EWM27977.1, cds2679 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27977.1 vs. NCBI_GenBank
Match: gi|585110318|gb|EWM27977.1| (phosphatidate cytidylyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 988.793 bits (2555), Expect = 0.000e+0 Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 0
Query: 1 MPAETRGQRRRGVGRGAKSGSGEDEARHASRSATKDGYTGGVRGASADESSAIGSSSQNNDTTLGANGHAHHHSPHHVSTASARERTRSKIVTRVTFAIVLLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAAMEKKTPLFRTLQWSWFVAAMFYAHGDSIVKLLREDSLLGINDDDQPEKSLIYSSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAALAHLLGRASLPVKPIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIRHVPINYHRVWASVSALKRDDQVRIWEELGKYLER 480
MPAETRGQRRRGVGRGAKSGSGEDEARHASRSATKDGYTGGVRGASADESSAIGSSSQNNDTTLGANGHAHHHSPHHVSTASARERTRSKIVTRVTFAIVLLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAAMEKKTPLFRTLQWSWFVAAMFYAHGDSIVKLLREDSLLGINDDDQPEKSLIYSSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAALAHLLGRASLPVKPIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIRHVPINYHRVWASVSALKRDDQVRIWEELGKYLER
Sbjct: 1 MPAETRGQRRRGVGRGAKSGSGEDEARHASRSATKDGYTGGVRGASADESSAIGSSSQNNDTTLGANGHAHHHSPHHVSTASARERTRSKIVTRVTFAIVLLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAAMEKKTPLFRTLQWSWFVAAMFYAHGDSIVKLLREDSLLGINDDDQPEKSLIYSSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAALAHLLGRASLPVKPIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIRHVPINYHRVWASVSALKRDDQVRIWEELGKYLER 480
BLAST of EWM27977.1 vs. NCBI_GenBank
Match: gi|298710107|emb|CBJ31820.1| (phosphatidate cytidylyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 336.265 bits (861), Expect = 4.011e-109 Identity = 179/355 (50.42%), Postives = 234/355 (65.92%), Query Frame = 0
Query: 131 LVAVRYRAAMEKKTPLFRTLQWSWFVAAMFYAHGDSIVK-LLREDSLLGINDDDQPEKSLIYSSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAAL-----AHLLGR---ASLPVK--PIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIRHVPINYHRVWASVSALKRDDQVRIWEEL 474
+V+VRY AA E+ PLFRTLQWSWFV A+FY +GD + + +L+ +LL ++ L SF + +FVV+VLTL+ GLYKYQVGQL WT+V + +IV Q+K VA NIF+GIFW+FFPAS +I NDI AY CG++ GR+ IK+PFL++SPNKTWEGF+GAFFFT L+AF+FS FLA+F +FTC + L RP + PD VF V+P ++ A L R ASL V PIQ+H L++ F S++APFGG+ SAIKRAYGIKDFDS+IPGHGGVTDRMDCQ + L+ VHY TFIR + A+ + L +Q+ + +EL
Sbjct: 1 MVSVRYSAAKERDMPLFRTLQWSWFVVAIFYTYGDFLHEFVLKHRALLWLSHITMFNAWL---SFTAYCCVFVVSVLTLKKGLYKYQVGQLTWTIVTICMIVAQVKFVAHNIFNGIFWFFFPASLVICNDITAYFCGITAGRKLIKKPFLKISPNKTWEGFMGAFFFTCLFAFYFSAFLAKFEWFTCPVQDL---------NFRP---------KPIHCNPDAVFLPAEFVVPESVRWFMEAFLFFRLPVASLSVTLAPIQLHALLMAGFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTVEGLLAAATMLSHSEQMELLDEL 334
