+G +G+L L F++L + Sbjct: 122 ELAW---DFSLSVKATKREAKLSGSYS----KEILSNVAGSVKSGQMMAVMGSSGAGKSTFLDCVSLRNQQFSGNVYINGKPADEKYYFMTGFVYQEDLFIPTMTVREHLTFHAMVRMN--------------------------SDIPVEKRLERVEDVLMEVAMSHCPETIIGG--PGTGYRGISGGEKKRLAFGTELLNNPSIVFADEPTSGLDSFMTRGVCMTMRELADDGKIIMCVIHQPSSQTFDLFTHLLLL-AKGRIVYNGPMATLQSYF-SSLGVICPHFHNPADFFINQISI---VPTEQEASMARLQSLWDAYENSNLAAGNMAWKAEMPAEILNLKHKAV-SMKHFHASTWTQFYYTMKR-NIQNEFRRATDVKAKFMNSLVMGMILGTIYFGQTDTQESAKNIMGLFFLIIMFQTMVSMFGVLQAFPSECKVFIRENLSGANRVSSYFLARTLSELPSTIIYPSIFAAIVYGMADLQPTAGRFYFYIFTIILVANCATSVGYMISSMTSHEAVAYALAPLFLMPMALFAGLLLDLNTIPVWLRWLDFFSIIKYGYQLLIINQYTDRELSCVGSLFCRWKTGTAVMNYVGTSPQKVGETMGILVALIIIFRLLAF 706
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|298713079|emb|CBJ48854.1| (ABC transmembrane transporter [Ectocarpus siliculosus]) HSP 1 Score: 291.582 bits (745), Expect = 9.983e-87 Identity = 195/610 (31.97%), Postives = 308/610 (50.49%), Query Frame = 0 Query: 74 LTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLS-AFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQS--FMKIQNPLPADDKHKALHDVRGQGASD---------------WVFFKLNLWRGGLQLARDRITLILWAAV--------SALIGALFGVLYWQLAAS--NWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLS-YGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTL------MAQQMHILPGNQ------GEVVQQFIQFN--PRKMGWNVGMLWILTAAFQVLTYVNLRVRLRAS 640 + AI+GPSGAGKT+LL C+SLRN+++ G V ++G+ P+ ++ AFV Q D+ LTPREHL FHA RMS RT +S E + VE + + L KCA+T IGG ++GISGGE+KRL+ ATE+L +IF+DEP+SGLDS M+E++ L+ L GR ++AT+H PSS + LFS+L LL +G+ Y GP +A ++F+ A+G CP YNPAD ++++S +P E RR+ A + Y QS + + + LP A +V+ D ++ WR +++ + I + V + ++ L G+++ QL S + ++ MG++F + G +GV+ FP E + +RE SGA V Y R +P+ P + S IIY G +A +L+F++ V + S SLG +S+F+ + VA+ + P + P I+F GLLI S +PV+ W S + Y + + + + P + G+ V +++F R++ N L L F++L + L R R + Sbjct: 1 MLAIMGPSGAGKTSLLNCLSLRNQSYSGTVLHNGKPPDMDMVGITTAFVQQEDLFIPTLTPREHLRFHANMRMS---RT-----------------------LSPEQKMQAVETALEGLGLGKCANTPIGGQGS--TIRGISGGEKKRLSFATEVLGDAPVIFVDEPTSGLDSFMAEAVVTKLRALAESGRTIVATIHQPSSHVFSLFSHLHLL-AEGKTIYCGPLDRANAHFE-AIGHPCPNFYNPADHYIKVMSRDPS-SFDESERRITAAADGYRQSAAYTQTEANLPTAVVTAARQEVKSGDREDDGATSARAAVVKPASHKVYQATWWRQAVEVYKRTIIMYRREPVLTKARLGQTVVVAVLVGLIFLQLGNSQRDVQSTMGVLFFVAINQGILGTIGVLQVFPNEMPVFLREHDSGAYRVSSYFFGRTLAEIPIQVVFPTVFSVIIYLLCGFPLEAKPFLLFIVYIVLTSNSAISLGYVVSAFAKSVDVALAVGPMILMPFIIFGGLLINLSEIPVYFMWYSIFSFIQYGYKAISIVIWESKESLDCPPEPEPCVFPTGQDVLDYLEFEGGNRELWLNFVYLVALMVGFRILAFFALLYRSRPT 579
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|971515294|dbj|GAQ82936.1| (ABC transporter G family [Klebsormidium nitens]) HSP 1 Score: 287.345 bits (734), Expect = 3.598e-84 Identity = 183/574 (31.88%), Postives = 307/574 (53.48%), Query Frame = 0 Query: 22 AVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNR---NFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELR--RMDALSLAYAQSFMKIQNPLPAD----DKHKALHDVR-GQGASDWVF-FKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASN--WRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSY-GPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAF 581 A ++ LEW ++ + +++ GKG A + TK IL+ ++G +G AI+GP+G+GKT+LL ++ R + DG + +G+ E F ++A+V Q D+LY LT +E LT A+ R LP KMS + RV+ +++ + L K +T+IG + F +G+SGGERKR IA E+L +IFLDEP+SGLDS + ++ +L L +GR +I+T+H P S Y LF +L+LL+ +G + Y GPA+QA++YF + G+ CPQH+NPADF ++ +S + P +E+ R+ L + ++ ++ P AD D K L D G+ AS W+ F++ LWR +Q +RDR+ L++ S ++ + G L+ + +N G+IF + F G ++ FP+E ++ RE ++ A V + A+ PL ++ +++YW G DAG + ++LI + + +G +S+ + P VA+ + P ++F G I +S+PV L WI ++S + +AF Sbjct: 54 AQTVRVSLEWRQLNYSIVVKK----GKGKAEEG-KVTKRILKNLSGTVRAGTFVAIMGPTGSGKTSLLNALAGRLQRVGTLDGEILVNGKPRENTFKRITAYVMQDDVLYSSLTVQETLTTAALLR-----------LPS---------------KMSPQKKMERVDSIVSELGLGKARNTIIGNA---FR-RGVSGGERKRANIAVEMLSNPSMIFLDEPTSGLDSFQALNVMSSLGALADKGRTIISTIHQPRSSIYALFEDLLLLS-EGEMIYFGPASQAVAYFDSK-GLTCPQHFNPADFFMDKISLDSRDPEREKESTGRVKMLQAEWQKNLPEV-TPAGADVTKGDLSKGLEDSSLGKYASSWILQFRVLLWRAFIQTSRDRLPLMIALVQSIVMSCIVGALFSTVGNDQKALQNRTGVIFFTTIFVAFNGVFQMITTFPVERAVIARERAANAYRVSAFYPAKVIAEWPLRVIATIIFVTVVYWIVGFQHDAGKFFRYLLIGIWEFTAMNGVGLLVSAIAPTPPVALALGPLVTVICMLFGGFYINLNSIPVALRWISNLSPIKWAF 589 The following BLAST results are available for this feature:
BLAST of EWM27919.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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