EWM27917.1, cds2748 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27917.1 vs. NCBI_GenBank
Match: gi|585110257|gb|EWM27917.1| (hypothetical protein Naga_100285g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 311.997 bits (798), Expect = 1.893e-107 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
Query: 1 PPLSLPPSLPHPARAKAFLDEGRSVVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYGNLHGVPAEKVEMMRARLERLTMDSVLNALAPAERREIEQERGKEVLRDAGRISVRQGQWISFGGGGGRERGGGGGRDETSQEEALERALALLKFGK 157
PPLSLPPSLPHPARAKAFLDEGRSVVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYGNLHGVPAEKVEMMRARLERLTMDSVLNALAPAERREIEQERGKEVLRDAGRISVRQGQWISFGGGGGRERGGGGGRDETSQEEALERALALLKFGK
Sbjct: 1 PPLSLPPSLPHPARAKAFLDEGRSVVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYGNLHGVPAEKVEMMRARLERLTMDSVLNALAPAERREIEQERGKEVLRDAGRISVRQGQWISFGGGGGRERGGGGGRDETSQEEALERALALLKFGK 157
BLAST of EWM27917.1 vs. NCBI_GenBank
Match: gi|1056061591|ref|WP_067587289.1| (ATP-binding protein [Endozoicomonas ascidiicola]) HSP 1 Score: 70.4774 bits (171), Expect = 1.402e-12 Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 0
Query: 13 ARAKAFLDEGRSVVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYGNLHGVPAEKVEMMRARLERLT 82
A+AK L+ G++VVV NT WE + Y+ A LG +V+ + A G Y N+HGVP EKVE MR R E T
Sbjct: 63 AKAKMSLNAGKNVVVANTFTRIWEMKPYLMMAKRLGCQVKVIEATGNYKNVHGVPDEKVEQMRERFENFT 132
BLAST of EWM27917.1 vs. NCBI_GenBank
Match: gi|1007731970|ref|XP_015806883.1| (PREDICTED: NEDD4-binding protein 2-like 2 [Nothobranchius furzeri]) HSP 1 Score: 68.5514 bits (166), Expect = 1.162e-10 Identity = 39/110 (35.45%), Postives = 65/110 (59.09%), Query Frame = 0
Query: 13 ARAKAFLDEGRS-VVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYG---------NLHGVPAEKVEMMRARLER-LTMDSVLNALAPA---ERREIEQERGKEVLR 108
+RA L++GRS V++DNTN++AWE + YV+ A+ G KV+F E + N HGVP EK++ M R +++D ++++ PA +RR EQ++ ++ R
Sbjct: 360 SRANNALNDGRSPVIIDNTNLQAWEMKPYVKMALERGYKVDFCEPETSWKFDPLELEKRNKHGVPQEKIKQMMDRFSSPVSIDIIMSSEEPAHVNQRRWSEQQQNRKKPR 469
BLAST of EWM27917.1 vs. NCBI_GenBank
Match: gi|972959965|ref|XP_015197485.1| (PREDICTED: NEDD4-binding protein 2-like 2 [Lepisosteus oculatus]) HSP 1 Score: 68.5514 bits (166), Expect = 1.422e-10 Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 0
Query: 14 RAKAFLDEGRS-VVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYG---------NLHGVPAEKVEMMRARLER-LTMDSVLNALAPAER 95
RA+ LD+GRS V++DNTN++AWE + YV A+ G +VEF + + N HGVP EK+ M R ER +++D VLN+ P +
Sbjct: 482 RAREALDQGRSPVIIDNTNLQAWEMKPYVELALERGYRVEFQEPDTSWKSDPLELEKRNKHGVPGEKISHMLERFERPVSVDIVLNSQEPTHK 574
BLAST of EWM27917.1 vs. NCBI_GenBank
Match: gi|782669282|ref|WP_045598499.1| (ATP-binding protein [Vibrio vulnificus] >gi|1039808418|gb|ANN26654.1| hypothetical protein FORC17_1591 [Vibrio vulnificus]) HSP 1 Score: 63.1586 bits (152), Expect = 6.026e-10 Identity = 26/66 (39.39%), Postives = 41/66 (62.12%), Query Frame = 0
Query: 14 RAKAFLDEGRSVVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYGNLHGVPAEKVEMMRARLE 79