BLAST of EWM27977.1 vs. NCBI_GenBank
Match: gi|224012218|ref|XP_002294762.1| (phosphatidate cytidylytransferase-like protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220969782|gb|EED88122.1| phosphatidate cytidylytransferase-like protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 327.405 bits (838), Expect = 3.801e-105 Identity = 167/396 (42.17%), Postives = 254/396 (64.14%), Query Frame = 0
Query: 90 KIVTRVTFAIVLLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAA---MEKKTPLFRTLQWSWFVAAMFYAHGDSIVKLLREDSLL-GINDDDQPEKSLIYSSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQ----ELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAALAHLLGRA-SLPVKPIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIRHVPINYHRVWASVSALKRDDQVRIWEELGK 476
K++TR ++V+++VF I +GHVY+ + GIQV+LF+ELV VRY A +++ PLFRT QW WF ++FYA+ + +V++++ ++ L + + Q +L SF L++ FV+T+ T++ G K+Q+ QL WT+V+L L VGQLK + NI++G+ W+ P +I ND+MAY G++ GR+FI R F+ LSPNKTWEGFIG FT++ ++ SR+L++F + TC P+ +F W E FH+ A T P +VF +LP A+ HL ++ + PIQ+H + + +F SLVAPFGGFL SAIKRAYGIKDFDS+IPGHGG+ DR DCQ++M L T+VHY TF++ ++ ++ L D++ E++ +
Sbjct: 1 KLLTRSISSLVMISVFIAILLSGHVYVCAFIAGIQVLLFRELVTVRYNAYFDRIDRTIPLFRTTQWMWFFVSIFYAYSEFVVEIIKSNTKLHDLFEYAQLAPAL---SFTLYTGTFVLTIATMQTGHIKFQLNQLCWTIVVLCLTVGQLKYIMHNIYNGLIWFTLPILLVITNDVMAYFSGVTCGRKFIHRTFMELSPNKTWEGFIGGGVFTMIVGWYLSRWLSQFTWMTC------PTNQFVWMPGSLECEVENIFHE----ATTYFPSQVFE----LLPRAIIHLFPNVLAISIVPIQLHAISLSLFASLVAPFGGFLASAIKRAYGIKDFDSIIPGHGGLMDRFDCQMIMALCTWVHYNTFVKLTTVSVAKMLYMYKLLGEDERREFMEKITQ 379
BLAST of EWM27977.1 vs. NCBI_GenBank
Match: gi|695407545|ref|XP_009524404.1| (hypothetical protein PHYSODRAFT_557610 [Phytophthora sojae] >gi|348681871|gb|EGZ21687.1| hypothetical protein PHYSODRAFT_557610 [Phytophthora sojae]) HSP 1 Score: 328.176 bits (840), Expect = 6.015e-105 Identity = 171/359 (47.63%), Postives = 230/359 (64.07%), Query Frame = 0
Query: 89 SKIVTRVTFAIVLLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAAMEKKTPLFRTLQWSWFVAAMFYAHGDSIVKLLREDSLLGINDDD-QPEKSLIYSSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAALAHLLGRASLPVKPIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIR 446
+K +TRV ++ F I + GH+Y + LV +Q +LF+ELV VRYRAA EK P FR++QW WFV A+FY +GDS + + + + + SF +++ LFV++VL+L+ G YKYQ+GQ WT+V L LIV Q+K V NIF+G+FW+FFP S +I ND A+ CG GR+FIK PFLRLSPNKTWEGFIGAF T+++AF+ S F+A+F + C P E F ++ L P T P+ VF +PA LA L+GR + + PIQ+H + IF S+V+PFGGF SAIKR Y +KDFDS+IPGHGGV DRMDCQL+ +T V++ TFIR
