rna2756, rna2756 (mRNA) Nannochloropsis gaditana

Overview
Namerna2756
Unique Namerna2756
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length965
Alignment locationCM002459.1:1130956..1131598 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100285g1.3538.mrna
Orig protein idgnl|cribi|Naga_100285g1.3538
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1130956..1131598 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100285g1gene2637Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2756rna2756-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27917.1cds2748Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2756 ID=rna2756|Name=rna2756|organism=Nannochloropsis gaditana|type=mRNA|length=965bp
ACTACCCGTTCCACAATATTATGCCCGCGAGCGCACAAAACATGATATAT
TTACATCCTAACAAATTTTAATATCTCCTCAATCAAAGCGCTTGTCTTGG
CAGAAGCTGGTATGGCCCTCCGTCGCTGCCTTCCAAAATCCACAGCGGTC
TTGGCTGTGGTAGGACTCCTCAGTATGTGCCTGTCTCACAGCACCGCCTT
CATCCTTCCTGCTCGCACGCCTCAACCACCAAAGGCTACCAGCACAACTA
CTTCTACTAAATCCTTGGCCCCATCAAGGACCGATCCAATCTCAAGGAAC
CAAGTGAAATGGTACCGAGTAGCCTCTGTCCTTGCCCTTATCCTCCTTCC
CACTGCCCACAATTCCCCCGCCCATGCTTTCGACGCCAAGGGTGCCCGCC
TCTTTGAGAACAACTGTGCAAGTTGTCACGTAGCAGGCACAAATATCATT
GGATACGCTCGCGGGAAAACCCTGAAAGAAGAAGCCCTCAGCAAGTACAA
ATTTAACACGCGCGCCTCCATCGTCAACCTCTTAACGGAAGGAAAAGGTG
TCATGCCCAAGTACAGCAGCTACACGAGGAAGAACGGGGACGTGGTGCCG
GCAAAATTGACGGAACAAGAGATGGGGCAGGTGGCGGACTACGTCTTGGA
GCAGGCCAAGGCCGGATGGAAATGAGGGGAGGATGGAGGAATCCAGCCGC
GTGGGAGATTCCTCGTTCCCTCTTCACGAGTGCGCTGGGCGTGATTTTTG
AAAGGCTCGGTCGAAGCCTTGCCTTGTGTTGACGGTGCTCTGCCGAGATT
AAAAACTTGCAATGGCAGCGTCCGCTTTGGATGGAATCGCTGAAAGAAAT
AACGAGGGATGTCTGGCCGCAATGACCTGCATGCAACCCTACCGTGCCGT
GCCGGTCCACATTCCCGACCCCTTTGCTTTTCCTCCATGCAAGCGGCTCA
ATCCCTCCCTCCTCC
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protein sequence of rna2756

>rna2756-protein ID=rna2756-protein|Name=rna2756|organism=Nannochloropsis gaditana|type=polypeptide|length=157bp
PPLSLPPSLPHPARAKAFLDEGRSVVVDNTNIEAWEPREYVRHAIHLGVK
VEFVRAEGRYGNLHGVPAEKVEMMRARLERLTMDSVLNALAPAERREIEQ
ERGKEVLRDAGRISVRQGQWISFGGGGGRERGGGGGRDETSQEEALERAL
ALLKFGK
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mRNA from alignment at CM002459.1:1130956..1131598+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2756 ID=rna2756|Name=rna2756|organism=Nannochloropsis gaditana|type=mRNA|length=643bp|location=Sequence derived from alignment at CM002459.1:1130956..1131598+ (Nannochloropsis gaditana)
cctcctctctccctccctccctccctccctcatccagcCCGGGCCAAGGC
CTTCCTGGACGAAGGCCGGAGTGTGGTCGTCGACAACACGAACATCGAAG
CTTGGGAGCCCCGGGAATACGTGCGGCATGCCATCCATCTAGGGGTTAAA
GTGGAATTCGTGCGCGCTGAAGGTCGGTATGGCAACCTGCACGGGGTGCC
GGCCGAGAAGGTGGAAATGATGCGGGCGCGCCTGGAGAGGCTGACCATGG
ACAGCGTCTTGAACGCCTTGGCGCCCGCGGAGAGGCGAGAGATTGaacag
gagagggggaaggaggtgttgCGCGACGCAGGGCGGATCTCGGTGCGGCA
GGGGCAATGGATTTCTtttggtgggggaggaggaagagagaggggaggag
ggggagggagggacgagacAAGTCAAgaggaggcgttggaacGGGCATTG
GCTTTGCTGAAATTTGGGAAGTGACGTACGGATAGGGGGAGtagagaaga
aaagaagctgaggaggaaaacagaCTCCCTTGACCACGCATGCGTGTGCG
TCAGGCAACCGCATCGTGTTCGCCTCCCAGACAAACGCCTGAACCAGAAA
GCAAATCAAGCATGGTAACTCCCAGGTTTCTTCGTGTGAGCAG
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Coding sequence (CDS) from alignment at CM002459.1:1130956..1131598+

>rna2756 ID=rna2756|Name=rna2756|organism=Nannochloropsis gaditana|type=CDS|length=474bp|location=Sequence derived from alignment at CM002459.1:1130956..1131598+ (Nannochloropsis gaditana)
cctcctctctccctccctccctccctccctcatccagcCCGGGCCAAGGC
CTTCCTGGACGAAGGCCGGAGTGTGGTCGTCGACAACACGAACATCGAAG
CTTGGGAGCCCCGGGAATACGTGCGGCATGCCATCCATCTAGGGGTTAAA
GTGGAATTCGTGCGCGCTGAAGGTCGGTATGGCAACCTGCACGGGGTGCC
GGCCGAGAAGGTGGAAATGATGCGGGCGCGCCTGGAGAGGCTGACCATGG
ACAGCGTCTTGAACGCCTTGGCGCCCGCGGAGAGGCGAGAGATTGaacag
gagagggggaaggaggtgttgCGCGACGCAGGGCGGATCTCGGTGCGGCA
GGGGCAATGGATTTCTtttggtgggggaggaggaagagagaggggaggag
ggggagggagggacgagacAAGTCAAgaggaggcgttggaacGGGCATTG
GCTTTGCTGAAATTTGGGAAGTGA
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Synonyms
Publications