+ +L +GR+V+V NT ++ WE + Y+R A G VE + G YG++H VPA+ +E MR R +
Sbjct: 64 KVCQYLKQGRTVIVSNTFVQHWEMKSYLRFAERHGFSVEILVCTGEYGSIHDVPAQTIEKMRQRWQ 129
BLAST of EWM27917.1 vs. NCBI_GenBank
Match: gi|823699778|ref|WP_047112052.1| (ATP-binding protein [Vibrio vulnificus] >gi|823482861|gb|KLI65904.1| ATPase AAA [Vibrio vulnificus CladeA-yb158] >gi|1111623771|gb|OJI34205.1| adenylylsulfate kinase [Vibrio vulnificus]) HSP 1 Score: 63.1586 bits (152), Expect = 6.559e-10 Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0
Query: 18 FLDEGRSVVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYGNLHGVPAEKVEMMRARLE 79
+L +GR+V+V NT ++ WE + Y+R A G VE + G YG++H VPA+ +E MR R +
Sbjct: 68 YLKQGRTVIVSNTFVQHWEMKSYLRFAERHGFSVEILVCTGEYGSIHDVPAQTIEKMRQRWQ 129
BLAST of EWM27917.1 vs. NCBI_GenBank
Match: gi|499393051|ref|WP_011080518.1| (ATP-binding protein [Vibrio vulnificus] >gi|27362168|gb|AAO11023.1| hypothetical protein VV1_2676 [Vibrio vulnificus CMCP6]) HSP 1 Score: 62.7734 bits (151), Expect = 8.826e-10 Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0
Query: 18 FLDEGRSVVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYGNLHGVPAEKVEMMRARLE 79
+L +GR+V+V NT ++ WE + Y+R A G VE + G YG++H VPA+ +E MR R +
Sbjct: 68 YLKQGRAVIVSNTFVQHWEMKSYLRFAERHGFSVEILVCTGEYGSIHDVPAQTIEKMRQRWQ 129
BLAST of EWM27917.1 vs. NCBI_GenBank
Match: gi|782753005|ref|WP_045629485.1| (ATP-binding protein [Vibrio vulnificus]) HSP 1 Score: 62.7734 bits (151), Expect = 9.111e-10 Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 0
Query: 6 PPSLPHPAR-----AKAFLDEGRSVVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYGNLHGVPAEKVEMMRARLE 79
P L H R +L +GR+V+V NT ++ WE + Y+R A G+ VE + G YG++H VPA+ +E MR R +
Sbjct: 51 PTRLEHAHRWCLNKVCQYLKQGRAVIVSNTFVQHWEMKPYLRFAERHGLSVEILVCTGEYGSIHDVPAQTIEKMRQRWQ 129
BLAST of EWM27917.1 vs. NCBI_GenBank
Match: gi|1209921919|ref|WP_088427701.1| (AAA family ATPase [Vibrio vulnificus] >gi|1209349298|gb|ASC57033.1| hypothetical protein FORC37_1339 [Vibrio vulnificus]) HSP 1 Score: 62.7734 bits (151), Expect = 9.306e-10 Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 0
Query: 6 PPSLPHPAR-----AKAFLDEGRSVVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYGNLHGVPAEKVEMMRARLE 79
P L H R +L +GR+V+V NT ++ WE + Y+R A G+ VE + G YG++H VPA+ +E MR R +
Sbjct: 51 PTRLEHAHRWCLNKVCQYLKQGRAVIVSNTFVQHWEMKPYLRFAERHGLSVEILVCTGEYGSIHAVPAQTIEKMRQRWQ 129
BLAST of EWM27917.1 vs. NCBI_GenBank
Match: gi|782711158|ref|WP_045614598.1| (ATP-binding protein [Vibrio vulnificus]) HSP 1 Score: 62.7734 bits (151), Expect = 9.709e-10 Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 0
Query: 6 PPSLPHPAR-----AKAFLDEGRSVVVDNTNIEAWEPREYVRHAIHLGVKVEFVRAEGRYGNLHGVPAEKVEMMRARLE 79
P L H R +L +GR+V+V NT ++ WE + Y+R A G+ VE + G YG++H VPA+ +E MR R +
Sbjct: 51 PTRLEHAHRWCLNKVCQYLKQGRAVIVSNTFVQHWEMKPYLRFAERHGLNVEILVCTGEYGSIHAVPAQTIEKMRQRWQ 129 The following BLAST results are available for this feature:
BLAST of EWM27917.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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