Sbjct: 36 TKFMTRVVAGFAMIGGFIAILYGGHMYAWGLVVVLQTLLFRELVNVRYRAAAEKNIPWFRSVQWMWFVVALFYNYGDSFGAFIESRKIRFVPPAIVHYLRYHTWVSFTMYAMLFVMSVLSLKKGYYKYQMGQYTWTIVTLGLIVFQMKYVLTNIFNGLFWFFFPVSLVICNDCFAFFCGKLFGRKFIKTPFLRLSPNKTWEGFIGAFICTIIYAFFSSAFIAQFSWIIC------PVESFEFK-LIPDPL---------TCTPNDVFLPHFYDVPAFLARLIGRGQIQLLPIQLHSVWFAIFASVVSPFGGFYASAIKRTYNLKDFDSVIPGHGGVMDRMDCQLITNCFTTVYFNTFIR 378
BLAST of EWM27977.1 vs. NCBI_GenBank
Match: gi|567990581|gb|ETL40809.1| (hypothetical protein, variant 5 [Phytophthora parasitica]) HSP 1 Score: 329.331 bits (843), Expect = 8.427e-105 Identity = 183/453 (40.40%), Postives = 256/453 (56.51%), Query Frame = 0
Query: 56 SSQNNDTTLGANGHAHHHSPHHVSTASARERTRS-----------------------KIVTRVTFAIVLLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAAMEKKTPLFRTLQWSWFVAAMFYAHGDSIVKLLREDSLLGINDDDQPEKSLIY------SSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAALAHLLGRASLPVKPIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIRHVPINYHRVWASVSALKRDDQVRIWEELGKYLE 479
+SQNN P ST S R+R S K +TRV ++ F I + GH+Y++ LV +Q ++F+ELV VRYRAA EK P FR++QW WFV A+FY +GDS+ + + + P + Y SF +++ LFV++VL+L+ G YKYQ+GQ WT+V L LIV Q+K V NIF+G+FW+ FP S +I ND A+ CG GR+FIK PFLRLSPNKTWEGFIGAF T+++AF+ S F+++F + TC P E F ++ L P T P VF +P ++A ++G++ + + PIQ+H IF S+V+PFGGF SAIKR Y +KDFDS+IPGHGGV DRMDCQL+ +T V++ TFIR + + VS L + + + + + LE
Sbjct: 27 TSQNNGKNEKQQSRHFQEHPVADSTMSLRKRRSSPDGGNPEKMPAPPPPAPKTGGLTKFMTRVIVGFAMIGGFIAIVYGGHMYVWGLVVVLQTLIFRELVNVRYRAAAEKNIPWFRSVQWMWFVVALFYNYGDSLGAFIESSKIRFV-----PPAIVHYLRYHTWVSFTMYAMLFVMSVLSLKKGYYKYQMGQYTWTIVTLGLIVFQMKYVLTNIFNGLFWFLFPVSLVICNDCFAFFCGKLFGRKFIKTPFLRLSPNKTWEGFIGAFICTVIYAFFSSAFISQFSWLTC------PVESFEFK-LIPDPL---------TCIPHDVFLPHFYDVPVSIARIIGQSQIQLLPIQLHSFWFAIFASVVSPFGGFYASAIKRTYKLKDFDSVIPGHGGVMDRMDCQLITNCFTTVYFNTFIRSPTPSVAMILNLVSQLTVNQKQDVLRAIQEMLE 458
BLAST of EWM27977.1 vs. NCBI_GenBank
Match: gi|675192533|ref|XP_008905151.1| (hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >gi|566024558|gb|ETI47469.1| hypothetical protein, variant 4 [Phytophthora parasitica P1569] >gi|567961854|gb|ETK87391.1| hypothetical protein, variant 4 [Phytophthora parasitica] >gi|568019800|gb|ETL93941.1| hypothetical protein, variant 4 [Phytophthora parasitica] >gi|568050251|gb|ETM47206.1| hypothetical protein, variant 5 [Phytophthora parasitica] >gi|568094542|gb|ETN09318.1| hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >gi|570328219|gb|ETO76167.1| hypothetical protein, variant 4 [Phytophthora parasitica P1976] >gi|570951994|gb|ETP17251.1| hypothetical protein, variant 4 [Phytophthora parasitica CJ01A1] >gi|570986190|gb|ETP45292.1| hypothetical protein, variant 5 [Phytophthora parasitica P10297]) HSP 1 Score: 329.331 bits (843), Expect = 8.894e-105 Identity = 183/453 (40.40%), Postives = 256/453 (56.51%), Query Frame = 0
Query: 56 SSQNNDTTLGANGHAHHHSPHHVSTASARERTRS-----------------------KIVTRVTFAIVLLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAAMEKKTPLFRTLQWSWFVAAMFYAHGDSIVKLLREDSLLGINDDDQPEKSLIY------SSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAALAHLLGRASLPVKPIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIRHVPINYHRVWASVSALKRDDQVRIWEELGKYLE 479
+SQNN P ST S R+R S K +TRV ++ F I + GH+Y++ LV +Q ++F+ELV VRYRAA EK P FR++QW WFV A+FY +GDS+ + + + P + Y SF +++ LFV++VL+L+ G YKYQ+GQ WT+V L LIV Q+K V NIF+G+FW+ FP S +I ND A+ CG GR+FIK PFLRLSPNKTWEGFIGAF T+++AF+ S F+++F + TC P E F ++ L P T P VF +P ++A ++G++ + + PIQ+H IF S+V+PFGGF SAIKR Y +KDFDS+IPGHGGV DRMDCQL+ +T V++ TFIR + + VS L + + + + + LE
Sbjct: 27 TSQNNGKNEKQQSRHFQEHPVADSTMSLRKRRSSPDGGNPEKMPAPPPPAPKTGGLTKFMTRVIVGFAMIGGFIAIVYGGHMYVWGLVVVLQTLIFRELVNVRYRAAAEKNIPWFRSVQWMWFVVALFYNYGDSLGAFIESSKIRFV-----PPAIVHYLRYHTWVSFTMYAMLFVMSVLSLKKGYYKYQMGQYTWTIVTLGLIVFQMKYVLTNIFNGLFWFLFPVSLVICNDCFAFFCGKLFGRKFIKTPFLRLSPNKTWEGFIGAFICTVIYAFFSSAFISQFSWLTC------PVESFEFK-LIPDPL---------TCIPHDVFLPHFYDVPVSIARIIGQSQIQLLPIQLHSFWFAIFASVVSPFGGFYASAIKRTYKLKDFDSVIPGHGGVMDRMDCQLITNCFTTVYFNTFIRSPTPSVAMILNLVSQLTVNQKQDVLRAIQEMLE 458
BLAST of EWM27977.1 vs. NCBI_GenBank
Match: gi|1214707490|gb|OWZ18887.1| (Phosphatidate cytidylyltransferase [Phytophthora megakarya]) HSP 1 Score: 326.635 bits (836), Expect = 2.050e-104 Identity = 173/390 (44.36%), Postives = 243/390 (62.31%), Query Frame = 0
Query: 89 SKIVTRVTFAIVLLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAAMEKKTPLFRTLQWSWFVAAMFYAHGDSIVKLLREDSLLGINDDD-QPEKSLIYSSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAALAHLLGRASLPVKPIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIRHVPINYHRVWASVSAL---KRDDQVRIWEEL 474
+K +TRV ++ F I + GH+Y + LV +Q +LF+ELV VRYRAA EK P FR++QW WFV A+FY +GDS + + + + + SF +++ LFV++VL+L+ G YKYQ+GQ WT+V L LIV Q+K V NIF+G+FW+ FP S +I ND A+ CG GR+FIK PFLRLSPNKTWEGFIGAF T+++AF+ S F+++F + TC P E F ++ L P T P VF +P ++A L+GR+ + + PIQ+H + IF S+V+PFGGF SAIKR Y +KDFDS+IPGHGGV DRMDCQL+ +T V++ TFIR + + V+ L ++ D +R +E+
Sbjct: 31 TKFMTRVVVGFAMIGGFIAILYGGHMYAWGLVVVLQTLLFRELVNVRYRAAAEKNIPWFRSVQWMWFVVALFYNYGDSFGAFIESSKIRFVPPAIVHYLRYHTWVSFTMYAMLFVMSVLSLKKGYYKYQMGQYTWTIVTLGLIVFQMKYVLTNIFNGLFWFLFPVSLVICNDCFAFFCGKLFGRKFIKTPFLRLSPNKTWEGFIGAFLCTIIYAFFSSAFISQFSWLTC------PVESFEFK-LIPDPL---------TCTPRDVFLPHFYDIPVSIARLVGRSQIQLLPIQLHSIWFAIFASVVSPFGGFYASAIKRTYNLKDFDSVIPGHGGVMDRMDCQLITNTFTTVYFNTFIRSPTPSVAMILNLVAQLTLEQKQDVLRAIQEM 404
BLAST of EWM27977.1 vs. NCBI_GenBank
Match: gi|568050253|gb|ETM47208.1| (hypothetical protein, variant 7 [Phytophthora parasitica] >gi|570986192|gb|ETP45294.1| hypothetical protein, variant 7 [Phytophthora parasitica P10297]) HSP 1 Score: 327.405 bits (838), Expect = 2.336e-104 Identity = 178/421 (42.28%), Postives = 245/421 (58.19%), Query Frame = 0
Query: 56 SSQNNDTTLGANGHAHHHSPHHVSTASARERTRS-----------------------KIVTRVTFAIVLLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAAMEKKTPLFRTLQWSWFVAAMFYAHGDSIVKLLREDSLLGINDDDQPEKSLIY------SSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAALAHLLGRASLPVKPIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIRH 447
+SQNN P ST S R+R S K +TRV ++ F I + GH+Y++ LV +Q ++F+ELV VRYRAA EK P FR++QW WFV A+FY +GDS+ + + + P + Y SF +++ LFV++VL+L+ G YKYQ+GQ WT+V L LIV Q+K V NIF+G+FW+ FP S +I ND A+ CG GR+FIK PFLRLSPNKTWEGFIGAF T+++AF+ S F+++F + TC P E F ++ L P T P VF +P ++A ++G++ + + PIQ+H IF S+V+PFGGF SAIKR Y +KDFDS+IPGHGGV DRMDCQL+ +T V++ TFIR+
Sbjct: 27 TSQNNGKNEKQQSRHFQEHPVADSTMSLRKRRSSPDGGNPEKMPAPPPPAPKTGGLTKFMTRVIVGFAMIGGFIAIVYGGHMYVWGLVVVLQTLIFRELVNVRYRAAAEKNIPWFRSVQWMWFVVALFYNYGDSLGAFIESSKIRFV-----PPAIVHYLRYHTWVSFTMYAMLFVMSVLSLKKGYYKYQMGQYTWTIVTLGLIVFQMKYVLTNIFNGLFWFLFPVSLVICNDCFAFFCGKLFGRKFIKTPFLRLSPNKTWEGFIGAFICTVIYAFFSSAFISQFSWLTC------PVESFEFK-LIPDPL---------TCIPHDVFLPHFYDVPVSIARIIGQSQIQLLPIQLHSFWFAIFASVVSPFGGFYASAIKRTYKLKDFDSVIPGHGGVMDRMDCQLITNCFTTVYFNTFIRY 426
BLAST of EWM27977.1 vs. NCBI_GenBank
Match: gi|566024561|gb|ETI47472.1| (hypothetical protein, variant 7 [Phytophthora parasitica P1569] >gi|567961857|gb|ETK87394.1| hypothetical protein, variant 7 [Phytophthora parasitica] >gi|568019803|gb|ETL93944.1| hypothetical protein, variant 7 [Phytophthora parasitica] >gi|570328222|gb|ETO76170.1| hypothetical protein, variant 7 [Phytophthora parasitica P1976] >gi|570951997|gb|ETP17254.1| hypothetical protein, variant 7 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 327.02 bits (837), Expect = 3.064e-104 Identity = 178/421 (42.28%), Postives = 245/421 (58.19%), Query Frame = 0
Query: 56 SSQNNDTTLGANGHAHHHSPHHVSTASARERTRS-----------------------KIVTRVTFAIVLLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAAMEKKTPLFRTLQWSWFVAAMFYAHGDSIVKLLREDSLLGINDDDQPEKSLIY------SSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAALAHLLGRASLPVKPIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIRH 447
+SQNN P ST S R+R S K +TRV ++ F I + GH+Y++ LV +Q ++F+ELV VRYRAA EK P FR++QW WFV A+FY +GDS+ + + + P + Y SF +++ LFV++VL+L+ G YKYQ+GQ WT+V L LIV Q+K V NIF+G+FW+ FP S +I ND A+ CG GR+FIK PFLRLSPNKTWEGFIGAF T+++AF+ S F+++F + TC P E F ++ L P T P VF +P ++A ++G++ + + PIQ+H IF S+V+PFGGF SAIKR Y +KDFDS+IPGHGGV DRMDCQL+ +T V++ TFIR+
Sbjct: 27 TSQNNGKNEKQQSRHFQEHPVADSTMSLRKRRSSPDGGNPEKMPAPPPPAPKTGGLTKFMTRVIVGFAMIGGFIAIVYGGHMYVWGLVVVLQTLIFRELVNVRYRAAAEKNIPWFRSVQWMWFVVALFYNYGDSLGAFIESSKIRFV-----PPAIVHYLRYHTWVSFTMYAMLFVMSVLSLKKGYYKYQMGQYTWTIVTLGLIVFQMKYVLTNIFNGLFWFLFPVSLVICNDCFAFFCGKLFGRKFIKTPFLRLSPNKTWEGFIGAFICTVIYAFFSSAFISQFSWLTC------PVESFEFK-LIPDPL---------TCIPHDVFLPHFYDVPVSIARIIGQSQIQLLPIQLHSFWFAIFASVVSPFGGFYASAIKRTYKLKDFDSVIPGHGGVMDRMDCQLITNCFTTVYFNTFIRY 426
BLAST of EWM27977.1 vs. NCBI_GenBank
Match: gi|675192537|ref|XP_008905153.1| (hypothetical protein, variant 7 [Phytophthora parasitica INRA-310] >gi|568094544|gb|ETN09320.1| hypothetical protein, variant 7 [Phytophthora parasitica INRA-310]) HSP 1 Score: 326.635 bits (836), Expect = 4.466e-104 Identity = 178/420 (42.38%), Postives = 244/420 (58.10%), Query Frame = 0
Query: 56 SSQNNDTTLGANGHAHHHSPHHVSTASARERTRS-----------------------KIVTRVTFAIVLLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAAMEKKTPLFRTLQWSWFVAAMFYAHGDSIVKLLREDSLLGINDDDQPEKSLIY------SSFALFSTLFVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFFPASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLWAFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQPDRVFTQTTVVLPAALAHLLGRASLPVKPIQMHGLVIGIFGSLVAPFGGFLMSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIR 446
+SQNN P ST S R+R S K +TRV ++ F I + GH+Y++ LV +Q ++F+ELV VRYRAA EK P FR++QW WFV A+FY +GDS+ + + + P + Y SF +++ LFV++VL+L+ G YKYQ+GQ WT+V L LIV Q+K V NIF+G+FW+ FP S +I ND A+ CG GR+FIK PFLRLSPNKTWEGFIGAF T+++AF+ S F+++F + TC P E F ++ L P T P VF +P ++A ++G++ + + PIQ+H IF S+V+PFGGF SAIKR Y +KDFDS+IPGHGGV DRMDCQL+ +T V++ TFIR
Sbjct: 27 TSQNNGKNEKQQSRHFQEHPVADSTMSLRKRRSSPDGGNPEKMPAPPPPAPKTGGLTKFMTRVIVGFAMIGGFIAIVYGGHMYVWGLVVVLQTLIFRELVNVRYRAAAEKNIPWFRSVQWMWFVVALFYNYGDSLGAFIESSKIRFV-----PPAIVHYLRYHTWVSFTMYAMLFVMSVLSLKKGYYKYQMGQYTWTIVTLGLIVFQMKYVLTNIFNGLFWFLFPVSLVICNDCFAFFCGKLFGRKFIKTPFLRLSPNKTWEGFIGAFICTVIYAFFSSAFISQFSWLTC------PVESFEFK-LIPDPL---------TCIPHDVFLPHFYDVPVSIARIIGQSQIQLLPIQLHSFWFAIFASVVSPFGGFYASAIKRTYKLKDFDSVIPGHGGVMDRMDCQLITNCFTTVYFNTFIR 425 The following BLAST results are available for this feature:
BLAST of EWM27977.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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